Author: Søren M Karst
- ORCiD: http://orcid.org/0000-0002-0233-160X
- Most recently observed institution: Center for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University
Rankings
- All-time downloads: 28,306 (rank: 5,083 )
- Categories:
- bioinformatics: 5,043 (rank: 2,240 (tie) )
- ecology: 3,544 (rank: 428 (tie) )
- microbiology: 7,394 (rank: 1,581 )
- molecular biology: 12,325 (rank: 153 (tie) )
Downloads per author, site-wide
Preprints
Enabling high-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing
molecular biology more details view paper- Downloaded 12,325 times
- Download rankings, all-time:
- Site-wide: 555
- In molecular biology: 8
- Year to date:
- Site-wide: 678
- Since beginning of last month:
- Site-wide: 678
Thousands of primer-free, high-quality, full-length SSU rRNA sequences from all domains of life
ecology more details view paper- Downloaded 3,544 times
- Download rankings, all-time:
- Site-wide: 3,032
- In ecology: 27
- Year to date:
- Site-wide: 47,957
- Since beginning of last month:
- Site-wide: 47,957
ampvis2: an R package to analyse and visualise 16S rRNA amplicon data
bioinformatics more details view paper- Downloaded 3,421 times
- Download rankings, all-time:
- Site-wide: 3,200
- In bioinformatics: 330
- Year to date:
- Site-wide: 4,557
- Since beginning of last month:
- Site-wide: 4,557
Generation of comprehensive ecosystems-specific reference databases with species-level resolution by high-throughput full-length 16S rRNA gene sequencing and automated taxonomy assignment (AutoTax)
microbiology more details view paper- Downloaded 2,525 times
- Download rankings, all-time:
- Site-wide: 4,926
- In microbiology: 289
- Year to date:
- Site-wide: 12,726
- Since beginning of last month:
- Site-wide: 12,726
Connecting structure to function with the recovery of over 1000 high-quality activated sludge metagenome-assembled genomes encoding full-length rRNA genes using long-read sequencing
microbiology more details view paper- Downloaded 1,879 times
- Download rankings, all-time:
- Site-wide: 7,612
- In microbiology: 418
- Year to date:
- Site-wide: 5,534
- Since beginning of last month:
- Site-wide: 5,534
Identifying the abundant and active microorganisms common to full scale anaerobic digesters
microbiology more details view paper- Downloaded 1,721 times
- Download rankings, all-time:
- Site-wide: 8,717
- In microbiology: 487
- Year to date:
- Site-wide: 28,351
- Since beginning of last month:
- Site-wide: 28,351
mmgenome: a toolbox for reproducible genome extraction from metagenomes
bioinformatics more details view paper- Downloaded 1,622 times
- Download rankings, all-time:
- Site-wide: 9,539
- In bioinformatics: 1,171
- Year to date:
- Site-wide: 76,399
- Since beginning of last month:
- Site-wide: 76,399
Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira
microbiology more details view paper- Downloaded 650 times
- Download rankings, all-time:
- Site-wide: 35,853
- In microbiology: 2,135
- Year to date:
- Site-wide: 44,676
- Since beginning of last month:
- Site-wide: 44,676
Novel prosthecate bacteria from the candidate phylum Acetothermia revealed by culture-independent genomics and advanced microscopy
microbiology more details view paper- Downloaded 619 times
- Download rankings, all-time:
- Site-wide: 38,162
- In microbiology: 2,306
- Year to date:
- Site-wide: 115,654
- Since beginning of last month:
- Site-wide: 115,654
PanLingua
News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!