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Author: Jeffrey J. Gray

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  • All-time downloads: 8,854 (rank: 6,990 (tie) out of 338,259)
  • Categories:
    • biophysics: 8,556 (rank: 64 out of 13,579)
    • immunology: 298 (rank: 9,811 (tie) out of 16,878)

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Preprints

The Rosetta all-atom energy function for macromolecular modeling and design

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Modeling and docking antibody structures with Rosetta

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Protein structure prediction and design in a biologically-realistic implicit membrane

biophysics more details view paper
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Efficient Flexible Backbone Protein-Protein Docking for Challenging Targets

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Comparison Of NMR And Crystal Structures Of Membrane Proteins And Computational Refinement To Improve Model Quality

biophysics more details view paper
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    • Site-wide: 50,164 out of 78,097

Flexible backbone assembly and refinement of symmetrical homomeric complexes

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Geometric Potentials from Deep Learning Improve Prediction of CDR H3 Loop Structures

biophysics more details view paper
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    • Site-wide: 1,780 out of 78,097

Repertoire analysis of antibody CDR-H3 loops suggests affinity maturation does not typically result in rigidification

biophysics more details view paper
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    • Site-wide: 67,370 out of 78,097

Toward computational design of protein crystals with improved resolution

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    • In biophysics: 1,545 out of 3,324
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    • Site-wide: 44,419 out of 78,097

Affinity-engineered human antibodies detect celiac disease gluten pMHC complexes and inhibit T-cell activation

immunology more details view paper
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    • In immunology: 1,046 out of 2,104
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    • Site-wide: 11,948 out of 78,097

Novel sampling strategies and a coarse-grained score function for docking homomers, flexible heteromers, and oligosaccharides using Rosetta in CAPRI Rounds 37–45

biophysics more details view paper
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    • In biophysics: 2,546 out of 3,324
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    • Site-wide: 36,095 out of 78,097
  • Since beginning of last month:
    • Site-wide: 35,233 out of 78,097

Protein Docking and Steered Molecular Dynamics Reveal Alternative Regulatory Sites on the SERCA Calcium Transporter

biophysics more details view paper
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    • Site-wide: 43,106 out of 78,097

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