Author: So Nakagawa
- ORCiD: http://orcid.org/0000-0003-1760-3839
- Most recently observed institution: Department of Molecular Life Science, Tokai University School of Medicine
Rankings
- All-time downloads: 129,933 (rank: 1,264 )
- Categories:
- biochemistry: 225 (rank: 27,436 (tie) )
- bioinformatics: 3,089 (rank: 5,734 (tie) )
- genomics: 4,632 (rank: 6,352 (tie) )
- microbiology: 117,722 (rank: 121 )
- molecular biology: 1,010 (rank: 8,192 (tie) )
Downloads per author, site-wide
Preprints
SARS-CoV-2 Lambda variant exhibits higher infectivity and immune resistance
microbiology more details view paper- Downloaded 52,306 times
- Download rankings, all-time:
- Site-wide: 176
- In microbiology: 14
- Year to date:
- Site-wide: 2,023
- Since beginning of last month:
- Site-wide: 8,282
Ineffective neutralization of the SARS-CoV-2 Mu variant by convalescent and vaccine sera
microbiology more details view paper- Downloaded 31,423 times
- Download rankings, all-time:
- Site-wide: 317
- In microbiology: 30
- Year to date:
- Site-wide: 5,691
- Since beginning of last month:
- Site-wide: 19,415
SARS-CoV-2 spike P681R mutation, a hallmark of the Delta variant, enhances viral fusogenicity and pathogenicity
microbiology more details view paper- Downloaded 12,229 times
- Download rankings, all-time:
- Site-wide: 991
- In microbiology: 95
- Year to date:
- Site-wide: 3,576
- Since beginning of last month:
- Site-wide: 14,167
SARS-CoV-2 ORF3b is a potent interferon antagonist whose activity is further increased by a naturally occurring elongation variant
microbiology more details view paper- Downloaded 9,438 times
- Download rankings, all-time:
- Site-wide: 1,356
- In microbiology: 124
- Year to date:
- Site-wide: 51,661
- Since beginning of last month:
- Site-wide: 68,270
An emerging SARS-CoV-2 mutant evading cellular immunity and increasing viral infectivity
microbiology more details view paper- Downloaded 7,376 times
- Download rankings, all-time:
- Site-wide: 1,861
- In microbiology: 158
- Year to date:
- Site-wide: 12,734
- Since beginning of last month:
- Site-wide: 17,091
A portable system for metagenomic analyses using nanopore-based sequencer and laptop computers can realize rapid on-site determination of bacterial compositions
genomics more details view paper- Downloaded 2,862 times
- Download rankings, all-time:
- Site-wide: 6,984
- In genomics: 628
- Year to date:
- Site-wide: 114,207
- Since beginning of last month:
- Site-wide: 161,008
Rapid bacterial identification by direct PCR amplification of 16S rRNA genes using the MinION™ nanopore sequencer
microbiology more details view paper- Downloaded 2,326 times
- Download rankings, all-time:
- Site-wide: 9,455
- In microbiology: 537
- Year to date:
- Site-wide: 76,763
- Since beginning of last month:
- Site-wide: 72,523
Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution
microbiology more details view paper- Downloaded 1,813 times
- Download rankings, all-time:
- Site-wide: 13,700
- In microbiology: 831
- Year to date:
- Site-wide: 14,463
- Since beginning of last month:
- Site-wide: 13,203
Sequence Compression Benchmark (SCB) database — a comprehensive evaluation of reference-free compressors for FASTA-formatted sequences
bioinformatics more details view paper- Downloaded 1,481 times
- Download rankings, all-time:
- Site-wide: 18,613
- In bioinformatics: 2,008
- Year to date:
- Site-wide: 55,493
- Since beginning of last month:
- Site-wide: 67,135
Genomic diversity of SARS-CoV-2 can be accelerated by a mutation in the nsp14 gene
microbiology more details view paper- Downloaded 1,359 times
- Download rankings, all-time:
- Site-wide: 21,284
- In microbiology: 1,329
- Year to date:
- Site-wide: 18,941
- Since beginning of last month:
- Site-wide: 8,706
Nanopore-based single molecule sequencing of the D4Z4 array responsible for facioscapulohumeral muscular dystrophy
bioinformatics more details view paper- Downloaded 1,173 times
- Download rankings, all-time:
- Site-wide: 26,726
- In bioinformatics: 2,726
- Year to date:
- Site-wide: 153,820
- Since beginning of last month:
- Site-wide: 173,525
SARS-CoV-2 spike S375F mutation characterizes the Omicron BA.1 variant
microbiology more details view paper- Downloaded 747 times
- Download rankings, all-time:
- Site-wide: 52,215
- In microbiology: None
- Year to date:
- Site-wide: 2,715
- Since beginning of last month:
- Site-wide: 11,293
Comprehensive genomic analysis reveals dynamic evolution of endogenous retroviruses that code for retroviral-like protein domains
genomics more details view paper- Downloaded 727 times
- Download rankings, all-time:
- Site-wide: 54,308
- In genomics: 3,789
- Year to date:
- Site-wide: 139,103
- Since beginning of last month:
- Site-wide: 113,800
Alopecia areata susceptibility variant identified by MHC risk haplotype sequencing reproduces symptomatic patched hair loss in mice
genomics more details view paper- Downloaded 647 times
- Download rankings, all-time:
- Site-wide: 63,745
- In genomics: 4,324
- Year to date:
- Site-wide: 114,068
- Since beginning of last month:
- Site-wide: 104,119
MinION™, a portable long-read sequencer, enables rapid vaginal microbiota analysis in a clinical setting
microbiology more details view paper- Downloaded 623 times
- Download rankings, all-time:
- Site-wide: 67,018
- In microbiology: 5,001
- Year to date:
- Site-wide: 25,848
- Since beginning of last month:
- Site-wide: 17,178
Nucleotide Archival Format (NAF) enables efficient lossless reference-free compression of DNA sequences
bioinformatics more details view paper- Downloaded 525 times
- Download rankings, all-time:
- Site-wide: 82,788
- In bioinformatics: 7,136
- Year to date:
- Site-wide: 128,479
- Since beginning of last month:
- Site-wide: 86,292
NeoRdRp: A comprehensive dataset for identifying RNA-dependent RNA polymerase of various RNA viruses from metatranscriptomic data
microbiology more details view paper- Downloaded 391 times
- Download rankings, all-time:
- Site-wide: 112,671
- In microbiology: 10,257
- Year to date:
- Site-wide: 7,230
- Since beginning of last month:
- Site-wide: 27,150
Nanopore direct RNA sequencing detects DUX4-activated repeats and isoforms in human muscle cells
genomics more details view paper- Downloaded 384 times
- Download rankings, all-time:
- Site-wide: 114,370
- In genomics: 6,315
- Year to date:
- Site-wide: 151,036
- Since beginning of last month:
- Site-wide: 167,796
Plasmid analysis of NDM metallo-β-lactamase-producing Enterobacterales isolated in Vietnam
microbiology more details view paper- Downloaded 359 times
- Download rankings, all-time:
- Site-wide: 121,340
- In microbiology: 8,229
- Year to date:
- Site-wide: 106,614
- Since beginning of last month:
- Site-wide: 76,624
Efficient differentiation and polarization of primary cultured neurons on poly(lactic acid) scaffolds with microgrooved structures
molecular biology more details view paper- Downloaded 318 times
- Download rankings, all-time:
- Site-wide: 132,934
- In molecular biology: 3,727
- Year to date:
- Site-wide: 153,831
- Since beginning of last month:
- Site-wide: 131,667
An ancient retroviral RNA element hidden in mammalian genomes and its involvement in co-opted retroviral gene regulation
molecular biology more details view paper- Downloaded 282 times
- Download rankings, all-time:
- Site-wide: 143,804
- In molecular biology: 4,094
- Year to date:
- Site-wide: 105,254
- Since beginning of last month:
- Site-wide: 73,687
Uhrf1 governs the proliferation and differentiation of muscle satellite cells
molecular biology more details view paper- Downloaded 273 times
- Download rankings, all-time:
- Site-wide: 146,486
- In molecular biology: 4,115
- Year to date:
- Site-wide: 118,356
- Since beginning of last month:
- Site-wide: 123,242
Monotreme-specific conserved proteins derived from retroviral reverse transcriptase
genomics more details view paper- Downloaded 254 times
- Download rankings, all-time:
- Site-wide: 151,903
- In genomics: 8,331
- Year to date:
- Site-wide: 13,896
- Since beginning of last month:
- Site-wide: 53,675
Activity-specificity trade-off gives PI5P4Kβ a nucleotide preference to function as a GTP-sensing kinase.
biochemistry more details view paper- Downloaded 253 times
- Download rankings, all-time:
- Site-wide: 152,436
- In biochemistry: 4,458
- Year to date:
- Site-wide: 104,123
- Since beginning of last month:
- Site-wide: 103,077
Expression of ERV3-1 in Leukocytes of Acute Myelogenous Leukemia Patients
molecular biology more details view paper- Downloaded 217 times
- Download rankings, all-time:
- Site-wide: 162,539
- In molecular biology: 4,570
- Year to date:
- Site-wide: 161,657
- Since beginning of last month:
- Site-wide: 139,188
Rapid profiling of drug-resistant bacteria using DNA-binding dyes and a nanopore-based DNA sequencer
microbiology more details view paper- Downloaded 147 times
- Download rankings, all-time:
- Site-wide: 178,765
- In microbiology: 12,734
- Year to date:
- Site-wide: 171,171
- Since beginning of last month:
- Site-wide: 137,999
PanLingua
News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!