Author: Liam P. Shaw
- ORCiD: http://orcid.org/0000-0001-7332-0820
- Most recently observed institution: Department of Zoology, University of Oxford
Rankings
- All-time downloads: 28,095 (rank: 6,375 )
- Categories:
- bioinformatics: 11,510 (rank: 672 )
- ecology: 1,328 (rank: 2,961 (tie) )
- evolutionary biology: 268 (rank: 20,722 (tie) )
- genomics: 9,284 (rank: 2,222 )
- microbiology: 5,705 (rank: 2,610 )
Downloads per author, site-wide
Preprints
No evidence for increased transmissibility from recurrent mutations in SARS-CoV-2
genomics more details view paper- Downloaded 8,595 times
- Download rankings, all-time:
- Site-wide: 1,112
- In genomics: 90
- Year to date:
- Site-wide: 4,833
- Since beginning of last month:
- Site-wide: 7,348
Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes
bioinformatics more details view paper- Downloaded 8,458 times
- Download rankings, all-time:
- Site-wide: 1,139
- In bioinformatics: 65
- Year to date:
- Site-wide: 25,295
- Since beginning of last month:
- Site-wide: 27,700
Genomic diversity affects the accuracy of bacterial SNP calling pipelines
bioinformatics more details view paper- Downloaded 2,210 times
- Download rankings, all-time:
- Site-wide: 7,390
- In bioinformatics: 844
- Year to date:
- Site-wide: 25,289
- Since beginning of last month:
- Site-wide: 61,881
Modelling microbiome recovery after antibiotics using a stability landscape framework
microbiology more details view paper- Downloaded 1,508 times
- Download rankings, all-time:
- Site-wide: 12,892
- In microbiology: 754
- Year to date:
- Site-wide: 90,079
- Since beginning of last month:
- Site-wide: 108,746
Discordant bioinformatic predictions of antimicrobial resistance from whole-genome sequencing data of bacterial isolates: An inter-laboratory study
microbiology more details view paper- Downloaded 1,405 times
- Download rankings, all-time:
- Site-wide: 14,407
- In microbiology: 847
- Year to date:
- Site-wide: 75,139
- Since beginning of last month:
- Site-wide: 64,680
The phylogenetic range of bacterial and viral pathogens of vertebrates
ecology more details view paper- Downloaded 1,328 times
- Download rankings, all-time:
- Site-wide: 15,667
- In ecology: 238
- Year to date:
- Site-wide: 37,617
- Since beginning of last month:
- Site-wide: 32,909
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples
microbiology more details view paper- Downloaded 1,314 times
- Download rankings, all-time:
- Site-wide: 15,942
- In microbiology: 928
- Year to date:
- Site-wide: 63,024
- Since beginning of last month:
- Site-wide: 61,815
Niche and local geography shape the pangenome of wastewater- and livestock-associated Enterobacteriaceae
microbiology more details view paper- Downloaded 773 times
- Download rankings, all-time:
- Site-wide: 34,278
- In microbiology: 2,054
- Year to date:
- Site-wide: 35,490
- Since beginning of last month:
- Site-wide: 46,924
Whole genome sequencing Mycobacterium tuberculosis directly from sputum identifies more genetic diversity than sequencing from culture
genomics more details view paper- Downloaded 689 times
- Download rankings, all-time:
- Site-wide: 40,105
- In genomics: 3,292
- Year to date:
- Site-wide: 138,555
- Since beginning of last month:
- Site-wide: 138,312
Flanker: a tool for comparative genomics of gene flanking regions
bioinformatics more details view paper- Downloaded 524 times
- Download rankings, all-time:
- Site-wide: 56,519
- In bioinformatics: 5,677
- Year to date:
- Site-wide: 7,139
- Since beginning of last month:
- Site-wide: 19,405
Children with cystic fibrosis are infected with multiple subpopulations of Mycobacterium abscessus with different antimicrobial resistance profiles
microbiology more details view paper- Downloaded 360 times
- Download rankings, all-time:
- Site-wide: 82,618
- In microbiology: 5,689
- Year to date:
- Site-wide: 122,545
- Since beginning of last month:
- Site-wide: 138,168
Role of the mobilome in the global dissemination of the carbapenem resistance gene blaNDM
microbiology more details view paper- Downloaded 345 times
- Download rankings, all-time:
- Site-wide: 85,554
- In microbiology: 5,952
- Year to date:
- Site-wide: 12,890
- Since beginning of last month:
- Site-wide: 25,076
Genomic network analysis of an environmental and livestock IncF plasmid population
bioinformatics more details view paper- Downloaded 318 times
- Download rankings, all-time:
- Site-wide: 91,290
- In bioinformatics: 8,051
- Year to date:
- Site-wide: 96,310
- Since beginning of last month:
- Site-wide: 125,066
Hospital outbreak of carbapenem-resistant Enterobacteriales associated with an OXA-48 plasmid carried mostly by Escherichia coli ST399
evolutionary biology more details view paper- Downloaded 268 times
- Download rankings, all-time:
- Site-wide: 102,830
- In evolutionary biology: 5,288
- Year to date:
- Site-wide: 83,128
- Since beginning of last month:
- Site-wide: 83,832
PanLingua
News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!