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Author: Rasmus H. Kirkegaard

Rankings

  • All-time downloads: 20,986 (rank: 2,578 out of 381,542)
  • Categories:
    • bioinformatics: 4,165 (rank: 2,234 (tie) out of 32,727)
    • ecology: 3,448 (rank: 308 (tie) out of 16,411)
    • microbiology: 5,120 (rank: 1,277 out of 42,807)
    • molecular biology: 8,253 (rank: 179 (tie) out of 19,782)

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Preprints

Enabling high-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing

molecular biology more details view paper
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Thousands of primer-free, high-quality, full-length SSU rRNA sequences from all domains of life

ecology more details view paper
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    • In ecology: 21 out of 3,902
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    • Site-wide: 48,532 out of 89,008
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    • Site-wide: 28,534 out of 89,008

ampvis2: an R package to analyse and visualise 16S rRNA amplicon data

bioinformatics more details view paper
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Identifying the abundant and active microorganisms common to full scale anaerobic digesters

microbiology more details view paper
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    • Site-wide: 15,474 out of 89,008

mmgenome: a toolbox for reproducible genome extraction from metagenomes

bioinformatics more details view paper
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    • Site-wide: 5,891 out of 89,008
    • In bioinformatics: 1,056 out of 8,407
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Connecting structure to function with the recovery of over 1000 high-quality activated sludge metagenome-assembled genomes encoding full-length rRNA genes using long-read sequencing

microbiology more details view paper
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    • In microbiology: 570 out of 7,649
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    • Site-wide: 1,278 out of 89,008

Cultivation and genomic analysis of Candidatus Nitrosocaldus islandicus, a novel obligately thermophilic ammonia-oxidizing Thaumarchaeon

microbiology more details view paper
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    • In microbiology: 1,100 out of 7,649
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    • Site-wide: 55,142 out of 89,008

Unlinked rRNA genes are widespread among Bacteria and Archaea

microbiology more details view paper
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    • In microbiology: 1,375 out of 7,649
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    • Site-wide: 34,310 out of 89,008

Novel prosthecate bacteria from the candidate phylum Acetothermia revealed by culture-independent genomics and advanced microscopy

microbiology more details view paper
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    • In microbiology: 1,697 out of 7,649
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    • Site-wide: 56,046 out of 89,008
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    • Site-wide: 46,513 out of 89,008

The signal and the noise - characteristics of antisense RNA in complex microbial communities

microbiology more details view paper
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    • Site-wide: 68,736 out of 89,008
    • In microbiology: 5,398 out of 7,649
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  • Since beginning of last month:
    • Site-wide: 76,476 out of 89,008

Genomic and kinetic analysis of novel Nitrospinae enriched by cell sorting

microbiology more details view paper
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    • Site-wide: 75,950 out of 89,008
    • In microbiology: 6,142 out of 7,649
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    • Site-wide: 1,917 out of 89,008

Characterizing the growing microorganisms at species level in 46 anaerobic digesters at Danish wastewater treatment plants: A six-year survey on microbiome structure and key drivers

microbiology more details view paper
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    • Site-wide: 76,106 out of 89,008
    • In microbiology: 6,167 out of 7,649
  • Year to date:
    • Site-wide: 22,088 out of 89,008
  • Since beginning of last month:
    • Site-wide: 1,935 out of 89,008

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