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Author: Jason D Buenrostro

Rankings

  • All-time downloads: 44,996 (rank: 788 out of 380,283)
  • Categories:
    • bioinformatics: 7,243 (rank: 936 out of 32,581)
    • developmental biology: 2,702 (rank: 462 (tie) out of 14,715)
    • genetics: 7,812 (rank: 1,962 out of 35,172)
    • genomics: 27,239 (rank: 276 out of 40,588)

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Preprints

Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation

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Droplet-based combinatorial indexing for massive scale single-cell epigenomics

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    • In genomics: 168 out of 5,656
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    • Site-wide: 2,893 out of 88,687
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    • Site-wide: 7,773 out of 88,687

Assessment of computational methods for the analysis of single-cell ATAC-seq data

bioinformatics more details view paper
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    • In bioinformatics: 145 out of 8,385
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Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types

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    • In genetics: 84 out of 4,596
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Chromatin potential identified by shared single cell profiling of RNA and chromatin

genomics more details view paper
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    • In genomics: 274 out of 5,656
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STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of omics data

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Interrogation of human hematopoiesis at single-cell and single-variant resolution

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Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans

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    • Site-wide: 24,027 out of 88,687

chromVAR: Inferring transcription factor variation from single-cell epigenomic data

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    • Site-wide: 38,071 out of 88,687

Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions

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    • Site-wide: 45,589 out of 88,687

Inference and effects of barcode multiplets in droplet-based single-cell assays

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    • In genomics: 561 out of 5,656
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    • Site-wide: 16,654 out of 88,687

AtacWorks: A deep convolutional neural network toolkit for epigenomics

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    • Site-wide: 3,837 out of 88,687

High-Resolution Dissection of Conducive Reprogramming Trajectory to Ground State Pluripotency

developmental biology more details view paper
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    • In developmental biology: 75 out of 2,645
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    • Site-wide: 66,479 out of 88,687

Neutralizing Gatad2a-Chd4-Mbd3 Axis within the NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency

developmental biology more details view paper
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    • In developmental biology: 263 out of 2,645
  • Year to date:
    • Site-wide: 66,351 out of 88,687
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    • Site-wide: 73,591 out of 88,687

Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms

genetics more details view paper
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    • Site-wide: 18,711 out of 88,687
    • In genetics: 1,193 out of 4,596
  • Year to date:
    • Site-wide: 69,743 out of 88,687
  • Since beginning of last month:
    • Site-wide: 46,741 out of 88,687

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