Rxivist logo

Author: William Greenleaf

Rankings

  • All-time downloads: 69,006 (rank: 473 out of 359,889)
  • Categories:
    • biochemistry: 2,606 (rank: 481 out of 15,863)
    • bioinformatics: 3,921 (rank: 2,301 (tie) out of 31,161)
    • biophysics: 2,693 (rank: 555 out of 14,618)
    • developmental biology: 2,680 (rank: 422 (tie) out of 13,998)
    • genetics: 611 (rank: 17,456 (tie) out of 33,825)
    • genomics: 50,267 (rank: 120 out of 39,006)
    • molecular biology: 3,921 (rank: 420 out of 18,289)
    • neuroscience: 1,805 (rank: 7,965 (tie) out of 60,488)
    • synthetic biology: 502 (rank: 2,333 (tie) out of 3,670)

Downloads per author, site-wide

Preprints

Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion

genomics more details view paper
  • Downloaded 11,245 times
  • Download rankings, all-time:
    • Site-wide: 173 out of 83,503
    • In genomics: 35 out of 5,407
  • Year to date:
    • Site-wide: 431 out of 83,503
  • Since beginning of last month:
    • Site-wide: 779 out of 83,503

Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation

genomics more details view paper
  • Downloaded 5,452 times
  • Download rankings, all-time:
    • Site-wide: 573 out of 83,503
    • In genomics: 122 out of 5,407
  • Year to date:
    • Site-wide: 34,706 out of 83,503
  • Since beginning of last month:
    • Site-wide: 36,913 out of 83,503

Coupled single-cell CRISPR screening and epigenomic profiling reveals causal gene regulatory networks

genomics more details view paper
  • Downloaded 4,206 times
  • Download rankings, all-time:
    • Site-wide: 924 out of 83,503
    • In genomics: 203 out of 5,407
  • Year to date:
    • Site-wide: 8,604 out of 83,503
  • Since beginning of last month:
    • Site-wide: 7,733 out of 83,503

An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues

genomics more details view paper
  • Downloaded 4,090 times
  • Download rankings, all-time:
    • Site-wide: 973 out of 83,503
    • In genomics: 218 out of 5,407
  • Year to date:
    • Site-wide: 7,184 out of 83,503
  • Since beginning of last month:
    • Site-wide: 5,664 out of 83,503

Landscape of stimulation-responsive chromatin across diverse human immune cells

genomics more details view paper
  • Downloaded 3,598 times
  • Download rankings, all-time:
    • Site-wide: 1,219 out of 83,503
    • In genomics: 269 out of 5,407
  • Year to date:
    • Site-wide: 5,132 out of 83,503
  • Since beginning of last month:
    • Site-wide: 4,931 out of 83,503

Unsupervised clustering and epigenetic classification of single cells

bioinformatics more details view paper
  • Downloaded 3,412 times
  • Download rankings, all-time:
    • Site-wide: 1,335 out of 83,503
    • In bioinformatics: 243 out of 8,009
  • Year to date:
    • Site-wide: 35,420 out of 83,503
  • Since beginning of last month:
    • Site-wide: 54,523 out of 83,503

High-throughput chromatin accessibility profiling at single-cell resolution

genomics more details view paper
  • Downloaded 3,079 times
  • Download rankings, all-time:
    • Site-wide: 1,587 out of 83,503
    • In genomics: 336 out of 5,407
  • Year to date:
    • Site-wide: 21,063 out of 83,503
  • Since beginning of last month:
    • Site-wide: 17,937 out of 83,503

Single-cell epigenomic identification of inherited risk loci in Alzheimer's and Parkinson's disease

genomics more details view paper
  • Downloaded 3,054 times
  • Download rankings, all-time:
    • Site-wide: 1,616 out of 83,503
    • In genomics: 339 out of 5,407
  • Year to date:
    • Site-wide: 240 out of 83,503
  • Since beginning of last month:
    • Site-wide: 1,127 out of 83,503

Large-scale, quantitative protein assays on a high-throughput DNA sequencing chip

molecular biology more details view paper
  • Downloaded 2,892 times
  • Download rankings, all-time:
    • Site-wide: 1,793 out of 83,503
    • In molecular biology: 50 out of 2,801
  • Year to date:
    • Site-wide: 11,058 out of 83,503
  • Since beginning of last month:
    • Site-wide: 10,023 out of 83,503

Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans

genomics more details view paper
  • Downloaded 2,831 times
  • Download rankings, all-time:
    • Site-wide: 1,867 out of 83,503
    • In genomics: 383 out of 5,407
  • Year to date:
    • Site-wide: 27,994 out of 83,503
  • Since beginning of last month:
    • Site-wide: 16,473 out of 83,503

HiChIP: Efficient and sensitive analysis of protein-directed genome architecture

genomics more details view paper
  • Downloaded 2,570 times
  • Download rankings, all-time:
    • Site-wide: 2,195 out of 83,503
    • In genomics: 433 out of 5,407
  • Year to date:
    • Site-wide: 57,243 out of 83,503
  • Since beginning of last month:
    • Site-wide: 41,302 out of 83,503

Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions

genomics more details view paper
  • Downloaded 2,476 times
  • Download rankings, all-time:
    • Site-wide: 2,342 out of 83,503
    • In genomics: 463 out of 5,407
  • Year to date:
    • Site-wide: 76,095 out of 83,503
  • Since beginning of last month:
    • Site-wide: 81,530 out of 83,503

Joint single-cell DNA accessibility and protein epitope profiling reveals environmental regulation of epigenomic heterogeneity

genomics more details view paper
  • Downloaded 2,313 times
  • Download rankings, all-time:
    • Site-wide: 2,633 out of 83,503
    • In genomics: 515 out of 5,407
  • Year to date:
    • Site-wide: 14,474 out of 83,503
  • Since beginning of last month:
    • Site-wide: 14,308 out of 83,503

Identification and mitigation of pervasive off-target activity in CRISPR-Cas9 screens for essential non-coding elements

genomics more details view paper
  • Downloaded 1,864 times
  • Download rankings, all-time:
    • Site-wide: 3,771 out of 83,503
    • In genomics: 678 out of 5,407
  • Year to date:
    • Site-wide: 13,603 out of 83,503
  • Since beginning of last month:
    • Site-wide: 19,408 out of 83,503

High-throughput biochemical profiling reveals Cas9 off-target binding and unbinding heterogeneity

biochemistry more details view paper
  • Downloaded 1,850 times
  • Download rankings, all-time:
    • Site-wide: 3,804 out of 83,503
    • In biochemistry: 89 out of 2,700
  • Year to date:
    • Site-wide: 56,882 out of 83,503
  • Since beginning of last month:
    • Site-wide: 60,934 out of 83,503

High-resolution mapping of cancer cell networks using co-functional interactions

genomics more details view paper
  • Downloaded 1,849 times
  • Download rankings, all-time:
    • Site-wide: 3,810 out of 83,503
    • In genomics: 683 out of 5,407
  • Year to date:
    • Site-wide: 67,605 out of 83,503
  • Since beginning of last month:
    • Site-wide: 67,824 out of 83,503

Single-cell transcriptomic analysis of the adult mouse spinal cord

neuroscience more details view paper
  • Downloaded 1,805 times
  • Download rankings, all-time:
    • Site-wide: 3,962 out of 83,503
    • In neuroscience: 596 out of 14,862
  • Year to date:
    • Site-wide: 406 out of 83,503
  • Since beginning of last month:
    • Site-wide: 381 out of 83,503

High-Resolution Dissection of Conducive Reprogramming Trajectory to Ground State Pluripotency

developmental biology more details view paper
  • Downloaded 1,741 times
  • Download rankings, all-time:
    • Site-wide: 4,229 out of 83,503
    • In developmental biology: 70 out of 2,488
  • Year to date:
    • Site-wide: 37,017 out of 83,503
  • Since beginning of last month:
    • Site-wide: 39,763 out of 83,503

ArchR: An integrative and scalable software package for single-cell chromatin accessibility analysis

genomics more details view paper
  • Downloaded 1,640 times
  • Download rankings, all-time:
    • Site-wide: 4,665 out of 83,503
    • In genomics: 798 out of 5,407
  • Year to date:
    • Site-wide: 458 out of 83,503
  • Since beginning of last month:
    • Site-wide: 248 out of 83,503

Prospects for recurrent neural network models to learn RNA biophysics from high-throughput data

biophysics more details view paper
  • Downloaded 1,325 times
  • Download rankings, all-time:
    • Site-wide: 6,652 out of 83,503
    • In biophysics: 192 out of 3,582
  • Year to date:
    • Site-wide: 25,212 out of 83,503
  • Since beginning of last month:
    • Site-wide: 19,760 out of 83,503

Neutralizing Gatad2a-Chd4-Mbd3 Axis within the NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency

developmental biology more details view paper
  • Downloaded 939 times
  • Download rankings, all-time:
    • Site-wide: 11,692 out of 83,503
    • In developmental biology: 246 out of 2,488
  • Year to date:
    • Site-wide: 59,785 out of 83,503
  • Since beginning of last month:
    • Site-wide: 60,168 out of 83,503

A quantitative and predictive model for RNA binding by human Pumilio proteins

biochemistry more details view paper
  • Downloaded 756 times
  • Download rankings, all-time:
    • Site-wide: 16,293 out of 83,503
    • In biochemistry: 383 out of 2,700
  • Year to date:
    • Site-wide: 27,845 out of 83,503
  • Since beginning of last month:
    • Site-wide: 23,744 out of 83,503

RNA tertiary structure energetics predicted by an ensemble model of the RNA double helix

biophysics more details view paper
  • Downloaded 754 times
  • Download rankings, all-time:
    • Site-wide: 16,361 out of 83,503
    • In biophysics: 545 out of 3,582
  • Year to date:
    • Site-wide: 53,909 out of 83,503
  • Since beginning of last month:
    • Site-wide: 61,021 out of 83,503

Satb1 integrates DNA sequence, shape, motif density and torsional stress to differentially bind targets in nucleosome-dense regions.

molecular biology more details view paper
  • Downloaded 663 times
  • Download rankings, all-time:
    • Site-wide: 19,807 out of 83,503
    • In molecular biology: 627 out of 2,801
  • Year to date:
    • Site-wide: 37,247 out of 83,503
  • Since beginning of last month:
    • Site-wide: 33,471 out of 83,503

Quantitative high-throughput tests of ubiquitous RNA secondary structure prediction algorithms via RNA/protein binding

biophysics more details view paper
  • Downloaded 614 times
  • Download rankings, all-time:
    • Site-wide: 22,119 out of 83,503
    • In biophysics: 794 out of 3,582
  • Year to date:
    • Site-wide: 36,660 out of 83,503
  • Since beginning of last month:
    • Site-wide: 44,424 out of 83,503

Cell cycle dynamics of human pluripotent stem cells primed for differentiation

genetics more details view paper
  • Downloaded 611 times
  • Download rankings, all-time:
    • Site-wide: 22,289 out of 83,503
    • In genetics: 1,419 out of 4,397
  • Year to date:
    • Site-wide: 42,448 out of 83,503
  • Since beginning of last month:
    • Site-wide: 34,022 out of 83,503

Nonparametric analysis of contributions to variance in genomics and epigenomics data

bioinformatics more details view paper
  • Downloaded 509 times
  • Download rankings, all-time:
    • Site-wide: 28,296 out of 83,503
    • In bioinformatics: 3,779 out of 8,009
  • Year to date:
    • Site-wide: 48,806 out of 83,503
  • Since beginning of last month:
    • Site-wide: 48,862 out of 83,503

Crowdsourced RNA design discovers diverse, reversible, efficient, self-contained molecular sensors

synthetic biology more details view paper
  • Downloaded 502 times
  • Download rankings, all-time:
    • Site-wide: 28,831 out of 83,503
    • In synthetic biology: 439 out of 779
  • Year to date:
    • Site-wide: 11,185 out of 83,503
  • Since beginning of last month:
    • Site-wide: 35,366 out of 83,503

INO80 Chromatin Remodelling Coordinates Metabolic Homeostasis with Cell Division

molecular biology more details view paper
  • Downloaded 366 times
  • Download rankings, all-time:
    • Site-wide: 41,059 out of 83,503
    • In molecular biology: 1,300 out of 2,801
  • Year to date:
    • Site-wide: 79,587 out of 83,503
  • Since beginning of last month:
    • Site-wide: 72,753 out of 83,503

PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News