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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 54,824 bioRxiv papers from 253,087 authors.

Author: Sohrab P Shah

Rankings

  • All-time downloads: 11,058 (rank: 2,671 out of 253,087)
  • Categories:
    • bioinformatics: 7,396 (rank: 417 out of 21,949)
    • cancer biology: 2,577 (rank: 517 out of 13,963)
    • genomics: 1,085 (rank: 10,379 (tie) out of 28,620)

Downloads per author, site-wide

Preprints

Dissociation of solid tumour tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase associated stress responses

genomics more details view paper

No bioRxiv download data for this paper yet.

Probabilistic cell type assignment of single-cell transcriptomic data reveals spatiotemporal microenvironment dynamics in human cancers

bioinformatics more details view paper
  • Downloaded 2,401 times
  • Download rankings, all-time:
    • Site-wide: 1,368 out of 54,824
    • In bioinformatics: 276 out of 5,681
  • Year to date:
    • Site-wide: 129 out of 54,824
  • Since beginning of last month:
    • Site-wide: 1,664 out of 54,824

Interpretable dimensionality reduction of single cell transcriptome data with deep generative models

bioinformatics more details view paper
  • Downloaded 1,707 times
  • Download rankings, all-time:
    • Site-wide: 2,453 out of 54,824
    • In bioinformatics: 508 out of 5,681
  • Year to date:
    • Site-wide: 24,740 out of 54,824
  • Since beginning of last month:
    • Site-wide: 28,627 out of 54,824

clonealign: statistical integration of independent single-cell RNA & DNA-seq from human cancers

bioinformatics more details view paper
  • Downloaded 1,553 times
  • Download rankings, all-time:
    • Site-wide: 2,875 out of 54,824
    • In bioinformatics: 578 out of 5,681
  • Year to date:
    • Site-wide: 2,832 out of 54,824
  • Since beginning of last month:
    • Site-wide: 11,220 out of 54,824

The interface of malignant and immunologic clonal dynamics in high-grade serous ovarian cancer

cancer biology more details view paper
  • Downloaded 1,439 times
  • Download rankings, all-time:
    • Site-wide: 3,249 out of 54,824
    • In cancer biology: 83 out of 1,769
  • Year to date:
    • Site-wide: 30,492 out of 54,824
  • Since beginning of last month:
    • Site-wide: 13,389 out of 54,824

Kronos: a workflow assembler for genome analytics and informatics

bioinformatics more details view paper
  • Downloaded 1,185 times
  • Download rankings, all-time:
    • Site-wide: 4,461 out of 54,824
    • In bioinformatics: 893 out of 5,681
  • Year to date:
    • Site-wide: 38,048 out of 54,824
  • Since beginning of last month:
    • Site-wide: 40,249 out of 54,824

E-scape: Interactive visualization of single cell phylogenetics and spatio-temporal evolution in cancer

cancer biology more details view paper
  • Downloaded 814 times
  • Download rankings, all-time:
    • Site-wide: 8,126 out of 54,824
    • In cancer biology: 212 out of 1,769
  • Year to date:
    • Site-wide: 25,396 out of 54,824
  • Since beginning of last month:
    • Site-wide: 7,430 out of 54,824

Epiclomal: probabilistic clustering of sparse single-cell DNA methylation data

genomics more details view paper
  • Downloaded 688 times
  • Download rankings, all-time:
    • Site-wide: 10,360 out of 54,824
    • In genomics: 1,490 out of 3,886
  • Year to date:
    • Site-wide: 5,177 out of 54,824
  • Since beginning of last month:
    • Site-wide: 11,836 out of 54,824

deStruct: Accurate Rearrangement Detection using Breakpoint Specific Realignment

bioinformatics more details view paper
  • Downloaded 550 times
  • Download rankings, all-time:
    • Site-wide: 13,992 out of 54,824
    • In bioinformatics: 2,251 out of 5,681
  • Year to date:
    • Site-wide: 34,806 out of 54,824
  • Since beginning of last month:
    • Site-wide: 47,239 out of 54,824

Enhancing Knowledge Discovery from Cancer Genomics Data with Galaxy

genomics more details view paper
  • Downloaded 397 times
  • Download rankings, all-time:
    • Site-wide: 20,549 out of 54,824
    • In genomics: 2,323 out of 3,886
  • Year to date:
    • Site-wide: 43,286 out of 54,824
  • Since beginning of last month:
    • Site-wide: 35,298 out of 54,824

Non-coding Somatic Mutations Converge on the PAX8 Pathway in Epithelial Ovarian Cancer

cancer biology more details view paper
  • Downloaded 324 times
  • Download rankings, all-time:
    • Site-wide: 25,098 out of 54,824
    • In cancer biology: 762 out of 1,769
  • Year to date:
    • Site-wide: 4,971 out of 54,824
  • Since beginning of last month:
    • Site-wide: 9,213 out of 54,824

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