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Author: Marc A Marti-Renom

Rankings

  • All-time downloads: 22,513 (rank: 2,758 (tie) out of 427,818)
  • Categories:
    • bioinformatics: 5,663 (rank: 1,716 out of 36,255)
    • biophysics: 1,540 (rank: 2,068 (tie) out of 18,229)
    • cancer biology: 226 (rank: 23,160 (tie) out of 30,505)
    • cell biology: 760 (rank: 8,957 (tie) out of 33,008)
    • genetics: 3,038 (rank: 5,532 (tie) out of 38,046)
    • genomics: 7,126 (rank: 2,507 out of 44,718)
    • molecular biology: 4,160 (rank: 555 out of 23,548)

Downloads per author, site-wide

Preprints

Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling

genetics more details view paper
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    • In genetics: 154 out of 5,036
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Transcription Factors Orchestrate Dynamic Interplay Between Genome Topology And Gene Regulation During Cell Reprogramming

molecular biology more details view paper
  • Downloaded 2,654 times
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    • Site-wide: 2,621 out of 101,301
    • In molecular biology: 92 out of 3,516
  • Year to date:
    • Site-wide: 32,600 out of 101,301
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    • Site-wide: 60,524 out of 101,301

Human pancreatic islet 3D chromatin architecture provides insights into the genetics of type 2 diabetes

genomics more details view paper
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    • In genomics: 544 out of 6,276
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Structural features of the fly chromatin colors revealed by automatic three-dimensional modeling.

bioinformatics more details view paper
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    • In bioinformatics: 1,134 out of 9,292
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Parallel sequencing lives, or what makes large sequencing projects successful

bioinformatics more details view paper
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    • In bioinformatics: 1,160 out of 9,292
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Spatial RNA proximities reveal a bipartite nuclear transcriptome and territories of differential density and transcription elongation rates

molecular biology more details view paper
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    • In molecular biology: 244 out of 3,516
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Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromosome organization

genomics more details view paper
  • Downloaded 1,498 times
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    • In genomics: 1,058 out of 6,276
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    • Site-wide: 63,749 out of 101,301

Single-cell absolute contact probability detection reveals that chromosomes are organized by multiple, low-frequency yet specific interactions

biophysics more details view paper
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    • In biophysics: 288 out of 4,468
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    • Site-wide: 71,153 out of 101,301

Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation

genomics more details view paper
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    • Site-wide: 10,272 out of 101,301
    • In genomics: 1,454 out of 6,276
  • Year to date:
    • Site-wide: 7,058 out of 101,301
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    • Site-wide: 9,219 out of 101,301

Distinct structural transitions of chromatin topological domains coordinate hormone-induced gene regulation

genomics more details view paper
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    • In genomics: 1,459 out of 6,276
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    • Site-wide: 98,750 out of 101,301
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    • Site-wide: 99,039 out of 101,301

Atlas of transcriptionally active transposable elements in human adult tissues

genomics more details view paper
  • Downloaded 806 times
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    • Site-wide: 18,915 out of 101,301
    • In genomics: 2,265 out of 6,276
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Binless normalization of Hi-C data provides significant interaction and difference detection independently of resolution

bioinformatics more details view paper
  • Downloaded 777 times
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    • Site-wide: 20,006 out of 101,301
    • In bioinformatics: 2,922 out of 9,292
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    • Site-wide: 91,359 out of 101,301
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    • Site-wide: 82,723 out of 101,301

Impact of chromosome fusions on 3D genome organization and gene expression in budding yeast

cell biology more details view paper
  • Downloaded 760 times
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    • Site-wide: 20,593 out of 101,301
    • In cell biology: 897 out of 5,245
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    • Site-wide: 62,655 out of 101,301

Dynamic simulations of transcriptional control during cell reprogramming reveal spatial chromatin caging

bioinformatics more details view paper
  • Downloaded 590 times
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    • Site-wide: 29,554 out of 101,301
    • In bioinformatics: 3,904 out of 9,292
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    • Site-wide: 47,029 out of 101,301
  • Since beginning of last month:
    • Site-wide: 70,259 out of 101,301

OneD: increasing reproducibility of Hi-C Samples with abnormal karyotypes

bioinformatics more details view paper
  • Downloaded 556 times
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    • Site-wide: 31,923 out of 101,301
    • In bioinformatics: 4,136 out of 9,292
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    • Site-wide: 91,108 out of 101,301

Hierarchical chromatin organization detected by TADpole.

bioinformatics more details view paper
  • Downloaded 478 times
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    • In bioinformatics: 4,748 out of 9,292
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Polymer modelling unveils the roles of heterochromatin and nucleolar organizing regions in shaping 3D genome organization in Arabidopsis thaliana

biophysics more details view paper
  • Downloaded 286 times
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    • In biophysics: 2,735 out of 4,468
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    • Site-wide: 33,283 out of 101,301

STAG2 loss-of-function affects short-range genomic contacts and modulates urothelial differentiation in bladder cancer cells

cancer biology more details view paper
  • Downloaded 226 times
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    • Site-wide: 74,114 out of 101,301
    • In cancer biology: 2,487 out of 3,632
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    • Site-wide: 25,040 out of 101,301
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    • Site-wide: 32,407 out of 101,301

Identification of chromatin loops from Hi-C interaction matrices by CTCF-CTCF topology classification

bioinformatics more details view paper
  • Downloaded 121 times
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    • Site-wide: 91,221 out of 101,301
    • In bioinformatics: 8,665 out of 9,292
  • Year to date:
    • Site-wide: 52,961 out of 101,301
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    • Site-wide: 25,332 out of 101,301

3D reconstruction of genomic regions from sparse interaction data

bioinformatics more details view paper
  • Downloaded 96 times
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    • Site-wide: 94,253 out of 101,301
    • In bioinformatics: 8,870 out of 9,292
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    • Site-wide: 65,889 out of 101,301
  • Since beginning of last month:
    • Site-wide: 7,607 out of 101,301

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