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Author: Yaron Orenstein

Rankings

  • All-time downloads: 4,505 (rank: 23,289 (tie) out of 404,161)
  • Categories:
    • bioinformatics: 3,118 (rank: 3,377 (tie) out of 34,272)
    • biophysics: 1,091 (rank: 2,909 (tie) out of 16,811)
    • synthetic biology: 296 (rank: 3,614 (tie) out of 4,220)

Downloads per author, site-wide

Preprints

Comprehensive, high-resolution binding energy landscapes reveal context dependencies of transcription factor binding

biophysics more details view paper
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    • In biophysics: 332 out of 4,144
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    • Site-wide: 74,434 out of 94,912
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    • Site-wide: 71,567 out of 94,912

A Deep Learning Approach for Learning Intrinsic Protein-RNA Binding Preferences

bioinformatics more details view paper
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    • In bioinformatics: 2,174 out of 8,837
  • Year to date:
    • Site-wide: 56,555 out of 94,912
  • Since beginning of last month:
    • Site-wide: 53,889 out of 94,912

Improving the performance of minimizers and winnowing schemes

bioinformatics more details view paper
  • Downloaded 623 times
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    • Site-wide: 25,129 out of 94,912
    • In bioinformatics: 3,467 out of 8,837
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    • Site-wide: 86,846 out of 94,912
  • Since beginning of last month:
    • Site-wide: 56,807 out of 94,912

HTS-IBIS: fast and accurate inference of binding site motifs from HT-SELEX data

bioinformatics more details view paper
  • Downloaded 472 times
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    • In bioinformatics: 4,486 out of 8,837
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    • Site-wide: 48,513 out of 94,912

Sequence biases in CLIP experimental data are incorporated in protein RNA-binding models

bioinformatics more details view paper
  • Downloaded 382 times
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    • In bioinformatics: 5,317 out of 8,837
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    • Site-wide: 83,832 out of 94,912
  • Since beginning of last month:
    • Site-wide: 77,133 out of 94,912

DeCoDe: degenerate codon design for complete protein-coding DNA libraries

bioinformatics more details view paper
  • Downloaded 362 times
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    • In bioinformatics: 5,523 out of 8,837
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    • Site-wide: 29,053 out of 94,912

A randomized parallel algorithm for efficiently finding near-optimal universal hitting sets

bioinformatics more details view paper
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    • In bioinformatics: 5,538 out of 8,837
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    • Site-wide: 9,077 out of 94,912
  • Since beginning of last month:
    • Site-wide: 25,878 out of 94,912

Overcoming the design, build, test (DBT) bottleneck for synthesis of nonrepetitive protein-RNA binding cassettes for RNA applications

synthetic biology more details view paper
  • Downloaded 296 times
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    • Site-wide: 57,150 out of 94,912
    • In synthetic biology: 715 out of 885
  • Year to date:
    • Site-wide: 17,752 out of 94,912
  • Since beginning of last month:
    • Site-wide: 33,997 out of 94,912

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