Author: Clifford A Meyer

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Preprints

MIRA: Joint regulatory modeling of multimodal expression and chromatin accessibility in single cells

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  • In bioinformatics: 1,247
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In Vivo CRISPR Screens Identify E3 Ligase Cop1 as a Modulator of Macrophage Infiltration and Cancer Immunotherapy Target

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  • Site-wide: 9,778
  • In cancer biology: 177
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Determinants of transcription factor regulatory range

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  • Site-wide: 13,487
  • In genomics: 1,203
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Integrative analysis and refined design of CRISPR knockout screens

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  • In bioinformatics: 2,737
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  • Site-wide: 114,435
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BCOR and BCORL1 mutations disrupt PRC1.1 repressive function in leukemia by unlinking the RING-PCGF1 enzymatic core from target genes

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CHIPS: A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data

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  • In bioinformatics: 6,583
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Inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data

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  • Site-wide: 65,640
  • In bioinformatics: 6,030
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Accurate estimation of intrinsic biases for improved analysis of bulk and single-cell chromatin accessibility sequencing data using SELMA

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  • In bioinformatics: 9,221
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