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Author: Michael B Eisen

Rankings

  • All-time downloads: 35,946 (rank: 3,864 )
  • Categories:
    • animal behavior and cognition: 6,548 (rank: 110 (tie) )
    • bioinformatics: 2,960 (rank: 4,203 (tie) )
    • developmental biology: 9,293 (rank: 50 )
    • ecology: 531 (rank: 7,572 (tie) )
    • epidemiology: 672 (rank: 11,095 (tie) )
    • evolutionary biology: 1,940 (rank: 2,620 (tie) )
    • genetics: 1,126 (rank: 13,991 (tie) )
    • genomics: 7,668 (rank: 2,650 )
    • microbiology: 5,208 (rank: 2,255 )

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Preprints

Robust manipulation of the behavior of Drosophila melanogaster by a fungal pathogen in the laboratory

animal behavior and cognition more details view paper
  • Downloaded 6,548 times
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    • Site-wide: 1,272
    • In animal behavior and cognition: 7
  • Year to date:
    • Site-wide: 26,263
  • Since beginning of last month:
    • Site-wide: 26,263

Association Mapping From Sequencing Reads Using K-mers

bioinformatics more details view paper
  • Downloaded 2,960 times
  • Download rankings, all-time:
    • Site-wide: 3,909
    • In bioinformatics: 415
  • Year to date:
    • Site-wide: 67,963
  • Since beginning of last month:
    • Site-wide: 67,963

Entomophthovirus: An insect-derived iflavirus that infects a behavior manipulating fungal pathogen of dipterans

microbiology more details view paper
  • Downloaded 2,620 times
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    • Site-wide: 4,691
    • In microbiology: 281
  • Year to date:
    • Site-wide: 26,061
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    • Site-wide: 26,061

The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion

genomics more details view paper
  • Downloaded 2,427 times
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    • Site-wide: 5,247
    • In genomics: 622
  • Year to date:
    • Site-wide: 21,771
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    • Site-wide: 21,771

Kinetic sculpting of the seven stripes of the Drosophila even-skipped gene

developmental biology more details view paper
  • Downloaded 2,101 times
  • Download rankings, all-time:
    • Site-wide: 6,445
    • In developmental biology: 76
  • Year to date:
    • Site-wide: 35,397
  • Since beginning of last month:
    • Site-wide: 35,397

The ancestral animal genetic toolkit revealed by diverse choanoflagellate transcriptomes

evolutionary biology more details view paper
  • Downloaded 1,940 times
  • Download rankings, all-time:
    • Site-wide: 7,237
    • In evolutionary biology: 212
  • Year to date:
    • Site-wide: 21,829
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    • Site-wide: 21,829

Chronic ethanol ingestion impairs Drosophila melanogaster health in a microbiome-dependent manner

microbiology more details view paper
  • Downloaded 1,277 times
  • Download rankings, all-time:
    • Site-wide: 13,562
    • In microbiology: 767
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: None

Dynamic multifactor hubs interact transiently with sites of active transcription in Drosophila embryos

developmental biology more details view paper
  • Downloaded 1,258 times
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    • Site-wide: 13,872
    • In developmental biology: 224
  • Year to date:
    • Site-wide: 100,783
  • Since beginning of last month:
    • Site-wide: 100,783

Validation of methods for Low-volume RNA-seq

genomics more details view paper
  • Downloaded 1,234 times
  • Download rankings, all-time:
    • Site-wide: 14,306
    • In genomics: 1,518
  • Year to date:
    • Site-wide: 92,972
  • Since beginning of last month:
    • Site-wide: 92,972

Dense Bicoid Hubs Accentuate Binding along the Morphogen Gradient

developmental biology more details view paper
  • Downloaded 1,178 times
  • Download rankings, all-time:
    • Site-wide: 15,338
    • In developmental biology: 252
  • Year to date:
    • Site-wide: 77,953
  • Since beginning of last month:
    • Site-wide: 77,953

A chromatin extension model for insulator function based on comparison of high-resolution chromatin conformation capture and polytene banding maps

genomics more details view paper
  • Downloaded 968 times
  • Download rankings, all-time:
    • Site-wide: 20,502
    • In genomics: 2,065
  • Year to date:
    • Site-wide: 119,601
  • Since beginning of last month:
    • Site-wide: 119,601

Convergence of topological domain boundaries, insulators, and polytene interbands revealed by high-resolution mapping of chromatin contacts in the early Drosophila melanogaster embryo

genomics more details view paper
  • Downloaded 967 times
  • Download rankings, all-time:
    • Site-wide: 20,549
    • In genomics: 2,068
  • Year to date:
    • Site-wide: 73,656
  • Since beginning of last month:
    • Site-wide: 73,656

Establishment of regions of genomic activity during the Drosophila maternal to zygotic transition

developmental biology more details view paper
  • Downloaded 941 times
  • Download rankings, all-time:
    • Site-wide: 21,348
    • In developmental biology: 403
  • Year to date:
    • Site-wide: 95,411
  • Since beginning of last month:
    • Site-wide: 95,411

Spatially uniform establishment of chromatin accessibility in the early Drosophila embryo

developmental biology more details view paper
  • Downloaded 938 times
  • Download rankings, all-time:
    • Site-wide: 21,457
    • In developmental biology: 405
  • Year to date:
    • Site-wide: 67,994
  • Since beginning of last month:
    • Site-wide: 67,994

Drosophila embryogenesis scales uniformly across temperature and developmentally diverse species

developmental biology more details view paper
  • Downloaded 893 times
  • Download rankings, all-time:
    • Site-wide: 23,068
    • In developmental biology: 451
  • Year to date:
    • Site-wide: 61,479
  • Since beginning of last month:
    • Site-wide: 61,479

Stable host gene expression in the gut of adult Drosophila melanogaster with different bacterial mono-associations

microbiology more details view paper
  • Downloaded 805 times
  • Download rankings, all-time:
    • Site-wide: 26,661
    • In microbiology: 1,556
  • Year to date:
    • Site-wide: 110,521
  • Since beginning of last month:
    • Site-wide: 110,521

Non-respiratory functions of Saccharomyces cerevisiae mitochondria are required for optimal attractiveness to Drosophila melanogaster

genetics more details view paper
  • Downloaded 761 times
  • Download rankings, all-time:
    • Site-wide: 28,827
    • In genetics: 1,438
  • Year to date:
    • Site-wide: 67,258
  • Since beginning of last month:
    • Site-wide: 67,258

Characterization of the transcriptome, nucleotide sequence polymorphism, and natural selection in the desert adapted mouse Peromyscus eremicus

genomics more details view paper
  • Downloaded 741 times
  • Download rankings, all-time:
    • Site-wide: 29,902
    • In genomics: 2,734
  • Year to date:
    • Site-wide: 51,681
  • Since beginning of last month:
    • Site-wide: 51,681

Impact of essential workers in the context of social distancing for epidemic control

epidemiology more details view paper
  • Downloaded 672 times
  • Download rankings, all-time:
    • Site-wide: 34,246
    • In epidemiology: 1,662
  • Year to date:
    • Site-wide: 40,444
  • Since beginning of last month:
    • Site-wide: 40,444

Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster

genomics more details view paper
  • Downloaded 667 times
  • Download rankings, all-time:
    • Site-wide: 34,523
    • In genomics: 3,037
  • Year to date:
    • Site-wide: 92,345
  • Since beginning of last month:
    • Site-wide: 92,345

Zelda potentiates transcription factor binding to zygotic enhancers by increasing local chromatin accessibility during early Drosophila melanogaster embryogenesis.

developmental biology more details view paper
  • Downloaded 593 times
  • Download rankings, all-time:
    • Site-wide: 40,193
    • In developmental biology: 926
  • Year to date:
    • Site-wide: 111,038
  • Since beginning of last month:
    • Site-wide: 111,038

Mutation of sequences flanking and separating transcription factor binding sites in a Drosophila enhancer significantly alter its output

developmental biology more details view paper
  • Downloaded 535 times
  • Download rankings, all-time:
    • Site-wide: 45,700
    • In developmental biology: 1,080
  • Year to date:
    • Site-wide: 55,424
  • Since beginning of last month:
    • Site-wide: 55,424

The ecology of the Drosophila-yeast mutualism in wineries

ecology more details view paper
  • Downloaded 531 times
  • Download rankings, all-time:
    • Site-wide: 46,120
    • In ecology: 1,185
  • Year to date:
    • Site-wide: 95,770
  • Since beginning of last month:
    • Site-wide: 95,770

Antimicrobial, Antioxidant and Anti-Inflammatory Activities of Proteins of Phaseoulus lunatus (Fabaceae) Baby Lima Beans Produced in Ecuador

microbiology more details view paper
  • Downloaded 506 times
  • Download rankings, all-time:
    • Site-wide: 48,760
    • In microbiology: 3,084
  • Year to date:
    • Site-wide: 92,580
  • Since beginning of last month:
    • Site-wide: 92,580

Oxygen changes drive non-uniform scaling in Drosophila melanogaster embryogenesis

developmental biology more details view paper
  • Downloaded 457 times
  • Download rankings, all-time:
    • Site-wide: 54,759
    • In developmental biology: 1,357
  • Year to date:
    • Site-wide: 85,915
  • Since beginning of last month:
    • Site-wide: 85,915

Convergent evolution of gene expression in two high-toothed stickleback populations

genomics more details view paper
  • Downloaded 436 times
  • Download rankings, all-time:
    • Site-wide: 57,593
    • In genomics: 4,341
  • Year to date:
    • Site-wide: 112,222
  • Since beginning of last month:
    • Site-wide: 112,222

Effects of the maternal factor Zelda on zygotic enhancer activity in the Drosophila embryo

developmental biology more details view paper
  • Downloaded 399 times
  • Download rankings, all-time:
    • Site-wide: 62,909
    • In developmental biology: 1,622
  • Year to date:
    • Site-wide: 95,351
  • Since beginning of last month:
    • Site-wide: 95,351

Or22 allelic variation alone does not explain differences in discrimination of yeast-produced volatiles by D. melanogaster

genetics more details view paper
  • Downloaded 365 times
  • Download rankings, all-time:
    • Site-wide: 68,337
    • In genetics: 3,197
  • Year to date:
    • Site-wide: 100,677
  • Since beginning of last month:
    • Site-wide: 100,677

Whole genome sequences of 23 species from the Drosophila montium species group (Diptera: Drosophilidae): A resource for testing evolutionary hypotheses

genomics more details view paper
  • Downloaded 228 times
  • Download rankings, all-time:
    • Site-wide: 95,470
    • In genomics: 5,812
  • Year to date:
    • Site-wide: 88,460
  • Since beginning of last month:
    • Site-wide: 88,460

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