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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 45,784 bioRxiv papers from 206,165 authors.

Author: Charlotte Soneson

Rankings

  • All-time downloads: 10,418 (rank: 2,325 out of 206,278)
  • Categories:
    • bioinformatics: 10,418 (rank: 178 out of 18,909)

Downloads per author, site-wide

Preprints

ARMOR: an Automated Reproducible MOdular workflow for preprocessing and differential analysis of RNA-seq data

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No bioRxiv download data for this paper yet.

A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes

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No bioRxiv download data for this paper yet.

Bias, Robustness And Scalability In Differential Expression Analysis Of Single-Cell RNA-Seq Data

bioinformatics more details view paper
  • Downloaded 3,822 times
  • Download rankings, all-time:
    • Site-wide: 455 out of 45,813
    • In bioinformatics: 93 out of 4,918
  • Year to date:
    • Site-wide: 5,833 out of 45,813
  • Since beginning of last month:
    • Site-wide: 5,071 out of 45,813

Differential transcript usage from RNA-seq data: isoform pre-filtering improves performance of count-based methods

bioinformatics more details view paper
  • Downloaded 1,815 times
  • Download rankings, all-time:
    • Site-wide: 1,776 out of 45,813
    • In bioinformatics: 378 out of 4,918
  • Year to date:
    • Site-wide: 15,355 out of 45,813
  • Since beginning of last month:
    • Site-wide: 19,798 out of 45,813

zingeR: unlocking RNA-seq tools for zero-inflation and single cell applications

bioinformatics more details view paper
  • Downloaded 1,516 times
  • Download rankings, all-time:
    • Site-wide: 2,393 out of 45,813
    • In bioinformatics: 498 out of 4,918
  • Year to date:
    • Site-wide: 6,398 out of 45,813
  • Since beginning of last month:
    • Site-wide: 5,683 out of 45,813

diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering

bioinformatics more details view paper
  • Downloaded 1,266 times
  • Download rankings, all-time:
    • Site-wide: 3,194 out of 45,813
    • In bioinformatics: 650 out of 4,918
  • Year to date:
    • Site-wide: 1,878 out of 45,813
  • Since beginning of last month:
    • Site-wide: 2,240 out of 45,813

Observation weights to unlock bulk RNA-seq tools for zero inflation and single-cell applications

bioinformatics more details view paper
  • Downloaded 718 times
  • Download rankings, all-time:
    • Site-wide: 7,698 out of 45,813
    • In bioinformatics: 1,412 out of 4,918
  • Year to date:
    • Site-wide: 19,992 out of 45,813
  • Since beginning of last month:
    • Site-wide: 15,174 out of 45,813

A general and powerful stage-wise testing procedure for differential expression and differential transcript usage

bioinformatics more details view paper
  • Downloaded 502 times
  • Download rankings, all-time:
    • Site-wide: 12,370 out of 45,813
    • In bioinformatics: 2,057 out of 4,918
  • Year to date:
    • Site-wide: 25,287 out of 45,813
  • Since beginning of last month:
    • Site-wide: 25,006 out of 45,813

iCOBRA: open, reproducible, standardized and live method benchmarking

bioinformatics more details view paper
  • Downloaded 438 times
  • Download rankings, all-time:
    • Site-wide: 14,549 out of 45,813
    • In bioinformatics: 2,306 out of 4,918
  • Year to date:
    • Site-wide: 35,050 out of 45,813
  • Since beginning of last month:
    • Site-wide: 27,753 out of 45,813

A junction coverage compatibility score to quantify the reliability of transcript abundance estimates and annotation catalogs

bioinformatics more details view paper
  • Downloaded 341 times
  • Download rankings, all-time:
    • Site-wide: 18,756 out of 45,813
    • In bioinformatics: 2,762 out of 4,918
  • Year to date:
    • Site-wide: 15,305 out of 45,813
  • Since beginning of last month:
    • Site-wide: 19,092 out of 45,813

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