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Author: Bing Ren

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    • bioinformatics: 9,629 (rank: 567 out of 31,499)
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    • genetics: 689 (rank: 16,253 (tie) out of 34,066)
    • genomics: 48,782 (rank: 126 out of 39,231)
    • neuroscience: 7,865 (rank: 1,050 out of 61,220)
    • systems biology: 615 (rank: 4,706 (tie) out of 10,828)

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Preprints

Pancreatic progenitor epigenome maps prioritize type 2 diabetes risk genes with roles in development

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Multi-platform discovery of haplotype-resolved structural variation in human genomes

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Fast and Accurate Clustering of Single Cell Epigenomes Reveals Cis-Regulatory Elements in Rare Cell Types

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Single nucleus analysis of the chromatin landscape in mouse forebrain development

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Preservation of Chromatin Organization after Acute Loss of CTCF in Mouse Embryonic Stem Cells

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Systematic mapping of chromatin state landscapes during mouse development

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The 4D Nucleome Project

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MAPPING OF LONG-RANGE CHROMATIN INTERACTIONS BY PROXIMITY LIGATION ASSISTED CHIP-SEQ

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3D Chromatin Architecture Remodeling during Human Cardiomyocyte Differentiation Reveals A Role Of HERV-H In Demarcating Chromatin Domains

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An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

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Histone H3 Lysine 4 methyltransferases MLL3 and MLL4 Modulate Long-range Chromatin Interactions at Enhancers

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Simultaneous profiling of DNA methylation and chromatin architecture in mixed populations and in single cells

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Cell type-specific enhancer-promoter connectivity maps in the human brain and disease risk association

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Single nucleus multi-omics links human cortical cell regulatory genome diversity to disease risk variants

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DNA Methylation Atlas of the Mouse Brain at Single-Cell Resolution

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The human functional genome defined by genetic diversity

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Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

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Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus

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Comparing 3D genome organization in multiple species using Phylo-HMRF

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An Atlas of Gene Regulatory Elements in Adult Mouse Cerebrum

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Pancreatic islet chromatin accessibility and conformation defines distal enhancer networks of type 2 diabetes risk

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Common DNA sequence variation influences 3-dimensional conformation of the human genome

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Identification of essential regulatory elements in the human genome

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Single-cell chromatin accessibility analysis of mammary gland development reveals cell state transcriptional regulators and cellular lineage relationships

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MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

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LSD1/KDM1A Maintains Genome-wide Homeostasis of Transcriptional Enhancers

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CTCF Promotes Long-range Enhancer-promoter Interactions and Lineage-specific Gene Expression in Mammalian Cells

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DNA replication-mediated error correction of ectopic CENP-A deposition maintains centromere identity

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Iterative Refinement of Cellular Identity from Single-Cell Data Using Online Learning

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HUGIn: Hi-C Unifying Genomic Interrogator

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An Array of 60,000 Antibodies for Proteome-Scale Antibody Generation and Target Discovery

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FIREcaller: an R package for detecting frequently interacting regions from Hi-C data

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