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Author: Joshua M. Stuart

Rankings

  • All-time downloads: 15,309 (rank: 4,597 out of 398,523)
  • Categories:
    • bioinformatics: 3,868 (rank: 2,589 out of 33,944)
    • cancer biology: 9,129 (rank: 162 out of 27,746)
    • developmental biology: 1,323 (rank: 1,719 (tie) out of 15,492)
    • genomics: 252 (rank: 37,063 (tie) out of 42,315)
    • systems biology: 737 (rank: 4,392 (tie) out of 11,648)

Downloads per author, site-wide

Preprints

Pan-cancer analysis of whole genomes

cancer biology more details view paper
  • Downloaded 7,636 times
  • Download rankings, all-time:
    • Site-wide: 393 out of 93,433
    • In cancer biology: 10 out of 3,302
  • Year to date:
    • Site-wide: 1,510 out of 93,433
  • Since beginning of last month:
    • Site-wide: 8,946 out of 93,433

Creating Standards for Evaluating Tumour Subclonal Reconstruction

bioinformatics more details view paper
  • Downloaded 1,865 times
  • Download rankings, all-time:
    • Site-wide: 4,293 out of 93,433
    • In bioinformatics: 784 out of 8,754
  • Year to date:
    • Site-wide: 19,080 out of 93,433
  • Since beginning of last month:
    • Site-wide: 20,647 out of 93,433

Pathway and network analysis of more than 2,500 whole cancer genomes

cancer biology more details view paper
  • Downloaded 1,493 times
  • Download rankings, all-time:
    • Site-wide: 6,227 out of 93,433
    • In cancer biology: 158 out of 3,302
  • Year to date:
    • Site-wide: 18,888 out of 93,433
  • Since beginning of last month:
    • Site-wide: 22,027 out of 93,433

Modeling human TBX5 haploinsufficiency predicts regulatory networks for congenital heart disease

developmental biology more details view paper
  • Downloaded 1,323 times
  • Download rankings, all-time:
    • Site-wide: 7,590 out of 93,433
    • In developmental biology: 146 out of 2,773
  • Year to date:
    • Site-wide: 3,274 out of 93,433
  • Since beginning of last month:
    • Site-wide: 4,114 out of 93,433

Combining accurate tumour genome simulation with crowd-sourcing to benchmark somatic structural variant detection

bioinformatics more details view paper
  • Downloaded 851 times
  • Download rankings, all-time:
    • Site-wide: 15,559 out of 93,433
    • In bioinformatics: 2,393 out of 8,754
  • Year to date:
    • Site-wide: 54,074 out of 93,433
  • Since beginning of last month:
    • Site-wide: 37,394 out of 93,433

Tracing co-regulatory network dynamics in noisy, single-cell transcriptome trajectories

bioinformatics more details view paper
  • Downloaded 836 times
  • Download rankings, all-time:
    • Site-wide: 15,988 out of 93,433
    • In bioinformatics: 2,460 out of 8,754
  • Year to date:
    • Site-wide: 81,793 out of 93,433
  • Since beginning of last month:
    • Site-wide: 85,869 out of 93,433

Biological Process Activity Transformation of Single Cell Gene Expression for Cross-Species Alignment

systems biology more details view paper
  • Downloaded 516 times
  • Download rankings, all-time:
    • Site-wide: 31,621 out of 93,433
    • In systems biology: 894 out of 2,385
  • Year to date:
    • Site-wide: 50,372 out of 93,433
  • Since beginning of last month:
    • Site-wide: 71,148 out of 93,433

Germline Contamination and Leakage in Whole Genome Somatic Single Nucleotide Variant Detection

genomics more details view paper
  • Downloaded 252 times
  • Download rankings, all-time:
    • Site-wide: 63,208 out of 93,433
    • In genomics: 4,798 out of 5,881
  • Year to date:
    • Site-wide: 80,825 out of 93,433
  • Since beginning of last month:
    • Site-wide: 71,584 out of 93,433

Valection: Design Optimization for Validation and Verification Studies

bioinformatics more details view paper
  • Downloaded 250 times
  • Download rankings, all-time:
    • Site-wide: 63,579 out of 93,433
    • In bioinformatics: 6,706 out of 8,754
  • Year to date:
    • Site-wide: 85,041 out of 93,433
  • Since beginning of last month:
    • Site-wide: 66,654 out of 93,433

Using Transcriptional Signatures to Find Cancer Drivers with LURE

systems biology more details view paper
  • Downloaded 221 times
  • Download rankings, all-time:
    • Site-wide: 68,621 out of 93,433
    • In systems biology: 1,949 out of 2,385
  • Year to date:
    • Site-wide: 70,183 out of 93,433
  • Since beginning of last month:
    • Site-wide: 85,688 out of 93,433

Highly Accurate Cancer Phenotype Prediction with AKLIMATE, a Stacked Kernel Learner Integrating Multimodal Genomic Data and Pathway Knowledge

bioinformatics more details view paper
  • Downloaded 66 times
  • Download rankings, all-time:
    • Site-wide: 89,438 out of 93,433
    • In bioinformatics: 8,459 out of 8,754
  • Year to date:
    • Site-wide: 68,660 out of 93,433
  • Since beginning of last month:
    • Site-wide: 6,898 out of 93,433

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