Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 52,871 bioRxiv papers from 244,990 authors.

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Preprints

The Molecular and Microbial Microenvironments in Chronically Diseased Lungs

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MASST: A Web-based Basic Mass Spectrometry Search Tool for Molecules to Search Public Data.

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  • In bioinformatics: 67 out of 5,523
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  • Site-wide: 130 out of 52,871

Evaluating the information content of shallow shotgun metagenomics

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  • In genomics: 218 out of 3,774
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American Gut: an Open Platform for Citizen-Science Microbiome Research

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  • In microbiology: 19 out of 4,144
• Year to date:
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  • Site-wide: 7,233 out of 52,871

BugBase Predicts Organism Level Microbiome Phenotypes

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  • In bioinformatics: 320 out of 5,523
• Year to date:
  • Site-wide: 3,315 out of 52,871
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  • Site-wide: 4,362 out of 52,871

Dramatic differences in gut bacterial densities help to explain the relationship between diet and habitat in rainforest ants

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  • In ecology: 142 out of 2,192
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Metagenomic covariation along densely sampled environmental gradients in the Red Sea

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  • In microbiology: 263 out of 4,144
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Quantifying and understanding well-to-well contamination in microbiome research

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  • In genomics: 1,167 out of 3,774
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Links between environment, diet, and the hunter-gatherer microbiome

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  • In microbiology: 320 out of 4,144
• Year to date:
  • Site-wide: 7,250 out of 52,871
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  • Site-wide: 8,248 out of 52,871

Bacterial community composition and dynamics spanning five years in freshwater bog lakes

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  • In microbiology: 398 out of 4,144
• Year to date:
  • Site-wide: 35,956 out of 52,871
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  • Site-wide: 41,533 out of 52,871

Age and sex-dependent patterns of gut microbial diversity in human adults

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  • In microbiology: 481 out of 4,144
• Year to date:
  • Site-wide: 1,390 out of 52,871
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The development of gut microbiota in ostriches and its association with juvenile growth

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  • In microbiology: 518 out of 4,144
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  • Site-wide: 9,427 out of 52,871
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  • Site-wide: 10,383 out of 52,871

Chemical Impacts of the Microbiome Across Scales Reveal Novel Conjugated Bile Acids

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  • In microbiology: 613 out of 4,144
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Species abundance information improves sequence taxonomy classification accuracy

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  • In bioinformatics: 2,268 out of 5,523
• Year to date:
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MetaRiPPquest: A Peptidogenomics Approach for the Discovery of Ribosomally Synthesized and Post-translationally Modified Peptides

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  • In bioinformatics: 2,286 out of 5,523
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  • Site-wide: 22,477 out of 52,871

Microbial biogeography and ecology of the mouth and implications for periodontal diseases

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  • In ecology: 840 out of 2,192
• Year to date:
  • Site-wide: 5,003 out of 52,871
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  • Site-wide: 7,259 out of 52,871

Multiple sclerosis-associated changes in the composition and immune functions of spore-forming bacteria

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  • In immunology: 588 out of 1,220
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  • Site-wide: 41,390 out of 52,871

Red Sea SAR11 and Prochlorococcus Single-cell Genomes Reflect Globally Distributed Pangenomes

• Downloaded 190 times
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  • Site-wide: 36,466 out of 52,871
  • In microbiology: 2,414 out of 4,144
• Year to date:
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