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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 57,381 bioRxiv papers from 264,204 authors.

Author: James S. Fraser

Rankings

  • All-time downloads: 13,836 (rank: 2,087 out of 264,204)
  • Categories:
    • biochemistry: 1,870 (rank: 291 (tie) out of 9,571)
    • bioinformatics: 451 (rank: 13,431 (tie) out of 23,111)
    • biophysics: 10,878 (rank: 10 out of 9,839)
    • cancer biology: 637 (rank: 4,167 (tie) out of 15,221)

Downloads per author, site-wide

Preprints

A multi-model approach to assessing local and global cryo-EM map quality

biophysics more details view paper
  • Downloaded 1,593 times
  • Download rankings, all-time:
    • Site-wide: 3,011 out of 57,381
    • In biophysics: 76 out of 2,431
  • Year to date:
    • Site-wide: 7,074 out of 57,381
  • Since beginning of last month:
    • Site-wide: 9,955 out of 57,381

Mapping the Conformational Landscape of a Dynamic Enzyme by XFEL and Multitemperature Crystallography

biophysics more details view paper
  • Downloaded 1,406 times
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    • Site-wide: 3,699 out of 57,381
    • In biophysics: 93 out of 2,431
  • Year to date:
    • Site-wide: 44,775 out of 57,381
  • Since beginning of last month:
    • Site-wide: 40,479 out of 57,381

Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta

biochemistry more details view paper
  • Downloaded 1,026 times
  • Download rankings, all-time:
    • Site-wide: 6,195 out of 57,381
    • In biochemistry: 110 out of 1,641
  • Year to date:
    • Site-wide: 41,210 out of 57,381
  • Since beginning of last month:
    • Site-wide: 43,877 out of 57,381

qFit-ligand reveals widespread conformational heterogeneity of drug-like molecules in X-ray electron density maps

biophysics more details view paper
  • Downloaded 892 times
  • Download rankings, all-time:
    • Site-wide: 7,728 out of 57,381
    • In biophysics: 221 out of 2,431
  • Year to date:
    • Site-wide: 19,364 out of 57,381
  • Since beginning of last month:
    • Site-wide: 30,994 out of 57,381

Measuring and modeling diffuse scattering in protein X-ray crystallography

biophysics more details view paper
  • Downloaded 805 times
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    • Site-wide: 9,078 out of 57,381
    • In biophysics: 256 out of 2,431
  • Year to date:
    • Site-wide: 43,704 out of 57,381
  • Since beginning of last month:
    • Site-wide: 38,956 out of 57,381

Side-chain-directed model and map validation for 3D Electron Cryomicroscopy

biophysics more details view paper
  • Downloaded 800 times
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    • Site-wide: 9,166 out of 57,381
    • In biophysics: 263 out of 2,431
  • Year to date:
    • Site-wide: 42,440 out of 57,381
  • Since beginning of last month:
    • Site-wide: 34,399 out of 57,381

Temperature-Jump Solution X-ray Scattering Reveals Distinct Motions in a Dynamic Enzyme

biophysics more details view paper
  • Downloaded 724 times
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    • Site-wide: 10,577 out of 57,381
    • In biophysics: 311 out of 2,431
  • Year to date:
    • Site-wide: 5,715 out of 57,381
  • Since beginning of last month:
    • Site-wide: 6,159 out of 57,381

Exposing hidden alternative backbone conformations in X-ray crystallography using qFit

biophysics more details view paper
  • Downloaded 665 times
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    • Site-wide: 11,940 out of 57,381
    • In biophysics: 362 out of 2,431
  • Year to date:
    • Site-wide: 50,565 out of 57,381
  • Since beginning of last month:
    • Site-wide: 23,444 out of 57,381

Predicting X-ray Diffuse Scattering from Translation Libration Screw Structural Ensembles

biophysics more details view paper
  • Downloaded 654 times
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    • Site-wide: 12,272 out of 57,381
    • In biophysics: 372 out of 2,431
  • Year to date:
    • Site-wide: 52,529 out of 57,381
  • Since beginning of last month:
    • Site-wide: 37,861 out of 57,381

Co-occurring alterations in the RAS-MAPK pathway limit response to MET inhibitor treatment in MET exon 14 skipping mutation positive lung cancer

cancer biology more details view paper
  • Downloaded 637 times
  • Download rankings, all-time:
    • Site-wide: 12,671 out of 57,381
    • In cancer biology: 363 out of 1,855
  • Year to date:
    • Site-wide: 5,747 out of 57,381
  • Since beginning of last month:
    • Site-wide: 7,289 out of 57,381

New routes for PTP1B allosteric inhibition by multitemperature crystallography, fragment screening and covalent tethering

biophysics more details view paper
  • Downloaded 587 times
  • Download rankings, all-time:
    • Site-wide: 14,165 out of 57,381
    • In biophysics: 439 out of 2,431
  • Year to date:
    • Site-wide: 38,073 out of 57,381
  • Since beginning of last month:
    • Site-wide: 48,979 out of 57,381

Computational design of a modular protein sense/response system

biophysics more details view paper
  • Downloaded 570 times
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    • Site-wide: 14,750 out of 57,381
    • In biophysics: 470 out of 2,431
  • Year to date:
    • Site-wide: 2,817 out of 57,381
  • Since beginning of last month:
    • Site-wide: 4,512 out of 57,381

Flexibility and design: conformational heterogeneity along the evolutionary trajectory of a redesigned ubiquitin

biophysics more details view paper
  • Downloaded 562 times
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    • Site-wide: 15,051 out of 57,381
    • In biophysics: 481 out of 2,431
  • Year to date:
    • Site-wide: 48,929 out of 57,381
  • Since beginning of last month:
    • Site-wide: 48,065 out of 57,381

Rescue of Conformational Dynamics in Enzyme Catalysis by Directed Evolution

biophysics more details view paper
  • Downloaded 500 times
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    • Site-wide: 17,449 out of 57,381
    • In biophysics: 585 out of 2,431
  • Year to date:
    • Site-wide: 43,139 out of 57,381
  • Since beginning of last month:
    • Site-wide: 37,854 out of 57,381

Cysteine modification can gate non-equilibrium conformational dynamics during enzyme catalysis

biochemistry more details view paper
  • Downloaded 497 times
  • Download rankings, all-time:
    • Site-wide: 17,608 out of 57,381
    • In biochemistry: 387 out of 1,641
  • Year to date:
    • Site-wide: 3,578 out of 57,381
  • Since beginning of last month:
    • Site-wide: 4,179 out of 57,381

Extending Chemical Perturbations Of The Ubiquitin Fitness Landscape In A Classroom Setting

bioinformatics more details view paper
  • Downloaded 451 times
  • Download rankings, all-time:
    • Site-wide: 19,714 out of 57,381
    • In bioinformatics: 2,905 out of 5,858
  • Year to date:
    • Site-wide: 46,046 out of 57,381
  • Since beginning of last month:
    • Site-wide: 49,645 out of 57,381

Bringing Diffuse X-ray Scattering Into Focus

biophysics more details view paper
  • Downloaded 448 times
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    • Site-wide: 19,850 out of 57,381
    • In biophysics: 701 out of 2,431
  • Year to date:
    • Site-wide: 46,492 out of 57,381
  • Since beginning of last month:
    • Site-wide: 24,372 out of 57,381

Model selection for biological crystallography

biophysics more details view paper
  • Downloaded 353 times
  • Download rankings, all-time:
    • Site-wide: 25,555 out of 57,381
    • In biophysics: 963 out of 2,431
  • Year to date:
    • Site-wide: 26,409 out of 57,381
  • Since beginning of last month:
    • Site-wide: 34,298 out of 57,381

High-resolution cryo-electron microscopy structure of the Escherichia coli 50S subunit and validation of nucleotide modifications

biochemistry more details view paper
  • Downloaded 347 times
  • Download rankings, all-time:
    • Site-wide: 26,014 out of 57,381
    • In biochemistry: 615 out of 1,641
  • Year to date:
    • Site-wide: 6,434 out of 57,381
  • Since beginning of last month:
    • Site-wide: 431 out of 57,381

From deep TLS validation to ensembles of atomic models built from elemental motions

biophysics more details view paper
  • Downloaded 319 times
  • Download rankings, all-time:
    • Site-wide: 28,207 out of 57,381
    • In biophysics: 1,076 out of 2,431
  • Year to date:
    • Site-wide: 51,789 out of 57,381
  • Since beginning of last month:
    • Site-wide: 49,061 out of 57,381

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