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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 65,403 bioRxiv papers from 289,703 authors.

Author: Benjamin Langmead

Rankings

  • All-time downloads: 17,664 (rank: 1,622 out of 289,703)
  • Categories:
    • bioinformatics: 10,626 (rank: 283 out of 25,225)
    • genomics: 7,038 (rank: 1,673 out of 32,925)

Downloads per author, site-wide

Preprints

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,091 times
  • Download rankings, all-time:
    • Site-wide: 635 out of 65,403
    • In genomics: 165 out of 4,463
  • Year to date:
    • Site-wide: 9,970 out of 65,403
  • Since beginning of last month:
    • Site-wide: 12,990 out of 65,403

HISAT: Hierarchical Indexing for Spliced Alignment of Transcripts

bioinformatics more details view paper
  • Downloaded 2,944 times
  • Download rankings, all-time:
    • Site-wide: 1,190 out of 65,403
    • In bioinformatics: 239 out of 6,484
  • Year to date:
    • Site-wide: 24,882 out of 65,403
  • Since beginning of last month:
    • Site-wide: 46,459 out of 65,403

Dashing: Fast and Accurate Genomic Distances with HyperLogLog

bioinformatics more details view paper
  • Downloaded 2,090 times
  • Download rankings, all-time:
    • Site-wide: 2,179 out of 65,403
    • In bioinformatics: 447 out of 6,484
  • Year to date:
    • Site-wide: 828 out of 65,403
  • Since beginning of last month:
    • Site-wide: 712 out of 65,403

Scaling read aligners to hundreds of threads on general-purpose processors

bioinformatics more details view paper
  • Downloaded 1,935 times
  • Download rankings, all-time:
    • Site-wide: 2,493 out of 65,403
    • In bioinformatics: 505 out of 6,484
  • Year to date:
    • Site-wide: 10,778 out of 65,403
  • Since beginning of last month:
    • Site-wide: 15,625 out of 65,403

Analyzing whole genome bisulfite sequencing data from highly divergent genotypes

genomics more details view paper
  • Downloaded 1,490 times
  • Download rankings, all-time:
    • Site-wide: 3,869 out of 65,403
    • In genomics: 715 out of 4,463
  • Year to date:
    • Site-wide: 10,668 out of 65,403
  • Since beginning of last month:
    • Site-wide: 16,624 out of 65,403

Improved metagenomic analysis with Kraken 2

bioinformatics more details view paper
  • Downloaded 1,446 times
  • Download rankings, all-time:
    • Site-wide: 4,068 out of 65,403
    • In bioinformatics: 806 out of 6,484
  • Year to date:
    • Site-wide: 895 out of 65,403
  • Since beginning of last month:
    • Site-wide: 193 out of 65,403

Samovar: Single-sample mosaic SNV calling with linked reads

genomics more details view paper
  • Downloaded 842 times
  • Download rankings, all-time:
    • Site-wide: 9,796 out of 65,403
    • In genomics: 1,458 out of 4,463
  • Year to date:
    • Site-wide: 2,337 out of 65,403
  • Since beginning of last month:
    • Site-wide: 12,176 out of 65,403

Snaptron: querying and visualizing splicing across tens of thousands of RNA-seq samples

bioinformatics more details view paper
  • Downloaded 791 times
  • Download rankings, all-time:
    • Site-wide: 10,766 out of 65,403
    • In bioinformatics: 1,841 out of 6,484
  • Year to date:
    • Site-wide: 51,715 out of 65,403
  • Since beginning of last month:
    • Site-wide: 32,303 out of 65,403

A tandem simulation framework for predicting mapping quality

bioinformatics more details view paper
  • Downloaded 712 times
  • Download rankings, all-time:
    • Site-wide: 12,602 out of 65,403
    • In bioinformatics: 2,072 out of 6,484
  • Year to date:
    • Site-wide: 31,366 out of 65,403
  • Since beginning of last month:
    • Site-wide: 38,632 out of 65,403

Boiler: Lossy compression of RNA-seq alignments using coverage vectors

bioinformatics more details view paper
  • Downloaded 708 times
  • Download rankings, all-time:
    • Site-wide: 12,718 out of 65,403
    • In bioinformatics: 2,085 out of 6,484
  • Year to date:
    • Site-wide: 57,861 out of 65,403
  • Since beginning of last month:
    • Site-wide: 53,657 out of 65,403

Recounting the FANTOM Cage Associated Transcriptome

genomics more details view paper
  • Downloaded 615 times
  • Download rankings, all-time:
    • Site-wide: 15,456 out of 65,403
    • In genomics: 1,984 out of 4,463
  • Year to date:
    • Site-wide: 4,078 out of 65,403
  • Since beginning of last month:
    • Site-wide: 12,310 out of 65,403

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