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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 59,744 bioRxiv papers from 265,577 authors.

Author: Michael M. Hoffman

Rankings

  • All-time downloads: 66,918 (rank: 167 out of 265,632)
  • Categories:
    • bioinformatics: 61,166 (rank: 6 out of 23,689)
    • genomics: 5,752 (rank: 1,932 out of 31,074)

Downloads per author, site-wide

Preprints

Opportunities And Obstacles For Deep Learning In Biology And Medicine

bioinformatics more details view paper
  • Downloaded 50,610 times
  • Download rankings, all-time:
    • Site-wide: 7 out of 59,758
    • In bioinformatics: 1 out of 6,035
  • Year to date:
    • Site-wide: 86 out of 59,758
  • Since beginning of last month:
    • Site-wide: 389 out of 59,758

Virtual ChIP-seq: Predicting transcription factor binding by learning from the transcriptome

bioinformatics more details view paper
  • Downloaded 4,442 times
  • Download rankings, all-time:
    • Site-wide: 482 out of 59,758
    • In bioinformatics: 99 out of 6,035
  • Year to date:
    • Site-wide: 395 out of 59,758
  • Since beginning of last month:
    • Site-wide: 2,128 out of 59,758

A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types

genomics more details view paper
  • Downloaded 2,155 times
  • Download rankings, all-time:
    • Site-wide: 1,864 out of 59,758
    • In genomics: 407 out of 4,155
  • Year to date:
    • Site-wide: 8,624 out of 59,758
  • Since beginning of last month:
    • Site-wide: 5,981 out of 59,758

Semi-automated genome annotation using epigenomic data and Segway

bioinformatics more details view paper
  • Downloaded 1,717 times
  • Download rankings, all-time:
    • Site-wide: 2,770 out of 59,758
    • In bioinformatics: 562 out of 6,035
  • Year to date:
    • Site-wide: 15,676 out of 59,758
  • Since beginning of last month:
    • Site-wide: 14,129 out of 59,758

Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet

bioinformatics more details view paper
  • Downloaded 1,663 times
  • Download rankings, all-time:
    • Site-wide: 2,921 out of 59,758
    • In bioinformatics: 593 out of 6,035
  • Year to date:
    • Site-wide: 13,731 out of 59,758
  • Since beginning of last month:
    • Site-wide: 11,434 out of 59,758

Functional Annotation of Human Long Non-Coding RNAs via Molecular Phenotyping

genomics more details view paper
  • Downloaded 1,294 times
  • Download rankings, all-time:
    • Site-wide: 4,431 out of 59,758
    • In genomics: 799 out of 4,155
  • Year to date:
    • Site-wide: 761 out of 59,758
  • Since beginning of last month:
    • Site-wide: 841 out of 59,758

DNAmod: the DNA modification database

bioinformatics more details view paper
  • Downloaded 1,291 times
  • Download rankings, all-time:
    • Site-wide: 4,447 out of 59,758
    • In bioinformatics: 882 out of 6,035
  • Year to date:
    • Site-wide: 15,224 out of 59,758
  • Since beginning of last month:
    • Site-wide: 18,185 out of 59,758

Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell type-specific expression

genomics more details view paper
  • Downloaded 1,238 times
  • Download rankings, all-time:
    • Site-wide: 4,729 out of 59,758
    • In genomics: 839 out of 4,155
  • Year to date:
    • Site-wide: 51,789 out of 59,758
  • Since beginning of last month:
    • Site-wide: 56,485 out of 59,758

Umap and Bismap: quantifying genome and methylome mappability

genomics more details view paper
  • Downloaded 1,065 times
  • Download rankings, all-time:
    • Site-wide: 6,130 out of 59,758
    • In genomics: 1,024 out of 4,155
  • Year to date:
    • Site-wide: 35,152 out of 59,758
  • Since beginning of last month:
    • Site-wide: 41,969 out of 59,758

BEHST: genomic set enrichment analysis enhanced through integration of chromatin long-range interactions

bioinformatics more details view paper
  • Downloaded 899 times
  • Download rankings, all-time:
    • Site-wide: 7,978 out of 59,758
    • In bioinformatics: 1,421 out of 6,035
  • Year to date:
    • Site-wide: 1,503 out of 59,758
  • Since beginning of last month:
    • Site-wide: 13,454 out of 59,758

Segway 2.0: Gaussian mixture models and minibatch training

bioinformatics more details view paper
  • Downloaded 444 times
  • Download rankings, all-time:
    • Site-wide: 20,980 out of 59,758
    • In bioinformatics: 3,053 out of 6,035
  • Year to date:
    • Site-wide: 54,834 out of 59,758
  • Since beginning of last month:
    • Site-wide: 50,208 out of 59,758

Motif elucidation in ChIP-seq datasets with a knockout control

bioinformatics more details view paper
  • Downloaded 100 times
  • Download rankings, all-time:
    • Site-wide: 54,419 out of 59,758
    • In bioinformatics: 5,733 out of 6,035
  • Year to date:
    • Site-wide: 35,828 out of 59,758
  • Since beginning of last month:
    • Site-wide: 3,049 out of 59,758

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