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Author: Alexander Dobin

Rankings

  • All-time downloads: 19,472 (rank: 12,975 (tie) )
  • Categories:
    • bioinformatics: 8,241 (rank: 1,465 )
    • genomics: 4,380 (rank: 6,566 (tie) )
    • neuroscience: 6,851 (rank: 3,240 (tie) )

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Preprints

Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

neuroscience more details view paper
  • Downloaded 6,851 times
  • Download rankings, all-time:
    • Site-wide: 1,838
    • In neuroscience: 86
  • Year to date:
    • Site-wide: 6,917
  • Since beginning of last month:
    • Site-wide: 8,118

Comment on “TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions” by Kim et al.

bioinformatics more details view paper
  • Downloaded 2,932 times
  • Download rankings, all-time:
    • Site-wide: 5,975
    • In bioinformatics: 571
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 163,182

Is it time to change the reference genome?

genomics more details view paper
  • Downloaded 2,483 times
  • Download rankings, all-time:
    • Site-wide: 7,586
    • In genomics: 763
  • Year to date:
    • Site-wide: 104,449
  • Since beginning of last month:
    • Site-wide: 124,143

STARsolo: accurate, fast and versatile mapping/quantification of single-cell and single-nucleus RNA-seq data

bioinformatics more details view paper
  • Downloaded 2,446 times
  • Download rankings, all-time:
    • Site-wide: 7,745
    • In bioinformatics: 809
  • Year to date:
    • Site-wide: 2,369
  • Since beginning of last month:
    • Site-wide: 2,924

The fractured landscape of RNA-seq alignment: The default in our STARs

bioinformatics more details view paper
  • Downloaded 1,397 times
  • Download rankings, all-time:
    • Site-wide: 17,952
    • In bioinformatics: 2,002
  • Year to date:
    • Site-wide: 144,187
  • Since beginning of last month:
    • Site-wide: 144,528

A limited set of transcriptional programs define major cell types

genomics more details view paper
  • Downloaded 1,060 times
  • Download rankings, all-time:
    • Site-wide: 27,251
    • In genomics: 2,396
  • Year to date:
    • Site-wide: 120,275
  • Since beginning of last month:
    • Site-wide: 72,733

Virtue as the mean: Pan-human consensus genome significantly improves the accuracy of RNA-seq analyses

bioinformatics more details view paper
  • Downloaded 880 times
  • Download rankings, all-time:
    • Site-wide: 35,877
    • In bioinformatics: 3,830
  • Year to date:
    • Site-wide: 116,787
  • Since beginning of last month:
    • Site-wide: 23,149

Multi-tissue integrative analysis of personal epigenomes

genomics more details view paper
  • Downloaded 837 times
  • Download rankings, all-time:
    • Site-wide: 38,579
    • In genomics: 3,116
  • Year to date:
    • Site-wide: 13,902
  • Since beginning of last month:
    • Site-wide: 13,848

Management, Analyses, and Distribution of the MaizeCODE Data on the Cloud

bioinformatics more details view paper
  • Downloaded 374 times
  • Download rankings, all-time:
    • Site-wide: 101,969
    • In bioinformatics: 8,687
  • Year to date:
    • Site-wide: 147,102
  • Since beginning of last month:
    • Site-wide: 135,476

Targeted in silico characterization of fusion transcripts in tumor and normal tissues via FusionInspector

bioinformatics more details view paper
  • Downloaded 212 times
  • Download rankings, all-time:
    • Site-wide: 144,529
    • In bioinformatics: 11,233
  • Year to date:
    • Site-wide: 22,760
  • Since beginning of last month:
    • Site-wide: 6,975

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