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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 63,093 bioRxiv papers from 279,869 authors.

Author: Eran Halperin

  • Most recently observed institution: Bioinformatics Interdepartmental Program

Rankings

  • All-time downloads: 16,396 (rank: 1,740 out of 279,869)
  • Categories:
    • bioinformatics: 6,034 (rank: 779 out of 24,475)
    • genetics: 4,823 (rank: 2,890 (tie) out of 27,860)
    • genomics: 2,062 (rank: 6,599 (tie) out of 32,047)
    • microbiology: 3,477 (rank: 346 out of 28,681)

Downloads per author, site-wide

Preprints

Statistical Considerations in the Design and Analysis of Longitudinal Microbiome Studies

microbiology more details view paper
  • Downloaded 2,153 times
  • Download rankings, all-time:
    • Site-wide: 1,965 out of 63,093
    • In microbiology: 46 out of 5,053
  • Year to date:
    • Site-wide: 681 out of 63,093
  • Since beginning of last month:
    • Site-wide: 1,434 out of 63,093

Recycler: an algorithm for detecting plasmids from de novo assembly graphs

genomics more details view paper
  • Downloaded 2,062 times
  • Download rankings, all-time:
    • Site-wide: 2,117 out of 63,093
    • In genomics: 452 out of 4,333
  • Year to date:
    • Site-wide: 26,574 out of 63,093
  • Since beginning of last month:
    • Site-wide: 25,097 out of 63,093

Modeling the temporal dynamics of the gut microbial community in adults and infants

microbiology more details view paper
  • Downloaded 1,324 times
  • Download rankings, all-time:
    • Site-wide: 4,491 out of 63,093
    • In microbiology: 148 out of 5,053
  • Year to date:
    • Site-wide: 11,773 out of 63,093
  • Since beginning of last month:
    • Site-wide: 28,659 out of 63,093

Cell-type-specific resolution epigenetics without the need for cell sorting or single-cell biology

bioinformatics more details view paper
  • Downloaded 1,151 times
  • Download rankings, all-time:
    • Site-wide: 5,653 out of 63,093
    • In bioinformatics: 1,083 out of 6,276
  • Year to date:
    • Site-wide: 3,929 out of 63,093
  • Since beginning of last month:
    • Site-wide: 9,671 out of 63,093

The genetics of Bene Israel from India reveals both substantial Jewish and Indian ancestry

genetics more details view paper
  • Downloaded 1,075 times
  • Download rankings, all-time:
    • Site-wide: 6,346 out of 63,093
    • In genetics: 516 out of 3,582
  • Year to date:
    • Site-wide: 48,129 out of 63,093
  • Since beginning of last month:
    • Site-wide: 47,791 out of 63,093

Faucet: streaming de novo assembly graph construction

bioinformatics more details view paper
  • Downloaded 995 times
  • Download rankings, all-time:
    • Site-wide: 7,157 out of 63,093
    • In bioinformatics: 1,299 out of 6,276
  • Year to date:
    • Site-wide: 52,676 out of 63,093
  • Since beginning of last month:
    • Site-wide: 44,696 out of 63,093

An Ancestry Based Approach for Detecting Interactions

genetics more details view paper
  • Downloaded 969 times
  • Download rankings, all-time:
    • Site-wide: 7,457 out of 63,093
    • In genetics: 577 out of 3,582
  • Year to date:
    • Site-wide: 46,019 out of 63,093
  • Since beginning of last month:
    • Site-wide: 42,817 out of 63,093

RL-SKAT: An exact and efficient score test for heritability and set tests

genetics more details view paper
  • Downloaded 944 times
  • Download rankings, all-time:
    • Site-wide: 7,776 out of 63,093
    • In genetics: 608 out of 3,582
  • Year to date:
    • Site-wide: 22,666 out of 63,093
  • Since beginning of last month:
    • Site-wide: 24,340 out of 63,093

A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference

bioinformatics more details view paper
  • Downloaded 875 times
  • Download rankings, all-time:
    • Site-wide: 8,795 out of 63,093
    • In bioinformatics: 1,539 out of 6,276
  • Year to date:
    • Site-wide: 46,236 out of 63,093
  • Since beginning of last month:
    • Site-wide: 51,778 out of 63,093

Genome-wide methylation data mirror ancestry information

genetics more details view paper
  • Downloaded 871 times
  • Download rankings, all-time:
    • Site-wide: 8,857 out of 63,093
    • In genetics: 666 out of 3,582
  • Year to date:
    • Site-wide: 54,730 out of 63,093
  • Since beginning of last month:
    • Site-wide: 57,254 out of 63,093

Accurate estimation of cell composition in bulk expression through robust integration of single-cell information

bioinformatics more details view paper
  • Downloaded 636 times
  • Download rankings, all-time:
    • Site-wide: 14,009 out of 63,093
    • In bioinformatics: 2,244 out of 6,276
  • Year to date:
    • Site-wide: 3,318 out of 63,093
  • Since beginning of last month:
    • Site-wide: 2,003 out of 63,093

CRISPys: Optimal sgRNA design for editing multiple members of a gene family using the CRISPR system

bioinformatics more details view paper
  • Downloaded 597 times
  • Download rankings, all-time:
    • Site-wide: 15,325 out of 63,093
    • In bioinformatics: 2,416 out of 6,276
  • Year to date:
    • Site-wide: 21,705 out of 63,093
  • Since beginning of last month:
    • Site-wide: 27,655 out of 63,093

Fast and accurate construction of confidence intervals for heritability

genetics more details view paper
  • Downloaded 505 times
  • Download rankings, all-time:
    • Site-wide: 19,047 out of 63,093
    • In genetics: 1,276 out of 3,582
  • Year to date:
    • Site-wide: 55,466 out of 63,093
  • Since beginning of last month:
    • Site-wide: 50,526 out of 63,093

Optimal design of single-cell RNA sequencing experiments for cell-type-specific eQTL analysis

bioinformatics more details view paper
  • Downloaded 497 times
  • Download rankings, all-time:
    • Site-wide: 19,484 out of 63,093
    • In bioinformatics: 2,889 out of 6,276
  • Year to date:
    • Site-wide: 5,042 out of 63,093
  • Since beginning of last month:
    • Site-wide: 219 out of 63,093

The Effects of Migration and Assortative Mating on Admixture Linkage Disequilibrium

genetics more details view paper
  • Downloaded 459 times
  • Download rankings, all-time:
    • Site-wide: 21,347 out of 63,093
    • In genetics: 1,424 out of 3,582
  • Year to date:
    • Site-wide: 58,640 out of 63,093
  • Since beginning of last month:
    • Site-wide: 61,046 out of 63,093

Preoperative predictions of in-hospital mortality using electronic medical record data

bioinformatics more details view paper
  • Downloaded 437 times
  • Download rankings, all-time:
    • Site-wide: 22,624 out of 63,093
    • In bioinformatics: 3,223 out of 6,276
  • Year to date:
    • Site-wide: 18,026 out of 63,093
  • Since beginning of last month:
    • Site-wide: 20,894 out of 63,093

Distinguishing biological from technical sources of variation by leveraging multiple methylation datasets

bioinformatics more details view paper
  • Downloaded 388 times
  • Download rankings, all-time:
    • Site-wide: 25,747 out of 63,093
    • In bioinformatics: 3,527 out of 6,276
  • Year to date:
    • Site-wide: 7,550 out of 63,093
  • Since beginning of last month:
    • Site-wide: 28,103 out of 63,093

Scalable probabilistic PCA for large-scale genetic variation data

bioinformatics more details view paper
  • Downloaded 340 times
  • Download rankings, all-time:
    • Site-wide: 29,472 out of 63,093
    • In bioinformatics: 3,886 out of 6,276
  • Year to date:
    • Site-wide: 9,448 out of 63,093
  • Since beginning of last month:
    • Site-wide: 10,543 out of 63,093

Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM

bioinformatics more details view paper
  • Downloaded 118 times
  • Download rankings, all-time:
    • Site-wide: 55,190 out of 63,093
    • In bioinformatics: 5,811 out of 6,276
  • Year to date:
    • Site-wide: 35,619 out of 63,093
  • Since beginning of last month:
    • Site-wide: 2,882 out of 63,093

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