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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,872 bioRxiv papers from 309,253 authors.

Author: Nicola Segata

Rankings

  • All-time downloads: 9,617 (rank: 5,112 (tie) out of 309,294)
  • Categories:
    • bioinformatics: 3,366 (rank: 2,242 (tie) out of 26,873)
    • epidemiology: 831 (rank: 1,385 (tie) out of 9,541)
    • microbiology: 5,420 (rank: 179 out of 32,124)

Downloads per author, site-wide

Preprints

Accessible, curated metagenomic data through ExperimentHub

bioinformatics more details view paper
  • Downloaded 2,098 times
  • Download rankings, all-time:
    • Site-wide: 2,380 out of 70,881
    • In bioinformatics: 477 out of 6,940
  • Year to date:
    • Site-wide: 10,051 out of 70,881
  • Since beginning of last month:
    • Site-wide: 20,582 out of 70,881

A unified sequence catalogue of over 280,000 genomes obtained from the human gut microbiome

microbiology more details view paper
  • Downloaded 2,053 times
  • Download rankings, all-time:
    • Site-wide: 2,478 out of 70,881
    • In microbiology: 66 out of 5,759
  • Year to date:
    • Site-wide: 805 out of 70,881
  • Since beginning of last month:
    • Site-wide: 555 out of 70,881

The Prevotella copri complex comprises four distinct clades that are underrepresented in Westernised populations

microbiology more details view paper
  • Downloaded 1,361 times
  • Download rankings, all-time:
    • Site-wide: 4,987 out of 70,881
    • In microbiology: 172 out of 5,759
  • Year to date:
    • Site-wide: 13,414 out of 70,881
  • Since beginning of last month:
    • Site-wide: 8,446 out of 70,881

HMP16SData: Efficient Access to the Human Microbiome Project through Bioconductor

bioinformatics more details view paper
  • Downloaded 1,268 times
  • Download rankings, all-time:
    • Site-wide: 5,602 out of 70,881
    • In bioinformatics: 1,061 out of 6,940
  • Year to date:
    • Site-wide: 5,423 out of 70,881
  • Since beginning of last month:
    • Site-wide: 9,595 out of 70,881

Studying vertical microbiome transmission from mothers to infants by strain-level metagenomic profiling

microbiology more details view paper
  • Downloaded 997 times
  • Download rankings, all-time:
    • Site-wide: 8,338 out of 70,881
    • In microbiology: 353 out of 5,759
  • Year to date:
    • Site-wide: 57,117 out of 70,881
  • Since beginning of last month:
    • Site-wide: 65,588 out of 70,881

Sociodemographic patterning in the oral microbiome of a diverse sample of New Yorkers

epidemiology more details view paper
  • Downloaded 559 times
  • Download rankings, all-time:
    • Site-wide: 19,717 out of 70,881
    • In epidemiology: 241 out of 1,556
  • Year to date:
    • Site-wide: 18,673 out of 70,881
  • Since beginning of last month:
    • Site-wide: 27,251 out of 70,881

Distinct polysaccharide growth profiles of human intestinal Prevotella copri isolates

microbiology more details view paper
  • Downloaded 458 times
  • Download rankings, all-time:
    • Site-wide: 25,354 out of 70,881
    • In microbiology: 1,418 out of 5,759
  • Year to date:
    • Site-wide: 5,087 out of 70,881
  • Since beginning of last month:
    • Site-wide: 3,048 out of 70,881

Taxonomic and functional dynamics of lung microbiome in cystic fibrosis patients chronically infected with Pseudomonas aeruginosa

microbiology more details view paper
  • Downloaded 396 times
  • Download rankings, all-time:
    • Site-wide: 29,872 out of 70,881
    • In microbiology: 1,768 out of 5,759
  • Year to date:
    • Site-wide: 25,245 out of 70,881
  • Since beginning of last month:
    • Site-wide: 25,312 out of 70,881

Tobacco exposure associated with oral microbiota oxygen utilization in the New York City Health and Nutrition Examination Study

epidemiology more details view paper
  • Downloaded 272 times
  • Download rankings, all-time:
    • Site-wide: 42,402 out of 70,881
    • In epidemiology: 731 out of 1,556
  • Year to date:
    • Site-wide: 32,400 out of 70,881
  • Since beginning of last month:
    • Site-wide: 23,983 out of 70,881

The signal and the noise - characteristics of antisense RNA in complex microbial communities

microbiology more details view paper
  • Downloaded 155 times
  • Download rankings, all-time:
    • Site-wide: 58,743 out of 70,881
    • In microbiology: 4,351 out of 5,759
  • Year to date:
    • Site-wide: 28,685 out of 70,881
  • Since beginning of last month:
    • Site-wide: 33,947 out of 70,881

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