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Author: Abhinav Nellore

Rankings

  • All-time downloads: 45,419 (rank: 4,430 )
  • Categories:
    • bioinformatics: 12,389 (rank: 723 )
    • cancer biology: 2,422 (rank: 3,082 (tie) )
    • genomics: 13,399 (rank: 1,484 )
    • immunology: 455 (rank: 25,811 (tie) )
    • infectious diseases: 15,893 (rank: 4,172 (tie) )
    • neuroscience: 861 (rank: 35,037 (tie) )

Downloads per author, site-wide

Preprints

Human leukocyte antigen susceptibility map for SARS-CoV-2

infectious diseases more details view paper
  • Downloaded 15,893 times
  • Download rankings, all-time:
    • Site-wide: 590
    • In infectious diseases: 220
  • Year to date:
    • Site-wide: 5,603
  • Since beginning of last month:
    • Site-wide: 12,467

recount: A large-scale resource of analysis-ready RNA-seq expression data

genomics more details view paper
  • Downloaded 4,524 times
  • Download rankings, all-time:
    • Site-wide: 3,078
    • In genomics: 297
  • Year to date:
    • Site-wide: 22,401
  • Since beginning of last month:
    • Site-wide: 48,000

Rail-RNA: Scalable analysis of RNA-seq splicing and coverage

bioinformatics more details view paper
  • Downloaded 3,508 times
  • Download rankings, all-time:
    • Site-wide: 4,373
    • In bioinformatics: 410
  • Year to date:
    • Site-wide: 118,807
  • Since beginning of last month:
    • Site-wide: 136,179

Human splicing diversity across the Sequence Read Archive

genomics more details view paper
  • Downloaded 2,589 times
  • Download rankings, all-time:
    • Site-wide: 6,818
    • In genomics: 692
  • Year to date:
    • Site-wide: 76,584
  • Since beginning of last month:
    • Site-wide: 48,027

Building Genomic Analysis Pipelines in a Hackathon Setting with Bioinformatician Teams: DNA-seq, Epigenomics, Metagenomics and RNA-seq

genomics more details view paper
  • Downloaded 2,544 times
  • Download rankings, all-time:
    • Site-wide: 7,006
    • In genomics: 718
  • Year to date:
    • Site-wide: 43,980
  • Since beginning of last month:
    • Site-wide: 41,506

Flexible expressed region analysis for RNA-seq with derfinder

bioinformatics more details view paper
  • Downloaded 2,473 times
  • Download rankings, all-time:
    • Site-wide: 7,293
    • In bioinformatics: 772
  • Year to date:
    • Site-wide: 103,588
  • Since beginning of last month:
    • Site-wide: 122,448

RNA-seq transcript quantification from reduced-representation data in recount2

genomics more details view paper
  • Downloaded 2,000 times
  • Download rankings, all-time:
    • Site-wide: 9,988
    • In genomics: 982
  • Year to date:
    • Site-wide: 68,855
  • Since beginning of last month:
    • Site-wide: 87,881

A framework for RNA quality correction in differential expression analysis

bioinformatics more details view paper
  • Downloaded 1,778 times
  • Download rankings, all-time:
    • Site-wide: 11,916
    • In bioinformatics: 1,323
  • Year to date:
    • Site-wide: 126,722
  • Since beginning of last month:
    • Site-wide: 140,194

recount3: summaries and queries for large-scale RNA-seq expression and splicing

genomics more details view paper
  • Downloaded 1,742 times
  • Download rankings, all-time:
    • Site-wide: 12,250
    • In genomics: 1,220
  • Year to date:
    • Site-wide: 2,382
  • Since beginning of last month:
    • Site-wide: 1,396

neoepiscope improves neoepitope prediction with multi-variant phasing

bioinformatics more details view paper
  • Downloaded 1,555 times
  • Download rankings, all-time:
    • Site-wide: 14,558
    • In bioinformatics: 1,630
  • Year to date:
    • Site-wide: 49,254
  • Since beginning of last month:
    • Site-wide: 45,910

Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce

bioinformatics more details view paper
  • Downloaded 1,153 times
  • Download rankings, all-time:
    • Site-wide: 23,012
    • In bioinformatics: 2,585
  • Year to date:
    • Site-wide: 118,329
  • Since beginning of last month:
    • Site-wide: 156,371

Population-level distribution and putative immunogenicity of cancer neoepitopes

cancer biology more details view paper
  • Downloaded 1,107 times
  • Download rankings, all-time:
    • Site-wide: 24,498
    • In cancer biology: 610
  • Year to date:
    • Site-wide: 144,251
  • Since beginning of last month:
    • Site-wide: 145,370

Snaptron: querying and visualizing splicing across tens of thousands of RNA-seq samples

bioinformatics more details view paper
  • Downloaded 988 times
  • Download rankings, all-time:
    • Site-wide: 29,070
    • In bioinformatics: 3,215
  • Year to date:
    • Site-wide: 115,715
  • Since beginning of last month:
    • Site-wide: 155,050

ASCOT identifies key regulators of neuronal subtype-specific splicing

neuroscience more details view paper
  • Downloaded 861 times
  • Download rankings, all-time:
    • Site-wide: 35,521
    • In neuroscience: 4,677
  • Year to date:
    • Site-wide: 132,271
  • Since beginning of last month:
    • Site-wide: 142,833

Burden of tumor mutations, neoepitopes, and other variants are dubious predictors of cancer immunotherapy response and overall survival

cancer biology more details view paper
  • Downloaded 777 times
  • Download rankings, all-time:
    • Site-wide: 41,149
    • In cancer biology: 1,124
  • Year to date:
    • Site-wide: 106,013
  • Since beginning of last month:
    • Site-wide: 96,989

Human methylome variation across Infinium 450K data on the Gene Expression Omnibus

bioinformatics more details view paper
  • Downloaded 763 times
  • Download rankings, all-time:
    • Site-wide: 42,326
    • In bioinformatics: 4,439
  • Year to date:
    • Site-wide: 25,252
  • Since beginning of last month:
    • Site-wide: 16,022

Putatively cancer-specific alternative splicing is shared across patients and present in developmental and other non-cancer cells

cancer biology more details view paper
  • Downloaded 538 times
  • Download rankings, all-time:
    • Site-wide: 67,133
    • In cancer biology: 1,938
  • Year to date:
    • Site-wide: 111,527
  • Since beginning of last month:
    • Site-wide: 69,376

Alternative Splicing of MR1 regulates antigen presentation to MAIT cells

immunology more details view paper
  • Downloaded 455 times
  • Download rankings, all-time:
    • Site-wide: 81,180
    • In immunology: 2,442
  • Year to date:
    • Site-wide: 159,172
  • Since beginning of last month:
    • Site-wide: 145,198

Pepsickle rapidly and accurately predicts proteasomal cleavage sites for improved neoantigen identification

bioinformatics more details view paper
  • Downloaded 171 times
  • Download rankings, all-time:
    • Site-wide: 149,028
    • In bioinformatics: 11,391
  • Year to date:
    • Site-wide: 69,649
  • Since beginning of last month:
    • Site-wide: 36,082

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