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Author: So Nakagawa

Rankings

  • All-time downloads: 32,474 (rank: 5,411 (tie) )
  • Categories:
    • biochemistry: 155 (rank: 24,181 (tie) )
    • bioinformatics: 2,923 (rank: 5,043 (tie) )
    • genomics: 4,221 (rank: 6,122 (tie) )
    • microbiology: 24,523 (rank: 553 )
    • molecular biology: 652 (rank: 10,337 (tie) )

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Preprints

SARS-CoV-2 ORF3b is a potent interferon antagonist whose activity is further increased by a naturally occurring elongation variant

microbiology more details view paper
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    • Site-wide: 1,021
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An emerging SARS-CoV-2 mutant evading cellular immunity and increasing viral infectivity

microbiology more details view paper
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    • Site-wide: 1,623
    • In microbiology: 136
  • Year to date:
    • Site-wide: 273
  • Since beginning of last month:
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SARS-CoV-2 spike P681R mutation, a hallmark of the Delta variant, enhances viral fusogenicity and pathogenicity

microbiology more details view paper
  • Downloaded 4,166 times
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    • Site-wide: 2,967
    • In microbiology: 212
  • Year to date:
    • Site-wide: 447
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A portable system for metagenomic analyses using nanopore-based sequencer and laptop computers can realize rapid on-site determination of bacterial compositions

genomics more details view paper
  • Downloaded 2,754 times
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    • Site-wide: 5,337
    • In genomics: 556
  • Year to date:
    • Site-wide: 123,214
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    • Site-wide: 108,203

Rapid bacterial identification by direct PCR amplification of 16S rRNA genes using the MinION™ nanopore sequencer

microbiology more details view paper
  • Downloaded 2,122 times
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    • Site-wide: 7,818
    • In microbiology: 459
  • Year to date:
    • Site-wide: 25,791
  • Since beginning of last month:
    • Site-wide: 15,092

Sequence Compression Benchmark (SCB) database — a comprehensive evaluation of reference-free compressors for FASTA-formatted sequences

bioinformatics more details view paper
  • Downloaded 1,336 times
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    • Site-wide: 15,532
    • In bioinformatics: 1,825
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    • Site-wide: 48,633
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    • Site-wide: 31,371

Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution

microbiology more details view paper
  • Downloaded 1,265 times
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    • Site-wide: 16,850
    • In microbiology: 981
  • Year to date:
    • Site-wide: 9,822
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Nanopore-based single molecule sequencing of the D4Z4 array responsible for facioscapulohumeral muscular dystrophy

bioinformatics more details view paper
  • Downloaded 1,121 times
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    • In bioinformatics: 2,342
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Genomic diversity of SARS-CoV-2 can be accelerated by a mutation in the nsp14 gene

microbiology more details view paper
  • Downloaded 765 times
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    • Site-wide: 34,726
    • In microbiology: 2,084
  • Year to date:
    • Site-wide: 7,513
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    • Site-wide: 14,357

Comprehensive genomic analysis reveals dynamic evolution of endogenous retroviruses that code for retroviral-like protein domains

genomics more details view paper
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    • Site-wide: 42,466
    • In genomics: 3,439
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    • Site-wide: 80,978
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    • Site-wide: 92,975

Alopecia areata susceptibility variant identified by MHC risk haplotype sequencing reproduces symptomatic patched hair loss in mice

genomics more details view paper
  • Downloaded 535 times
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    • Site-wide: 55,130
    • In genomics: 4,169
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    • Site-wide: 47,140

Nucleotide Archival Format (NAF) enables efficient lossless reference-free compression of DNA sequences

bioinformatics more details view paper
  • Downloaded 466 times
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    • Site-wide: 64,334
    • In bioinformatics: 6,282
  • Year to date:
    • Site-wide: 116,196
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    • Site-wide: 111,339

MinION™, a portable long-read sequencer, enables rapid vaginal microbiota analysis in a clinical setting

microbiology more details view paper
  • Downloaded 304 times
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    • Site-wide: 94,484
    • In microbiology: 6,722
  • Year to date:
    • Site-wide: 15,462
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Nanopore direct RNA sequencing detects DUX4-activated repeats and isoforms in human muscle cells

genomics more details view paper
  • Downloaded 272 times
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    • Site-wide: 101,838
    • In genomics: 6,098
  • Year to date:
    • Site-wide: 41,426
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Plasmid analysis of NDM metallo-β-lactamase-producing Enterobacterales isolated in Vietnam

microbiology more details view paper
  • Downloaded 248 times
  • Download rankings, all-time:
    • Site-wide: 107,630
    • In microbiology: 7,778
  • Year to date:
    • Site-wide: 86,005
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    • Site-wide: 48,914

Efficient differentiation and polarization of primary cultured neurons on poly(lactic acid) scaffolds with microgrooved structures

molecular biology more details view paper
  • Downloaded 243 times
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    • Site-wide: 108,848
    • In molecular biology: 3,214
  • Year to date:
    • Site-wide: 147,177
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    • Site-wide: 128,806

Activity-specificity trade-off gives PI5P4Kβ a nucleotide preference to function as a GTP-sensing kinase.

biochemistry more details view paper
  • Downloaded 155 times
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    • Site-wide: 129,771
    • In biochemistry: 3,905
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    • Site-wide: 108,194
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    • Site-wide: 88,275

An ancient retroviral RNA element hidden in mammalian genomes and its involvement in co-opted retroviral gene regulation

molecular biology more details view paper
  • Downloaded 155 times
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    • Site-wide: 129,969
    • In molecular biology: 3,855
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    • Site-wide: 36,489
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Expression of ERV3-1 in Leukocytes of Acute Myelogenous Leukemia Patients

molecular biology more details view paper
  • Downloaded 137 times
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    • Site-wide: 133,876
    • In molecular biology: 3,971
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Uhrf1 governs the proliferation and differentiation of muscle satellite cells

molecular biology more details view paper
  • Downloaded 117 times
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    • Site-wide: 137,944
    • In molecular biology: 4,107
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    • Site-wide: 87,717

Rapid profiling of drug-resistant bacteria using DNA-binding dyes and a nanopore-based DNA sequencer

microbiology more details view paper
  • Downloaded 78 times
  • Download rankings, all-time:
    • Site-wide: 144,587
    • In microbiology: 11,142
  • Year to date:
    • Site-wide: 126,149
  • Since beginning of last month:
    • Site-wide: 124,874

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