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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 60,222 bioRxiv papers from 267,720 authors.

Author: Sohrab P Shah

Rankings

  • All-time downloads: 19,280 (rank: 1,254 out of 267,720)
  • Categories:
    • bioinformatics: 8,182 (rank: 391 out of 23,843)
    • cancer biology: 4,001 (rank: 265 out of 16,249)
    • genomics: 7,097 (rank: 1,484 out of 31,247)

Downloads per author, site-wide

Preprints

Resource: Scalable whole genome sequencing of 40,000 single cells identifies stochastic aneuploidies, genome replication states and clonal repertoires

genomics more details view paper
  • Downloaded 3,548 times
  • Download rankings, all-time:
    • Site-wide: 770 out of 60,222
    • In genomics: 200 out of 4,168
  • Year to date:
    • Site-wide: 512 out of 60,222
  • Since beginning of last month:
    • Site-wide: 1,093 out of 60,222

Dissociation of solid tumour tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase associated stress responses

genomics more details view paper
  • Downloaded 3,138 times
  • Download rankings, all-time:
    • Site-wide: 956 out of 60,222
    • In genomics: 242 out of 4,168
  • Year to date:
    • Site-wide: 141 out of 60,222
  • Since beginning of last month:
    • Site-wide: 678 out of 60,222

Probabilistic cell type assignment of single-cell transcriptomic data reveals spatiotemporal microenvironment dynamics in human cancers

bioinformatics more details view paper
  • Downloaded 3,136 times
  • Download rankings, all-time:
    • Site-wide: 957 out of 60,222
    • In bioinformatics: 192 out of 6,078
  • Year to date:
    • Site-wide: 143 out of 60,222
  • Since beginning of last month:
    • Site-wide: 512 out of 60,222

Interpretable dimensionality reduction of single cell transcriptome data with deep generative models

bioinformatics more details view paper
  • Downloaded 1,736 times
  • Download rankings, all-time:
    • Site-wide: 2,748 out of 60,222
    • In bioinformatics: 552 out of 6,078
  • Year to date:
    • Site-wide: 29,883 out of 60,222
  • Since beginning of last month:
    • Site-wide: 44,012 out of 60,222

clonealign: statistical integration of independent single-cell RNA & DNA-seq from human cancers

bioinformatics more details view paper
  • Downloaded 1,597 times
  • Download rankings, all-time:
    • Site-wide: 3,144 out of 60,222
    • In bioinformatics: 639 out of 6,078
  • Year to date:
    • Site-wide: 4,236 out of 60,222
  • Since beginning of last month:
    • Site-wide: 26,563 out of 60,222

The interface of malignant and immunologic clonal dynamics in high-grade serous ovarian cancer

cancer biology more details view paper
  • Downloaded 1,459 times
  • Download rankings, all-time:
    • Site-wide: 3,662 out of 60,222
    • In cancer biology: 89 out of 1,975
  • Year to date:
    • Site-wide: 38,076 out of 60,222
  • Since beginning of last month:
    • Site-wide: 50,434 out of 60,222

Integrated single-nucleotide and structural variation signatures of DNA-repair deficient human cancers

cancer biology more details view paper
  • Downloaded 1,227 times
  • Download rankings, all-time:
    • Site-wide: 4,850 out of 60,222
    • In cancer biology: 126 out of 1,975
  • Year to date:
    • Site-wide: 12,520 out of 60,222
  • Since beginning of last month:
    • Site-wide: 24,426 out of 60,222

Kronos: a workflow assembler for genome analytics and informatics

bioinformatics more details view paper
  • Downloaded 1,218 times
  • Download rankings, all-time:
    • Site-wide: 4,904 out of 60,222
    • In bioinformatics: 962 out of 6,078
  • Year to date:
    • Site-wide: 40,739 out of 60,222
  • Since beginning of last month:
    • Site-wide: 52,823 out of 60,222

E-scape: Interactive visualization of single cell phylogenetics and spatio-temporal evolution in cancer

cancer biology more details view paper
  • Downloaded 853 times
  • Download rankings, all-time:
    • Site-wide: 8,749 out of 60,222
    • In cancer biology: 239 out of 1,975
  • Year to date:
    • Site-wide: 28,275 out of 60,222
  • Since beginning of last month:
    • Site-wide: 23,778 out of 60,222

MuClone: Somatic mutation detection and classification through probabilistic integration of clonal population structure

bioinformatics more details view paper
  • Downloaded 495 times
  • Download rankings, all-time:
    • Site-wide: 18,647 out of 60,222
    • In bioinformatics: 2,784 out of 6,078
  • Year to date:
    • Site-wide: 33,116 out of 60,222
  • Since beginning of last month:
    • Site-wide: 47,900 out of 60,222

Non-coding Somatic Mutations Converge on the PAX8 Pathway in Epithelial Ovarian Cancer

cancer biology more details view paper
  • Downloaded 462 times
  • Download rankings, all-time:
    • Site-wide: 20,227 out of 60,222
    • In cancer biology: 610 out of 1,975
  • Year to date:
    • Site-wide: 4,887 out of 60,222
  • Since beginning of last month:
    • Site-wide: 10,754 out of 60,222

Enhancing Knowledge Discovery from Cancer Genomics Data with Galaxy

genomics more details view paper
  • Downloaded 411 times
  • Download rankings, all-time:
    • Site-wide: 23,135 out of 60,222
    • In genomics: 2,528 out of 4,168
  • Year to date:
    • Site-wide: 52,016 out of 60,222
  • Since beginning of last month:
    • Site-wide: 53,540 out of 60,222

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