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Author: Avanti Shrikumar

Rankings

  • All-time downloads: 71,545 (rank: 516 out of 380,920)
  • Categories:
    • bioinformatics: 64,027 (rank: 13 out of 32,626)
    • genomics: 7,518 (rank: 2,123 out of 40,647)

Downloads per author, site-wide

Preprints

Opportunities And Obstacles For Deep Learning In Biology And Medicine

bioinformatics more details view paper
  • Downloaded 53,113 times
  • Download rankings, all-time:
    • Site-wide: 20 out of 88,847
    • In bioinformatics: 3 out of 8,398
  • Year to date:
    • Site-wide: 673 out of 88,847
  • Since beginning of last month:
    • Site-wide: 976 out of 88,847

Deep learning at base-resolution reveals cis-regulatory motif syntax

genomics more details view paper
  • Downloaded 5,706 times
  • Download rankings, all-time:
    • Site-wide: 585 out of 88,847
    • In genomics: 119 out of 5,669
  • Year to date:
    • Site-wide: 334 out of 88,847
  • Since beginning of last month:
    • Site-wide: 647 out of 88,847

Kipoi: accelerating the community exchange and reuse of predictive models for genomics

bioinformatics more details view paper
  • Downloaded 3,445 times
  • Download rankings, all-time:
    • Site-wide: 1,435 out of 88,847
    • In bioinformatics: 249 out of 8,398
  • Year to date:
    • Site-wide: 3,677 out of 88,847
  • Since beginning of last month:
    • Site-wide: 6,314 out of 88,847

Reverse-complement parameter sharing improves deep learning models for genomics

bioinformatics more details view paper
  • Downloaded 3,316 times
  • Download rankings, all-time:
    • Site-wide: 1,530 out of 88,847
    • In bioinformatics: 270 out of 8,398
  • Year to date:
    • Site-wide: 7,995 out of 88,847
  • Since beginning of last month:
    • Site-wide: 16,329 out of 88,847

Separable Fully Connected Layers Improve Deep Learning Models For Genomics

bioinformatics more details view paper
  • Downloaded 2,996 times
  • Download rankings, all-time:
    • Site-wide: 1,850 out of 88,847
    • In bioinformatics: 334 out of 8,398
  • Year to date:
    • Site-wide: 19,594 out of 88,847
  • Since beginning of last month:
    • Site-wide: 19,691 out of 88,847

Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays

genomics more details view paper
  • Downloaded 1,812 times
  • Download rankings, all-time:
    • Site-wide: 4,261 out of 88,847
    • In genomics: 731 out of 5,669
  • Year to date:
    • Site-wide: 29,359 out of 88,847
  • Since beginning of last month:
    • Site-wide: 24,504 out of 88,847

Gkmexplain: Fast and Accurate Interpretation of Nonlinear Gapped k-mer Support Vector Machines Using Integrated Gradients

bioinformatics more details view paper
  • Downloaded 763 times
  • Download rankings, all-time:
    • Site-wide: 17,343 out of 88,847
    • In bioinformatics: 2,622 out of 8,398
  • Year to date:
    • Site-wide: 44,599 out of 88,847
  • Since beginning of last month:
    • Site-wide: 26,767 out of 88,847

Fourier-transform-based attribution priors improve the interpretability and stability of deep learning models for genomics

bioinformatics more details view paper
  • Downloaded 394 times
  • Download rankings, all-time:
    • Site-wide: 40,908 out of 88,847
    • In bioinformatics: 4,932 out of 8,398
  • Year to date:
    • Site-wide: 5,592 out of 88,847
  • Since beginning of last month:
    • Site-wide: 523 out of 88,847

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