Author: Liam P. Shaw
- ORCiD: http://orcid.org/0000-0001-7332-0820
- Most recently observed institution: Department of Zoology, University of Oxford, Oxford, UK
Rankings
- All-time downloads: 32,830 (rank: 7,681 )
- Categories:
- bioinformatics: 12,230 (rank: 797 )
- ecology: 1,428 (rank: 3,391 (tie) )
- evolutionary biology: 672 (rank: 13,533 (tie) )
- genomics: 11,177 (rank: 2,045 )
- microbiology: 6,216 (rank: 3,138 )
Downloads per author, site-wide
Preprints
No evidence for increased transmissibility from recurrent mutations in SARS-CoV-2
genomics more details view paper- Downloaded 9,153 times
- Download rankings, all-time:
- Site-wide: 1,417
- In genomics: 88
- Year to date:
- Site-wide: 16,491
- Since beginning of last month:
- Site-wide: 22,468
Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes
bioinformatics more details view paper- Downloaded 8,752 times
- Download rankings, all-time:
- Site-wide: 1,512
- In bioinformatics: 75
- Year to date:
- Site-wide: 50,071
- Since beginning of last month:
- Site-wide: 118,954
Genomic diversity affects the accuracy of bacterial SNP calling pipelines
bioinformatics more details view paper- Downloaded 2,423 times
- Download rankings, all-time:
- Site-wide: 8,903
- In bioinformatics: 892
- Year to date:
- Site-wide: 58,762
- Since beginning of last month:
- Site-wide: 66,452
Modelling microbiome recovery after antibiotics using a stability landscape framework
microbiology more details view paper- Downloaded 1,589 times
- Download rankings, all-time:
- Site-wide: 16,728
- In microbiology: 902
- Year to date:
- Site-wide: 107,998
- Since beginning of last month:
- Site-wide: 116,556
Discordant bioinformatic predictions of antimicrobial resistance from whole-genome sequencing data of bacterial isolates: An inter-laboratory study
microbiology more details view paper- Downloaded 1,544 times
- Download rankings, all-time:
- Site-wide: 17,494
- In microbiology: 974
- Year to date:
- Site-wide: 115,679
- Since beginning of last month:
- Site-wide: 170,275
A phylogeny-based metric for estimating changes in transmissibility from recurrent mutations in SARS-CoV-2
genomics more details view paper- Downloaded 1,538 times
- Download rankings, all-time:
- Site-wide: 17,611
- In genomics: 1,670
- Year to date:
- Site-wide: 22,526
- Since beginning of last month:
- Site-wide: 41,371
The phylogenetic range of bacterial and viral pathogens of vertebrates
ecology more details view paper- Downloaded 1,475 times
- Download rankings, all-time:
- Site-wide: 18,737
- In ecology: 254
- Year to date:
- Site-wide: 73,779
- Since beginning of last month:
- Site-wide: 67,659
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples
microbiology more details view paper- Downloaded 1,358 times
- Download rankings, all-time:
- Site-wide: 21,308
- In microbiology: 1,149
- Year to date:
- Site-wide: 177,817
- Since beginning of last month:
- Site-wide: 172,895
Niche and local geography shape the pangenome of wastewater- and livestock-associated Enterobacteriaceae
microbiology more details view paper- Downloaded 873 times
- Download rankings, all-time:
- Site-wide: 41,547
- In microbiology: 2,410
- Year to date:
- Site-wide: 93,292
- Since beginning of last month:
- Site-wide: 98,463
Flanker: a tool for comparative genomics of gene flanking regions
bioinformatics more details view paper- Downloaded 865 times
- Download rankings, all-time:
- Site-wide: 42,160
- In bioinformatics: 4,461
- Year to date:
- Site-wide: 47,996
- Since beginning of last month:
- Site-wide: 32,703
Whole genome sequencing Mycobacterium tuberculosis directly from sputum identifies more genetic diversity than sequencing from culture
genomics more details view paper- Downloaded 753 times
- Download rankings, all-time:
- Site-wide: 51,711
- In genomics: 3,679
- Year to date:
- Site-wide: 137,945
- Since beginning of last month:
- Site-wide: 86,198
Role of the mobilome in the global dissemination of the carbapenem resistance gene blaNDM
microbiology more details view paper- Downloaded 618 times
- Download rankings, all-time:
- Site-wide: 67,719
- In microbiology: 4,092
- Year to date:
- Site-wide: 66,355
- Since beginning of last month:
- Site-wide: 88,650
Pre-existing chromosomal polymorphisms in pathogenic E. coli potentiate the evolution of antibiotic resistance by MCR-1 plasmid acquisition
evolutionary biology more details view paper- Downloaded 424 times
- Download rankings, all-time:
- Site-wide: 104,526
- In evolutionary biology: 6,259
- Year to date:
- Site-wide: 6,389
- Since beginning of last month:
- Site-wide: 43,749
Hospital outbreak of carbapenem-resistant Enterobacteriales associated with an OXA-48 plasmid carried mostly by Escherichia coli ST399
evolutionary biology more details view paper- Downloaded 421 times
- Download rankings, all-time:
- Site-wide: 105,253
- In evolutionary biology: 4,969
- Year to date:
- Site-wide: 79,722
- Since beginning of last month:
- Site-wide: 111,814
Genomic network analysis of an environmental and livestock IncF plasmid population
bioinformatics more details view paper- Downloaded 395 times
- Download rankings, all-time:
- Site-wide: 111,656
- In bioinformatics: 9,018
- Year to date:
- Site-wide: 127,763
- Since beginning of last month:
- Site-wide: 92,304
Children with cystic fibrosis are infected with multiple subpopulations of Mycobacterium abscessus with different antimicrobial resistance profiles
microbiology more details view paper- Downloaded 386 times
- Download rankings, all-time:
- Site-wide: 113,875
- In microbiology: 7,150
- Year to date:
- Site-wide: 189,722
- Since beginning of last month:
- Site-wide: 184,776
Plasmid overlap and evolution between Enterobacterales isolates from bloodstream infections and non-human compartments
genomics more details view paper- Downloaded 263 times
- Download rankings, all-time:
- Site-wide: 149,259
- In genomics: None
- Year to date:
- Site-wide: 13,227
- Since beginning of last month:
- Site-wide: 1,746
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News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
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