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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 48,029 bioRxiv papers from 215,369 authors.

Author: Fritz J. Sedlazeck

Rankings

  • All-time downloads: 32,457 (rank: 380 out of 215,369)
  • Categories:
    • bioinformatics: 21,675 (rank: 65 out of 19,497)
    • evolutionary biology: 491 (rank: 5,445 (tie) out of 12,558)
    • genetics: 1,688 (rank: 4,776 (tie) out of 21,890)
    • genomics: 8,603 (rank: 923 out of 25,614)

Downloads per author, site-wide

Preprints

Targeted Nanopore Sequencing with Cas9 for studies of methylation, structural variants and mutations

genomics more details view paper

No bioRxiv download data for this paper yet.

Phased Diploid Genome Assembly with Single Molecule Real-Time Sequencing

bioinformatics more details view paper
  • Downloaded 6,210 times
  • Download rankings, all-time:
    • Site-wide: 188 out of 48,029
    • In bioinformatics: 34 out of 5,096
  • Year to date:
    • Site-wide: 6,296 out of 48,029
  • Since beginning of last month:
    • Site-wide: 4,970 out of 48,029

Highly-accurate long-read sequencing improves variant detection and assembly of a human genome

genomics more details view paper
  • Downloaded 5,507 times
  • Download rankings, all-time:
    • Site-wide: 237 out of 48,029
    • In genomics: 67 out of 3,522
  • Year to date:
    • Site-wide: 12 out of 48,029
  • Since beginning of last month:
    • Site-wide: 40 out of 48,029

Accurate detection of complex structural variations using single molecule sequencing

bioinformatics more details view paper
  • Downloaded 4,723 times
  • Download rankings, all-time:
    • Site-wide: 314 out of 48,029
    • In bioinformatics: 63 out of 5,096
  • Year to date:
    • Site-wide: 1,655 out of 48,029
  • Since beginning of last month:
    • Site-wide: 1,858 out of 48,029

Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing

bioinformatics more details view paper
  • Downloaded 2,538 times
  • Download rankings, all-time:
    • Site-wide: 1,051 out of 48,029
    • In bioinformatics: 226 out of 5,096
  • Year to date:
    • Site-wide: 1,005 out of 48,029
  • Since beginning of last month:
    • Site-wide: 1,345 out of 48,029

Detection of GBA missense mutations and other variants using the Oxford Nanopore MinION

genetics more details view paper
  • Downloaded 1,688 times
  • Download rankings, all-time:
    • Site-wide: 2,145 out of 48,029
    • In genetics: 207 out of 2,854
  • Year to date:
    • Site-wide: 5,564 out of 48,029
  • Since beginning of last month:
    • Site-wide: 5,242 out of 48,029

Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing

genomics more details view paper
  • Downloaded 1,500 times
  • Download rankings, all-time:
    • Site-wide: 2,597 out of 48,029
    • In genomics: 537 out of 3,522
  • Year to date:
    • Site-wide: 210 out of 48,029
  • Since beginning of last month:
    • Site-wide: 614 out of 48,029

GenomeScope: Fast reference-free genome profiling from short reads

bioinformatics more details view paper
  • Downloaded 1,440 times
  • Download rankings, all-time:
    • Site-wide: 2,770 out of 48,029
    • In bioinformatics: 566 out of 5,096
  • Year to date:
    • Site-wide: 28,785 out of 48,029
  • Since beginning of last month:
    • Site-wide: 27,975 out of 48,029

xAtlas: Scalable small variant calling across heterogeneous next-generation sequencing experiments

bioinformatics more details view paper
  • Downloaded 1,348 times
  • Download rankings, all-time:
    • Site-wide: 3,087 out of 48,029
    • In bioinformatics: 627 out of 5,096
  • Year to date:
    • Site-wide: 6,056 out of 48,029
  • Since beginning of last month:
    • Site-wide: 7,664 out of 48,029

Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line

genomics more details view paper
  • Downloaded 1,328 times
  • Download rankings, all-time:
    • Site-wide: 3,170 out of 48,029
    • In genomics: 626 out of 3,522
  • Year to date:
    • Site-wide: 21,656 out of 48,029
  • Since beginning of last month:
    • Site-wide: 17,154 out of 48,029

Parliament2: Fast Structural Variant Calling Using Optimized Combinations of Callers

bioinformatics more details view paper
  • Downloaded 1,262 times
  • Download rankings, all-time:
    • Site-wide: 3,460 out of 48,029
    • In bioinformatics: 700 out of 5,096
  • Year to date:
    • Site-wide: 888 out of 48,029
  • Since beginning of last month:
    • Site-wide: 1,969 out of 48,029

LRSim: a Linked Reads Simulator generating insights for better genome partitioning

bioinformatics more details view paper
  • Downloaded 1,107 times
  • Download rankings, all-time:
    • Site-wide: 4,248 out of 48,029
    • In bioinformatics: 864 out of 5,096
  • Year to date:
    • Site-wide: 37,631 out of 48,029
  • Since beginning of last month:
    • Site-wide: 38,616 out of 48,029

Fast and accurate reference-guided scaffolding of draft genomes

bioinformatics more details view paper
  • Downloaded 1,050 times
  • Download rankings, all-time:
    • Site-wide: 4,615 out of 48,029
    • In bioinformatics: 927 out of 5,096
  • Year to date:
    • Site-wide: 209 out of 48,029
  • Since beginning of last month:
    • Site-wide: 506 out of 48,029

SplitThreader: Exploration and analysis of rearrangements in cancer genomes

bioinformatics more details view paper
  • Downloaded 809 times
  • Download rankings, all-time:
    • Site-wide: 6,900 out of 48,029
    • In bioinformatics: 1,277 out of 5,096
  • Year to date:
    • Site-wide: 21,166 out of 48,029
  • Since beginning of last month:
    • Site-wide: 18,591 out of 48,029

Teaser: Individualized benchmarking and optimization of read mapping results for NGS data

bioinformatics more details view paper
  • Downloaded 496 times
  • Download rankings, all-time:
    • Site-wide: 13,559 out of 48,029
    • In bioinformatics: 2,202 out of 5,096
  • Year to date:
    • Site-wide: 38,375 out of 48,029
  • Since beginning of last month:
    • Site-wide: 36,422 out of 48,029

Ancestral admixture is the main determinant of global biodiversity in fission yeast

evolutionary biology more details view paper
  • Downloaded 491 times
  • Download rankings, all-time:
    • Site-wide: 13,702 out of 48,029
    • In evolutionary biology: 1,093 out of 3,465
  • Year to date:
    • Site-wide: 5,246 out of 48,029
  • Since beginning of last month:
    • Site-wide: 6,321 out of 48,029

SVCollector: Optimized sample selection for validating and long-read resequencing of structural variants

bioinformatics more details view paper
  • Downloaded 439 times
  • Download rankings, all-time:
    • Site-wide: 15,621 out of 48,029
    • In bioinformatics: 2,436 out of 5,096
  • Year to date:
    • Site-wide: 3,996 out of 48,029
  • Since beginning of last month:
    • Site-wide: 7,442 out of 48,029

Atlas-CNV: a validated approach to call Single-Exon CNVs in the eMERGESeq gene panel

genomics more details view paper
  • Downloaded 268 times
  • Download rankings, all-time:
    • Site-wide: 24,913 out of 48,029
    • In genomics: 2,565 out of 3,522
  • Year to date:
    • Site-wide: 10,813 out of 48,029
  • Since beginning of last month:
    • Site-wide: 13,520 out of 48,029

Evaluation of computational genotyping of Structural Variations for clinical diagnoses.

bioinformatics more details view paper
  • Downloaded 253 times
  • Download rankings, all-time:
    • Site-wide: 26,048 out of 48,029
    • In bioinformatics: 3,495 out of 5,096
  • Year to date:
    • Site-wide: 2,860 out of 48,029
  • Since beginning of last month:
    • Site-wide: 4,044 out of 48,029

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