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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 52,319 bioRxiv papers from 242,658 authors.

Author: Serghei Mangul

Rankings

  • All-time downloads: 24,874 (rank: 659 out of 242,658)
  • Categories:
    • bioinformatics: 9,916 (rank: 231 out of 21,501)
    • genetics: 4,597 (rank: 2,415 (tie) out of 23,639)
    • genomics: 2,472 (rank: 4,896 (tie) out of 28,115)
    • immunology: 3,039 (rank: 157 (tie) out of 9,642)
    • microbiology: 4,129 (rank: 130 out of 23,535)
    • scientific communication and education: 721 (rank: 601 (tie) out of 1,809)

Downloads per author, site-wide

Preprints

A comprehensive map of genetic variation in the world's largest ethnic group - Han Chinese

genetics more details view paper
  • Downloaded 4,597 times
  • Download rankings, all-time:
    • Site-wide: 387 out of 52,319
    • In genetics: 43 out of 3,050
  • Year to date:
    • Site-wide: 1,488 out of 52,319
  • Since beginning of last month:
    • Site-wide: 1,815 out of 52,319

Challenges and recommendations to improve the installability and archival stability of omics computational tools

bioinformatics more details view paper
  • Downloaded 3,996 times
  • Download rankings, all-time:
    • Site-wide: 511 out of 52,319
    • In bioinformatics: 102 out of 5,482
  • Year to date:
    • Site-wide: 438 out of 52,319
  • Since beginning of last month:
    • Site-wide: 583 out of 52,319

Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia

microbiology more details view paper
  • Downloaded 3,287 times
  • Download rankings, all-time:
    • Site-wide: 749 out of 52,319
    • In microbiology: 14 out of 4,092
  • Year to date:
    • Site-wide: 4,386 out of 52,319
  • Since beginning of last month:
    • Site-wide: 2,576 out of 52,319

Profiling immunoglobulin repertoires across multiple human tissues by RNA Sequencing

immunology more details view paper
  • Downloaded 3,039 times
  • Download rankings, all-time:
    • Site-wide: 865 out of 52,319
    • In immunology: 9 out of 1,205
  • Year to date:
    • Site-wide: 1,708 out of 52,319
  • Since beginning of last month:
    • Site-wide: 2,740 out of 52,319

Comprehensive analysis of RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues

genomics more details view paper
  • Downloaded 2,472 times
  • Download rankings, all-time:
    • Site-wide: 1,253 out of 52,319
    • In genomics: 300 out of 3,745
  • Year to date:
    • Site-wide: 31,747 out of 52,319
  • Since beginning of last month:
    • Site-wide: 31,304 out of 52,319

UMI-Reducer: Collapsing duplicate sequencing reads via Unique Molecular Identifiers

bioinformatics more details view paper
  • Downloaded 1,968 times
  • Download rankings, all-time:
    • Site-wide: 1,894 out of 52,319
    • In bioinformatics: 402 out of 5,482
  • Year to date:
    • Site-wide: 3,886 out of 52,319
  • Since beginning of last month:
    • Site-wide: 6,797 out of 52,319

MiCoP: Microbial Community Profiling method for detecting viral and fungal organisms in metagenomic samples

bioinformatics more details view paper
  • Downloaded 1,149 times
  • Download rankings, all-time:
    • Site-wide: 4,577 out of 52,319
    • In bioinformatics: 919 out of 5,482
  • Year to date:
    • Site-wide: 8,713 out of 52,319
  • Since beginning of last month:
    • Site-wide: 6,214 out of 52,319

PUMA: A tool for processing 16S rRNA taxonomy data for analysis and visualization

microbiology more details view paper
  • Downloaded 842 times
  • Download rankings, all-time:
    • Site-wide: 7,501 out of 52,319
    • In microbiology: 311 out of 4,092
  • Year to date:
    • Site-wide: 1,655 out of 52,319
  • Since beginning of last month:
    • Site-wide: 1,740 out of 52,319

HapIso : An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads

bioinformatics more details view paper
  • Downloaded 766 times
  • Download rankings, all-time:
    • Site-wide: 8,682 out of 52,319
    • In bioinformatics: 1,546 out of 5,482
  • Year to date:
    • Site-wide: 43,046 out of 52,319
  • Since beginning of last month:
    • Site-wide: 34,216 out of 52,319

Addressing the digital divide in contemporary biology: Lessons from teaching UNIX

scientific communication and education more details view paper
  • Downloaded 721 times
  • Download rankings, all-time:
    • Site-wide: 9,480 out of 52,319
    • In scientific communication and education: 97 out of 347
  • Year to date:
    • Site-wide: 42,679 out of 52,319
  • Since beginning of last month:
    • Site-wide: 42,487 out of 52,319

Long single-molecule reads can resolve the complexity of the Influenza virus composed of rare, closely related mutant variants

bioinformatics more details view paper
  • Downloaded 710 times
  • Download rankings, all-time:
    • Site-wide: 9,673 out of 52,319
    • In bioinformatics: 1,696 out of 5,482
  • Year to date:
    • Site-wide: 43,877 out of 52,319
  • Since beginning of last month:
    • Site-wide: 42,868 out of 52,319

Reference-free comparison of microbial communities via de Bruijn graphs

bioinformatics more details view paper
  • Downloaded 644 times
  • Download rankings, all-time:
    • Site-wide: 11,094 out of 52,319
    • In bioinformatics: 1,891 out of 5,482
  • Year to date:
    • Site-wide: 36,680 out of 52,319
  • Since beginning of last month:
    • Site-wide: 24,046 out of 52,319

Benchmarking of computational error-correction methods for next-generation sequencing via unique molecular identifiers

bioinformatics more details view paper
  • Downloaded 380 times
  • Download rankings, all-time:
    • Site-wide: 20,926 out of 52,319
    • In bioinformatics: 3,018 out of 5,482
  • Year to date:
    • Site-wide: 3,526 out of 52,319
  • Since beginning of last month:
    • Site-wide: 418 out of 52,319

Analysis of multiple fungal sequence repositories highlights shortcomings in microbial databases

bioinformatics more details view paper
  • Downloaded 303 times
  • Download rankings, all-time:
    • Site-wide: 26,004 out of 52,319
    • In bioinformatics: 3,538 out of 5,482
  • Year to date:
    • Site-wide: 7,628 out of 52,319
  • Since beginning of last month:
    • Site-wide: 21,071 out of 52,319

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