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Author: Nicola Segata

Rankings

  • All-time downloads: 12,633 (rank: 6,205 (tie) out of 404,161)
  • Categories:
    • bioinformatics: 3,701 (rank: 2,748 (tie) out of 34,272)
    • epidemiology: 1,078 (rank: 1,313 (tie) out of 9,545)
    • evolutionary biology: 179 (rank: 18,250 (tie) out of 20,691)
    • genomics: 102 (rank: 41,871 (tie) out of 42,763)
    • microbiology: 7,573 (rank: 1,015 out of 46,811)

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Preprints

A unified sequence catalogue of over 280,000 genomes obtained from the human gut microbiome

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Accessible, curated metagenomic data through ExperimentHub

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The Prevotella copri complex comprises four distinct clades that are underrepresented in Westernised populations

microbiology more details view paper
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HMP16SData: Efficient Access to the Human Microbiome Project through Bioconductor

bioinformatics more details view paper
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Studying vertical microbiome transmission from mothers to infants by strain-level metagenomic profiling

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Distinct polysaccharide growth profiles of human intestinal Prevotella copri isolates

microbiology more details view paper
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Sociodemographic patterning in the oral microbiome of a diverse sample of New Yorkers

epidemiology more details view paper
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Taxonomic variability over functional stability in the microbiome of Cystic Fibrosis patients chronically infected by Pseudomonas aeruginosa

microbiology more details view paper
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Tobacco exposure associated with oral microbiota oxygen utilization in the New York City Health and Nutrition Examination Study

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The signal and the noise - characteristics of antisense RNA in complex microbial communities

microbiology more details view paper
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The diverging evolutionary history of opsin genes in Diptera

evolutionary biology more details view paper
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    • In evolutionary biology: 4,883 out of 5,736
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Strengthening The Organizing and Reporting of Microbiome Studies (STORMS)

genomics more details view paper
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    • In genomics: 5,685 out of 5,955
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