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Author: Yun Li

Rankings

  • All-time downloads: 50,319 (rank: 2,344 out of 510,799)
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    • biochemistry: 84 (rank: 20,656 (tie) out of 21,457)
    • bioinformatics: 13,573 (rank: 394 out of 36,842)
    • cell biology: 460 (rank: 16,597 (tie) out of 33,919)
    • developmental biology: 291 (rank: 12,110 (tie) out of 17,402)
    • epidemiology: 3,115 (rank: 2,784 out of 23,897)
    • genetic and genomic medicine: 1,830 (rank: 452 (tie) out of 6,821)
    • genetics: 21,441 (rank: 383 out of 38,674)
    • genomics: 5,664 (rank: 3,470 out of 45,521)
    • microbiology: 1,167 (rank: 9,529 (tie) out of 52,238)
    • neuroscience: 1,730 (rank: 10,688 (tie) out of 73,694)
    • scientific communication and education: 964 (rank: 818 (tie) out of 3,548)

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Preprints

THUNDER: A reference-free deconvolution method to infer cell type proportions from bulk Hi-C data

bioinformatics more details view paper

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HPRep: Quantifying reproducibility in HiChIP and PLAC-seq datasets

genomics more details view paper

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iSMNN: Batch Effect Correction for Single-cell RNA-seq data via Iterative Supervised Mutual Nearest Neighbor Refinement

bioinformatics more details view paper

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Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

genetics more details view paper
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The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

bioinformatics more details view paper
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An epigenetic biomarker of aging for lifespan and healthspan

epidemiology more details view paper
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SAFE-clustering: Single-cell Aggregated (From Ensemble) Clustering for Single-cell RNA-seq Data

bioinformatics more details view paper
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Multi-epitope vaccine design using an immunoinformatics approach for 2019 novel coronavirus (SARS-CoV-2)

bioinformatics more details view paper
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Trans-ethnic and ancestry-specific blood-cell genetics in 746,667 individuals from 5 global populations

genetics more details view paper
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Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits

genetics more details view paper
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The Polygenic and Monogenic Basis of Blood Traits and Diseases

genetic and genomic medicine more details view paper
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    • In genetic and genomic medicine: 16 out of 488
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Large-scale GWAS reveals genetic architecture of brain white matter microstructure and genetic overlap with cognitive and mental health traits (n=17,706)

genetics more details view paper
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Common DNA sequence variation influences 3-dimensional conformation of the human genome

genomics more details view paper
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3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

genomics more details view paper
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SCDC: Bulk Gene Expression Deconvolution by Multiple Single-Cell RNA Sequencing References

bioinformatics more details view paper
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    • In bioinformatics: 1,580 out of 9,583
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The intestinal microbiota programs diurnal rhythms in host metabolism through histone deacetylase 3

microbiology more details view paper
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    • In microbiology: 747 out of 9,349
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MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

bioinformatics more details view paper
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SMNN: Batch Effect Correction for Single-cell RNA-seq data via Supervised Mutual Nearest Neighbor Detection

bioinformatics more details view paper
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Robust Hi-C chromatin loop maps in human neurogenesis and brain tissues at high-resolution

genomics more details view paper
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A Possible Role Of Microglia In Zika Virus Infection Of The Fetal Human Brain

neuroscience more details view paper
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The Big Five, Self-efficacy, and Self-control in Boxers

scientific communication and education more details view paper
  • Downloaded 964 times
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    • In scientific communication and education: 149 out of 696
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MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies

genetics more details view paper
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GWAS of 19,629 individuals identifies novel genetic variants for regional brain volumes and refines their genetic co-architecture with cognitive and mental health traits

genetics more details view paper
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GWAS of epigenetic ageing rates in blood reveals a critical role for TERT

genetics more details view paper
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Heritability of regional brain volumes in large-scale neuroimaging and genetic studies

genetics more details view paper
  • Downloaded 787 times
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Neuronal and glial 3D chromatin architecture illustrates cellular etiology of brain disorders

neuroscience more details view paper
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Common genetic variation influencing human white matter microstructure

genetics more details view paper
  • Downloaded 732 times
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HUGIn: Hi-C Unifying Genomic Interrogator

genetics more details view paper
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Transcriptome-wide association analysis of 211 neuroimaging traits identifies new genes for brain structures and yields insights into the gene-level pleiotropy with other complex traits

genetics more details view paper
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Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations

genomics more details view paper
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SAME-clustering: Single-cell Aggregated Clustering via Mixture Model Ensemble

bioinformatics more details view paper
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    • Site-wide: 62,040 out of 118,417

Multi-SNP Mediation Intersection-Union Test

genetics more details view paper
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MRLocus: identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity

bioinformatics more details view paper
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    • Site-wide: 11,539 out of 118,417

TWO-SIGMA: a novel TWO-component SInGle cell Model-based Association method for single-cell RNA-seq data

genomics more details view paper
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Association between ApoE polymorphism and type 2 diabetes: A meta-analysis of 59 studies

genetics more details view paper
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Overarching control of autophagy and DNA damage response by CHD6 revealed by modeling a rare human pathology

cell biology more details view paper
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FIREcaller: Detecting Frequently Interacting Regions from Hi-C Data

bioinformatics more details view paper
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Methylome-Wide Association Study Of Central Adiposity Implicates Genes Involved In Immune And Endocrine Systems

genomics more details view paper
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Generation of Cynomolgus Monkeys (Macaca fascicularis) Embryos with ICSI Based on the MII-Stage Oocytes Acquired by Personalized Superovulation Protocol

developmental biology more details view paper
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Integrative methylome and transcriptome analysis of Japanese flounder (Paralichthys olivaceus) skeletal muscle during development

epidemiology more details view paper
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Generalized Multi-SNP Mediation Intersection-Union Test

genetics more details view paper
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CUE: CpG impUtation Ensemble for DNA Methylation Levels Across the Human Methylation450 (HM450) and EPIC (HM850) BeadChip Platforms

bioinformatics more details view paper
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Characterizing sensitivity and coverage of clinical WGS as a diagnostic test for genetic disorders

genomics more details view paper
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HiC-ACT: Improved Detection of Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test

bioinformatics more details view paper
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    • Site-wide: 11,191 out of 118,417

Genome engineering of Nannochloropsis with large deletions for constructing microalgal minigenomes

biochemistry more details view paper
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    • Site-wide: 14,121 out of 118,417

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