Author: Lin An

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Preprints

An Integrative Framework For Detecting Structural Variations In Cancer Genomes

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  • Site-wide: 59,515 out of 105,768
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  • Site-wide: 74,002 out of 105,768

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

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  • Site-wide: 2,393 out of 105,768
  • In bioinformatics: 409 out of 9,474
• Year to date:
  • Site-wide: 27,647 out of 105,768
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  • Site-wide: 25,059 out of 105,768

HiCPlus: Resolution Enhancement of Hi-C interaction heatmap

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  • Site-wide: 3,971 out of 105,768
  • In bioinformatics: 702 out of 9,474
• Year to date:
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  • Site-wide: 48,086 out of 105,768

Hierarchical Domain Structure Reveals the Divergence of Activity among TADs and Boundaries

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  • In bioinformatics: 2,062 out of 9,474
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An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

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  • In genomics: 2,175 out of 6,382
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  • Site-wide: 34,816 out of 105,769

S3norm: simultaneous normalization of sequencing depth and signal-to-noise ratio in epigenomic data

• Downloaded 822 times
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  • Site-wide: 18,981 out of 105,769
  • In bioinformatics: 2,792 out of 9,474
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  • Site-wide: 22,617 out of 105,769

Snapshot: clustering and visualizing epigenetic history during cell differentiation

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  • In bioinformatics: 3,465 out of 9,474
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  • Site-wide: 30,957 out of 105,769

Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of mouse hematopoietic cells

• Downloaded 265 times
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  • Site-wide: 69,090 out of 105,769
  • In genomics: 5,122 out of 6,382
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  • Site-wide: 87,302 out of 105,769