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Author: Xiuqing Zhang

  • Most recently observed institution: 1 College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China. 3 BGI-Shenzhen, Shenzhen 518083, China.

Rankings

  • All-time downloads: 23,716 (rank: 12,570 )
  • Categories:
    • bioinformatics: 4,782 (rank: 3,701 (tie) )
    • cancer biology: 1,339 (rank: 10,115 (tie) )
    • clinical trials: 1,545 (rank: 379 (tie) )
    • genetics: 870 (rank: 22,657 (tie) )
    • genomics: 5,041 (rank: 6,266 )
    • immunology: 6,325 (rank: 2,577 )
    • molecular biology: 856 (rank: 11,608 (tie) )
    • pathology: 341 (rank: 6,789 (tie) )
    • systems biology: 1,446 (rank: 4,179 (tie) )

Downloads per author, site-wide

Preprints

A Single-Cell Immune Atlas of Triple Negative Breast Cancer Reveals Novel Immune Cell Subsets

immunology more details view paper
  • Downloaded 3,072 times
  • Download rankings, all-time:
    • Site-wide: 6,873
    • In immunology: 273
  • Year to date:
    • Site-wide: 14,514
  • Since beginning of last month:
    • Site-wide: 11,810

The common neoantigens in colorectal cancer are predicted and validated to be presented or immunogenic

immunology more details view paper
  • Downloaded 1,976 times
  • Download rankings, all-time:
    • Site-wide: 13,236
    • In immunology: 528
  • Year to date:
    • Site-wide: 7,692
  • Since beginning of last month:
    • Site-wide: 7,020

Fecal microbiota transplantation brings about bacterial strain displacement in patients with inflammatory bowel diseases

clinical trials more details view paper
  • Downloaded 1,603 times
  • Download rankings, all-time:
    • Site-wide: 18,261
    • In clinical trials: 35
  • Year to date:
    • Site-wide: 48,296
  • Since beginning of last month:
    • Site-wide: 34,523

Massively parallel quantification of CRISPR editing in cells by TRAP-seq enables better design of Cas9, ABE, CBE gRNAs of high efficiency and accuracy

systems biology more details view paper
  • Downloaded 1,484 times
  • Download rankings, all-time:
    • Site-wide: 20,643
    • In systems biology: 357
  • Year to date:
    • Site-wide: 43,449
  • Since beginning of last month:
    • Site-wide: 58,162

Circularization of genes and chromosome by CRISPR in human cells

genomics more details view paper
  • Downloaded 1,457 times
  • Download rankings, all-time:
    • Site-wide: 21,237
    • In genomics: 1,828
  • Year to date:
    • Site-wide: 141,341
  • Since beginning of last month:
    • Site-wide: 107,187

An ATAC-seq atlas of chromatin accessibility in mouse tissues

genomics more details view paper
  • Downloaded 1,410 times
  • Download rankings, all-time:
    • Site-wide: 22,398
    • In genomics: 1,906
  • Year to date:
    • Site-wide: 187,068
  • Since beginning of last month:
    • Site-wide: 167,261

LFMD: detecting low-frequency mutations in high-depth genome sequencing data without molecular tags

bioinformatics more details view paper
  • Downloaded 1,408 times
  • Download rankings, all-time:
    • Site-wide: 22,436
    • In bioinformatics: 2,436
  • Year to date:
    • Site-wide: 49,748
  • Since beginning of last month:
    • Site-wide: 60,393

CRISPR-GNL: an improved model for predicting CRISPR activity by machine learning and featurization

bioinformatics more details view paper
  • Downloaded 1,223 times
  • Download rankings, all-time:
    • Site-wide: 28,039
    • In bioinformatics: 2,974
  • Year to date:
    • Site-wide: 84,257
  • Since beginning of last month:
    • Site-wide: 125,742

The co-stimulation of anti-CD28 and IL-2 enhances the sensitivity of ELISPOT assays for detection of neoantigen-specific T cells in PBMC

immunology more details view paper
  • Downloaded 1,038 times
  • Download rankings, all-time:
    • Site-wide: 36,159
    • In immunology: 1,329
  • Year to date:
    • Site-wide: 40,127
  • Since beginning of last month:
    • Site-wide: 14,960

The landscape of somatic mutation in sporadic Chinese colorectal cancer

genomics more details view paper
  • Downloaded 903 times
  • Download rankings, all-time:
    • Site-wide: 44,730
    • In genomics: 3,380
  • Year to date:
    • Site-wide: 136,943
  • Since beginning of last month:
    • Site-wide: 69,162

Genome profiles of lymphovascular breast cancer cells reveal multiple clonally differentiated outcomes with multi-regional LCM and G&T-seq

cancer biology more details view paper
  • Downloaded 808 times
  • Download rankings, all-time:
    • Site-wide: 53,006
    • In cancer biology: 1,494
  • Year to date:
    • Site-wide: 104,789
  • Since beginning of last month:
    • Site-wide: 47,457

Evaluation of Commercially Available Exosomal Isolation Kits from Human Plasma

bioinformatics more details view paper
  • Downloaded 802 times
  • Download rankings, all-time:
    • Site-wide: 53,617
    • In bioinformatics: 5,326
  • Year to date:
    • Site-wide: 69,812
  • Since beginning of last month:
    • Site-wide: 58,271

Cell free extrachromosomal circular DNA is common in human urine

genomics more details view paper
  • Downloaded 694 times
  • Download rankings, all-time:
    • Site-wide: 66,162
    • In genomics: 4,815
  • Year to date:
    • Site-wide: 14,205
  • Since beginning of last month:
    • Site-wide: 45,832

Comparison of double-stranded and single-stranded cfDNA library construction methods for targeted genome and methylation sequencing

molecular biology more details view paper
  • Downloaded 652 times
  • Download rankings, all-time:
    • Site-wide: 72,097
    • In molecular biology: 2,773
  • Year to date:
    • Site-wide: 6,863
  • Since beginning of last month:
    • Site-wide: 8,718

CNV-PG: a machine-learning framework for accurate copy number variation predicting and genotyping

bioinformatics more details view paper
  • Downloaded 629 times
  • Download rankings, all-time:
    • Site-wide: 75,519
    • In bioinformatics: 6,736
  • Year to date:
    • Site-wide: 146,083
  • Since beginning of last month:
    • Site-wide: 202,262

Molecular profiles and mutation burden analysis in Chinese patients with gastric carcinoma

cancer biology more details view paper
  • Downloaded 578 times
  • Download rankings, all-time:
    • Site-wide: 84,133
    • In cancer biology: 2,385
  • Year to date:
    • Site-wide: 163,193
  • Since beginning of last month:
    • Site-wide: 148,627

D-GPM: a deep learning method for gene promoter methylation inference

bioinformatics more details view paper
  • Downloaded 528 times
  • Download rankings, all-time:
    • Site-wide: 93,877
    • In bioinformatics: 8,134
  • Year to date:
    • Site-wide: 169,076
  • Since beginning of last month:
    • Site-wide: 93,777

Gene pathogenicity prediction of Mendelian diseases via the Random Forest algorithm

genetics more details view paper
  • Downloaded 466 times
  • Download rankings, all-time:
    • Site-wide: 107,838
    • In genetics: 4,160
  • Year to date:
    • Site-wide: 120,479
  • Since beginning of last month:
    • Site-wide: 53,597

New genetic variants associated with major adverse cardiovascular events in patients with acute coronary syndromes and treated with clopidogrel and aspirin

genetics more details view paper
  • Downloaded 458 times
  • Download rankings, all-time:
    • Site-wide: 109,845
    • In genetics: 4,142
  • Year to date:
    • Site-wide: 162,824
  • Since beginning of last month:
    • Site-wide: 127,866

A Comprehensive Survey of Genomic Mutations in Breast Cancer Reveals Recurrent Neoantigens as Potential Therapeutic Targets

genomics more details view paper
  • Downloaded 405 times
  • Download rankings, all-time:
    • Site-wide: 123,343
    • In genomics: 6,739
  • Year to date:
    • Site-wide: 184,766
  • Since beginning of last month:
    • Site-wide: 178,980

Impact of blood storage conditions on the transcript profile of plasma cell-free RNA

molecular biology more details view paper
  • Downloaded 398 times
  • Download rankings, all-time:
    • Site-wide: 125,329
    • In molecular biology: 3,687
  • Year to date:
    • Site-wide: 82,879
  • Since beginning of last month:
    • Site-wide: 62,885

Germline-encoded TCR-MHC contacts promote TCR V gene bias in umbilical cord blood T cell repertoire

immunology more details view paper
  • Downloaded 396 times
  • Download rankings, all-time:
    • Site-wide: 125,935
    • In immunology: 3,987
  • Year to date:
    • Site-wide: 107,246
  • Since beginning of last month:
    • Site-wide: 60,421

Transcriptome analyses of β-thalassemia -28 (A>G) mutation using isogenic cell models generated by CRISPR/Cas9 and asymmetric single-stranded oligodeoxynucleotides (assODN)

pathology more details view paper
  • Downloaded 357 times
  • Download rankings, all-time:
    • Site-wide: 137,220
    • In pathology: 731
  • Year to date:
    • Site-wide: 164,543
  • Since beginning of last month:
    • Site-wide: 138,443

Molecular subtyping and prognostic assessment based on tumor mutation burden in patients with lung adenocarcinomas

genomics more details view paper
  • Downloaded 347 times
  • Download rankings, all-time:
    • Site-wide: 140,193
    • In genomics: 7,314
  • Year to date:
    • Site-wide: 198,315
  • Since beginning of last month:
    • Site-wide: 129,549

BDdb: a comprehensive platform for exploration and utilization of birth defect multi-omics data

bioinformatics more details view paper
  • Downloaded 258 times
  • Download rankings, all-time:
    • Site-wide: 166,425
    • In bioinformatics: 12,523
  • Year to date:
    • Site-wide: 145,546
  • Since beginning of last month:
    • Site-wide: 142,221

Responding kinetic of B-cell receptor repertoire to the Toll-like receptor 7/8 stimulation in non-human primates

immunology more details view paper
  • Downloaded 222 times
  • Download rankings, all-time:
    • Site-wide: 176,060
    • In immunology: 5,434
  • Year to date:
    • Site-wide: 111,990
  • Since beginning of last month:
    • Site-wide: 199,990

IntroSpect: motif-guided immunopeptidome database building tool to improve the sensitivity of HLA binding peptide identification

bioinformatics more details view paper
  • Downloaded 144 times
  • Download rankings, all-time:
    • Site-wide: 193,349
    • In bioinformatics: 13,919
  • Year to date:
    • Site-wide: 99,285
  • Since beginning of last month:
    • Site-wide: 84,881

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