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Author: José N. Onuchic

  • Most recently observed institution: Center for Theoretical Biological Physics, Rice University

Rankings

  • All-time downloads: 13,780 (rank: 14,544 (tie) )
  • Categories:
    • bioinformatics: 479 (rank: 26,794 (tie) )
    • biophysics: 2,266 (rank: 1,733 (tie) )
    • cancer biology: 2,352 (rank: 2,385 (tie) )
    • genetics: 3,113 (rank: 6,077 (tie) )
    • pharmacology and toxicology: 3,335 (rank: 224 (tie) )
    • systems biology: 2,235 (rank: 1,931 (tie) )

Downloads per author, site-wide

Preprints

Enhancing Intracellular Accumulation and Target Engagement of PROTACs with Reversible Covalent Chemistry

pharmacology and toxicology more details view paper
  • Downloaded 3,335 times
  • Download rankings, all-time:
    • Site-wide: 3,871
    • In pharmacology and toxicology: 21
  • Year to date:
    • Site-wide: 22,040
  • Since beginning of last month:
    • Site-wide: 34,623

Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling

genetics more details view paper
  • Downloaded 3,113 times
  • Download rankings, all-time:
    • Site-wide: 4,258
    • In genetics: 171
  • Year to date:
    • Site-wide: 81,007
  • Since beginning of last month:
    • Site-wide: 80,073

NRF2 activates a partial Epithelial-Mesenchymal Transition and is maximally present in a hybrid Epithelial/Mesenchymal phenotype

cancer biology more details view paper
  • Downloaded 1,165 times
  • Download rankings, all-time:
    • Site-wide: 18,153
    • In cancer biology: 412
  • Year to date:
    • Site-wide: 70,344
  • Since beginning of last month:
    • Site-wide: 43,930

Testing the Gene Expression Classification of the EMT Spectrum

systems biology more details view paper
  • Downloaded 832 times
  • Download rankings, all-time:
    • Site-wide: 29,565
    • In systems biology: 630
  • Year to date:
    • Site-wide: 81,054
  • Since beginning of last month:
    • Site-wide: 102,967

A Transferable Model For Chromosome Architecture

biophysics more details view paper
  • Downloaded 807 times
  • Download rankings, all-time:
    • Site-wide: 30,852
    • In biophysics: 923
  • Year to date:
    • Site-wide: 123,631
  • Since beginning of last month:
    • Site-wide: 109,965

Exploring Chromosomal Structural Heterogeneity Across Multiple Cell Lines

biophysics more details view paper
  • Downloaded 707 times
  • Download rankings, all-time:
    • Site-wide: 37,011
    • In biophysics: 1,172
  • Year to date:
    • Site-wide: 89,589
  • Since beginning of last month:
    • Site-wide: 105,790

PAGE4 and Conformational Switching: Insights from Molecular Dynamics Simulations and Implications for Prostate Cancer

biophysics more details view paper
  • Downloaded 519 times
  • Download rankings, all-time:
    • Site-wide: 54,533
    • In biophysics: 1,850
  • Year to date:
    • Site-wide: 112,204
  • Since beginning of last month:
    • Site-wide: 139,151

Towards Decoding the Metabolic Plasticity in Cancer: Coupling of Gene Regulation and Metabolic Pathways

systems biology more details view paper
  • Downloaded 500 times
  • Download rankings, all-time:
    • Site-wide: 56,917
    • In systems biology: 1,330
  • Year to date:
    • Site-wide: 136,061
  • Since beginning of last month:
    • Site-wide: 141,598

The Nucleome Data Bank: Web-based Resources to Simulate and Analyze the Three-Dimensional Genome

bioinformatics more details view paper
  • Downloaded 479 times
  • Download rankings, all-time:
    • Site-wide: 59,652
    • In bioinformatics: 5,931
  • Year to date:
    • Site-wide: 109,237
  • Since beginning of last month:
    • Site-wide: 128,043

RACIPE: A computational tool for Modeling Gene Regulatory Circuits using Randomization

systems biology more details view paper
  • Downloaded 455 times
  • Download rankings, all-time:
    • Site-wide: 63,089
    • In systems biology: 1,485
  • Year to date:
    • Site-wide: 123,754
  • Since beginning of last month:
    • Site-wide: 140,826

A mechanism-based computational model to capture the interconnections among epithelial-mesenchymal transition, cancer stem cells and Notch-Jagged signaling

cancer biology more details view paper
  • Downloaded 449 times
  • Download rankings, all-time:
    • Site-wide: 63,988
    • In cancer biology: 1,825
  • Year to date:
    • Site-wide: 111,354
  • Since beginning of last month:
    • Site-wide: 96,417

Drug-tolerant idling melanoma cells exhibit theory-predicted metabolic low-low phenotype

systems biology more details view paper
  • Downloaded 448 times
  • Download rankings, all-time:
    • Site-wide: 64,186
    • In systems biology: 1,509
  • Year to date:
    • Site-wide: 114,838
  • Since beginning of last month:
    • Site-wide: 116,906

Numb prevents a complete EMT by modulating Notch signalling

cancer biology more details view paper
  • Downloaded 385 times
  • Download rankings, all-time:
    • Site-wide: 74,440
    • In cancer biology: 2,170
  • Year to date:
    • Site-wide: 110,380
  • Since beginning of last month:
    • Site-wide: 109,130

Distinguishing Mechanisms Underlying EMT Tristability

cancer biology more details view paper
  • Downloaded 353 times
  • Download rankings, all-time:
    • Site-wide: 80,550
    • In cancer biology: 2,389
  • Year to date:
    • Site-wide: 131,678
  • Since beginning of last month:
    • Site-wide: 100,997

Modeling Mayaro and Chikungunya Control Strategies in Rio de Janeiro Outbreaks

biophysics more details view paper
  • Downloaded 233 times
  • Download rankings, all-time:
    • Site-wide: 106,639
    • In biophysics: 4,122
  • Year to date:
    • Site-wide: 134,448
  • Since beginning of last month:
    • Site-wide: 137,323

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