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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 73,741 bioRxiv papers from 320,833 authors.

Author: Jason D Buenrostro

Rankings

  • All-time downloads: 38,742 (rank: 497 out of 320,833)
  • Categories:
    • bioinformatics: 6,701 (rank: 753 out of 27,792)
    • developmental biology: 2,601 (rank: 362 (tie) out of 12,371)
    • genetics: 7,488 (rank: 1,842 out of 31,577)
    • genomics: 21,952 (rank: 308 out of 35,770)

Downloads per author, site-wide

Preprints

Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation

genomics more details view paper
  • Downloaded 5,407 times
  • Download rankings, all-time:
    • Site-wide: 433 out of 73,741
    • In genomics: 106 out of 4,889
  • Year to date:
    • Site-wide: 19,699 out of 73,741
  • Since beginning of last month:
    • Site-wide: 19,699 out of 73,741

Droplet-based combinatorial indexing for massive scale single-cell epigenomics

genomics more details view paper
  • Downloaded 4,438 times
  • Download rankings, all-time:
    • Site-wide: 638 out of 73,741
    • In genomics: 157 out of 4,889
  • Year to date:
    • Site-wide: 1,491 out of 73,741
  • Since beginning of last month:
    • Site-wide: 1,491 out of 73,741

Assessment of computational methods for the analysis of single-cell ATAC-seq data

bioinformatics more details view paper
  • Downloaded 4,188 times
  • Download rankings, all-time:
    • Site-wide: 710 out of 73,741
    • In bioinformatics: 138 out of 7,172
  • Year to date:
    • Site-wide: 1,979 out of 73,741
  • Since beginning of last month:
    • Site-wide: 1,979 out of 73,741

Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types

genetics more details view paper
  • Downloaded 3,915 times
  • Download rankings, all-time:
    • Site-wide: 806 out of 73,741
    • In genetics: 73 out of 4,041
  • Year to date:
    • Site-wide: 14,725 out of 73,741
  • Since beginning of last month:
    • Site-wide: 14,725 out of 73,741

STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of omics data

genomics more details view paper
  • Downloaded 3,520 times
  • Download rankings, all-time:
    • Site-wide: 989 out of 73,741
    • In genomics: 239 out of 4,889
  • Year to date:
    • Site-wide: 15,944 out of 73,741
  • Since beginning of last month:
    • Site-wide: 15,944 out of 73,741

Interrogation of human hematopoiesis at single-cell and single-variant resolution

genetics more details view paper
  • Downloaded 2,889 times
  • Download rankings, all-time:
    • Site-wide: 1,424 out of 73,741
    • In genetics: 131 out of 4,041
  • Year to date:
    • Site-wide: 20,997 out of 73,741
  • Since beginning of last month:
    • Site-wide: 20,997 out of 73,741

Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans

genomics more details view paper
  • Downloaded 2,760 times
  • Download rankings, all-time:
    • Site-wide: 1,535 out of 73,741
    • In genomics: 342 out of 4,889
  • Year to date:
    • Site-wide: 28,324 out of 73,741
  • Since beginning of last month:
    • Site-wide: 28,324 out of 73,741

chromVAR: Inferring transcription factor variation from single-cell epigenomic data

bioinformatics more details view paper
  • Downloaded 2,513 times
  • Download rankings, all-time:
    • Site-wide: 1,831 out of 73,741
    • In bioinformatics: 364 out of 7,172
  • Year to date:
    • Site-wide: 34,320 out of 73,741
  • Since beginning of last month:
    • Site-wide: 34,320 out of 73,741

Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions

genomics more details view paper
  • Downloaded 2,456 times
  • Download rankings, all-time:
    • Site-wide: 1,904 out of 73,741
    • In genomics: 409 out of 4,889
  • Year to date:
    • Site-wide: 56,472 out of 73,741
  • Since beginning of last month:
    • Site-wide: 56,472 out of 73,741

Inference and effects of barcode multiplets in droplet-based single-cell assays

genomics more details view paper
  • Downloaded 2,067 times
  • Download rankings, all-time:
    • Site-wide: 2,582 out of 73,741
    • In genomics: 524 out of 4,889
  • Year to date:
    • Site-wide: 1,832 out of 73,741
  • Since beginning of last month:
    • Site-wide: 1,832 out of 73,741

High-Resolution Dissection of Conducive Reprogramming Trajectory to Ground State Pluripotency

developmental biology more details view paper
  • Downloaded 1,692 times
  • Download rankings, all-time:
    • Site-wide: 3,635 out of 73,741
    • In developmental biology: 58 out of 2,212
  • Year to date:
    • Site-wide: 27,335 out of 73,741
  • Since beginning of last month:
    • Site-wide: 27,335 out of 73,741

AtacWorks: A deep convolutional neural network toolkit for epigenomics

genomics more details view paper
  • Downloaded 1,304 times
  • Download rankings, all-time:
    • Site-wide: 5,630 out of 73,741
    • In genomics: 958 out of 4,889
  • Year to date:
    • Site-wide: 1,826 out of 73,741
  • Since beginning of last month:
    • Site-wide: 1,826 out of 73,741

Neutralizing Gatad2a-Chd4-Mbd3 Axis within the NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency

developmental biology more details view paper
  • Downloaded 909 times
  • Download rankings, all-time:
    • Site-wide: 10,236 out of 73,741
    • In developmental biology: 223 out of 2,212
  • Year to date:
    • Site-wide: 44,494 out of 73,741
  • Since beginning of last month:
    • Site-wide: 44,494 out of 73,741

Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms

genetics more details view paper
  • Downloaded 684 times
  • Download rankings, all-time:
    • Site-wide: 15,651 out of 73,741
    • In genetics: 1,061 out of 4,041
  • Year to date:
    • Site-wide: 60,658 out of 73,741
  • Since beginning of last month:
    • Site-wide: 60,658 out of 73,741

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