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Author: Yun Li

Rankings

  • All-time downloads: 66,682 (rank: 2,681 )
  • Categories:
    • biochemistry: 198 (rank: 25,093 (tie) )
    • bioinformatics: 17,337 (rank: 392 )
    • cell biology: 642 (rank: 18,066 (tie) )
    • developmental biology: 423 (rank: 13,320 (tie) )
    • epidemiology: 3,385 (rank: 4,300 (tie) )
    • genetic and genomic medicine: 2,685 (rank: 1,401 )
    • genetics: 26,945 (rank: 279 )
    • genomics: 8,678 (rank: 2,674 )
    • health policy: 257 (rank: 1,579 (tie) )
    • hematology: 769 (rank: 498 (tie) )
    • microbiology: 1,291 (rank: 13,513 (tie) )
    • neuroscience: 2,172 (rank: 12,095 (tie) )
    • otolaryngology: 394 (rank: 447 (tie) )
    • pharmacology and therapeutics: 193 (rank: 1,081 (tie) )
    • scientific communication and education: 1,313 (rank: 723 (tie) )

Downloads per author, site-wide

Preprints

pVHL regulates protein stability of TCF/LEF transcription factor family via ubiquitin-independent proteasomal degradation

cell biology more details view paper

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Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

genetics more details view paper
  • Downloaded 9,502 times
  • Download rankings, all-time:
    • Site-wide: 1,110
    • In genetics: 26
  • Year to date:
    • Site-wide: 45,116
  • Since beginning of last month:
    • Site-wide: 37,012

Multi-epitope vaccine design using an immunoinformatics approach for 2019 novel coronavirus (SARS-CoV-2)

bioinformatics more details view paper
  • Downloaded 3,110 times
  • Download rankings, all-time:
    • Site-wide: 4,948
    • In bioinformatics: 469
  • Year to date:
    • Site-wide: 16,704
  • Since beginning of last month:
    • Site-wide: 63,633

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

bioinformatics more details view paper
  • Downloaded 3,038 times
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    • Site-wide: 5,124
    • In bioinformatics: 491
  • Year to date:
    • Site-wide: 60,932
  • Since beginning of last month:
    • Site-wide: 43,617

An epigenetic biomarker of aging for lifespan and healthspan

epidemiology more details view paper
  • Downloaded 3,036 times
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    • Site-wide: 5,129
    • In epidemiology: 488
  • Year to date:
    • Site-wide: 50,008
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    • Site-wide: 91,058

Trans-ethnic and ancestry-specific blood-cell genetics in 746,667 individuals from 5 global populations

genetics more details view paper
  • Downloaded 2,977 times
  • Download rankings, all-time:
    • Site-wide: 5,281
    • In genetics: 213
  • Year to date:
    • Site-wide: 4,924
  • Since beginning of last month:
    • Site-wide: 21,462

SAFE-clustering: Single-cell Aggregated (From Ensemble) Clustering for Single-cell RNA-seq Data

bioinformatics more details view paper
  • Downloaded 2,949 times
  • Download rankings, all-time:
    • Site-wide: 5,345
    • In bioinformatics: 517
  • Year to date:
    • Site-wide: 47,270
  • Since beginning of last month:
    • Site-wide: 43,803

Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits

genetics more details view paper
  • Downloaded 2,550 times
  • Download rankings, all-time:
    • Site-wide: 6,621
    • In genetics: 274
  • Year to date:
    • Site-wide: 11,472
  • Since beginning of last month:
    • Site-wide: 21,378

The Polygenic and Monogenic Basis of Blood Traits and Diseases

genetic and genomic medicine more details view paper
  • Downloaded 2,130 times
  • Download rankings, all-time:
    • Site-wide: 8,596
    • In genetic and genomic medicine: 38
  • Year to date:
    • Site-wide: 35,715
  • Since beginning of last month:
    • Site-wide: 44,302

3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

genomics more details view paper
  • Downloaded 1,952 times
  • Download rankings, all-time:
    • Site-wide: 9,731
    • In genomics: 973
  • Year to date:
    • Site-wide: 14,295
  • Since beginning of last month:
    • Site-wide: 20,812

Large-scale GWAS reveals genetic architecture of brain white matter microstructure and genetic overlap with cognitive and mental health traits (n=17,706)

genetics more details view paper
  • Downloaded 1,769 times
  • Download rankings, all-time:
    • Site-wide: 11,297
    • In genetics: 482
  • Year to date:
    • Site-wide: 68,482
  • Since beginning of last month:
    • Site-wide: 56,755

Common genetic variation influencing human white matter microstructure

genetics more details view paper
  • Downloaded 1,608 times
  • Download rankings, all-time:
    • Site-wide: 12,995
    • In genetics: 572
  • Year to date:
    • Site-wide: 5,880
  • Since beginning of last month:
    • Site-wide: 24,907

Common DNA sequence variation influences 3-dimensional conformation of the human genome

genomics more details view paper
  • Downloaded 1,513 times
  • Download rankings, all-time:
    • Site-wide: 14,215
    • In genomics: 1,420
  • Year to date:
    • Site-wide: 142,999
  • Since beginning of last month:
    • Site-wide: 126,366

Robust Hi-C chromatin loop maps in human neurogenesis and brain tissues at high-resolution

genomics more details view paper
  • Downloaded 1,495 times
  • Download rankings, all-time:
    • Site-wide: 14,494
    • In genomics: 1,441
  • Year to date:
    • Site-wide: 19,588
  • Since beginning of last month:
    • Site-wide: 22,195

SCDC: Bulk Gene Expression Deconvolution by Multiple Single-Cell RNA Sequencing References

bioinformatics more details view paper
  • Downloaded 1,439 times
  • Download rankings, all-time:
    • Site-wide: 15,404
    • In bioinformatics: 1,750
  • Year to date:
    • Site-wide: 52,925
  • Since beginning of last month:
    • Site-wide: 53,292

SMNN: Batch Effect Correction for Single-cell RNA-seq data via Supervised Mutual Nearest Neighbor Detection

bioinformatics more details view paper
  • Downloaded 1,361 times
  • Download rankings, all-time:
    • Site-wide: 16,752
    • In bioinformatics: 1,911
  • Year to date:
    • Site-wide: 42,716
  • Since beginning of last month:
    • Site-wide: 39,077

The Big Five, Self-efficacy, and Self-control in Boxers

scientific communication and education more details view paper
  • Downloaded 1,313 times
  • Download rankings, all-time:
    • Site-wide: 17,684
    • In scientific communication and education: 136
  • Year to date:
    • Site-wide: 26,628
  • Since beginning of last month:
    • Site-wide: 29,139

The intestinal microbiota programs diurnal rhythms in host metabolism through histone deacetylase 3

microbiology more details view paper
  • Downloaded 1,291 times
  • Download rankings, all-time:
    • Site-wide: 18,098
    • In microbiology: 1,052
  • Year to date:
    • Site-wide: 85,171
  • Since beginning of last month:
    • Site-wide: 57,491

MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

bioinformatics more details view paper
  • Downloaded 1,208 times
  • Download rankings, all-time:
    • Site-wide: 20,009
    • In bioinformatics: 2,285
  • Year to date:
    • Site-wide: 104,827
  • Since beginning of last month:
    • Site-wide: 129,870

Neuronal and glial 3D chromatin architecture illustrates cellular etiology of brain disorders

neuroscience more details view paper
  • Downloaded 1,122 times
  • Download rankings, all-time:
    • Site-wide: 22,306
    • In neuroscience: 2,726
  • Year to date:
    • Site-wide: 26,241
  • Since beginning of last month:
    • Site-wide: 64,322

MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies

genetics more details view paper
  • Downloaded 1,056 times
  • Download rankings, all-time:
    • Site-wide: 24,436
    • In genetics: 1,090
  • Year to date:
    • Site-wide: 55,817
  • Since beginning of last month:
    • Site-wide: 114,582

A Possible Role Of Microglia In Zika Virus Infection Of The Fetal Human Brain

neuroscience more details view paper
  • Downloaded 1,050 times
  • Download rankings, all-time:
    • Site-wide: 24,635
    • In neuroscience: 3,029
  • Year to date:
    • Site-wide: 128,917
  • Since beginning of last month:
    • Site-wide: 143,380

GWAS of 19,629 individuals identifies novel genetic variants for regional brain volumes and refines their genetic co-architecture with cognitive and mental health traits

genetics more details view paper
  • Downloaded 974 times
  • Download rankings, all-time:
    • Site-wide: 27,578
    • In genetics: 1,233
  • Year to date:
    • Site-wide: 72,454
  • Since beginning of last month:
    • Site-wide: 52,914

Transcriptome-wide association analysis of 211 neuroimaging traits identifies new genes for brain structures and yields insights into the gene-level pleiotropy with other complex traits

genetics more details view paper
  • Downloaded 942 times
  • Download rankings, all-time:
    • Site-wide: 28,909
    • In genetics: 1,297
  • Year to date:
    • Site-wide: 37,104
  • Since beginning of last month:
    • Site-wide: 73,054

Parallel Characterization of cis-Regulatory Elements for Multiple Genes Using CRISPRpath

genomics more details view paper
  • Downloaded 867 times
  • Download rankings, all-time:
    • Site-wide: 32,525
    • In genomics: 2,784
  • Year to date:
    • Site-wide: 5,366
  • Since beginning of last month:
    • Site-wide: 3,609

Heritability of regional brain volumes in large-scale neuroimaging and genetic studies

genetics more details view paper
  • Downloaded 851 times
  • Download rankings, all-time:
    • Site-wide: 33,368
    • In genetics: 1,490
  • Year to date:
    • Site-wide: 125,873
  • Since beginning of last month:
    • Site-wide: 136,642

GWAS of epigenetic ageing rates in blood reveals a critical role for TERT

genetics more details view paper
  • Downloaded 845 times
  • Download rankings, all-time:
    • Site-wide: 33,690
    • In genetics: 1,509
  • Year to date:
    • Site-wide: 146,760
  • Since beginning of last month:
    • Site-wide: 125,826

MRLocus: identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity

bioinformatics more details view paper
  • Downloaded 841 times
  • Download rankings, all-time:
    • Site-wide: 33,899
    • In bioinformatics: 3,691
  • Year to date:
    • Site-wide: 33,002
  • Since beginning of last month:
    • Site-wide: 94,781

SnapHiC: a computational pipeline to map chromatin contacts from single cell Hi-C data

bioinformatics more details view paper
  • Downloaded 788 times
  • Download rankings, all-time:
    • Site-wide: 37,249
    • In bioinformatics: 4,005
  • Year to date:
    • Site-wide: 11,275
  • Since beginning of last month:
    • Site-wide: 36,572

Whole genome sequencing association analysis of quantitative red blood cell phenotypes: the NHLBI TOPMed program

hematology more details view paper
  • Downloaded 769 times
  • Download rankings, all-time:
    • Site-wide: 38,493
    • In hematology: 33
  • Year to date:
    • Site-wide: 9,625
  • Since beginning of last month:
    • Site-wide: 28,792

HUGIn: Hi-C Unifying Genomic Interrogator

genetics more details view paper
  • Downloaded 749 times
  • Download rankings, all-time:
    • Site-wide: 39,996
    • In genetics: 1,762
  • Year to date:
    • Site-wide: 154,315
  • Since beginning of last month:
    • Site-wide: 157,533

TWO-SIGMA: a novel TWO-component SInGle cell Model-based Association method for single-cell RNA-seq data

genomics more details view paper
  • Downloaded 712 times
  • Download rankings, all-time:
    • Site-wide: 42,877
    • In genomics: 3,420
  • Year to date:
    • Site-wide: 48,150
  • Since beginning of last month:
    • Site-wide: 56,516

Multi-SNP Mediation Intersection-Union Test

genetics more details view paper
  • Downloaded 696 times
  • Download rankings, all-time:
    • Site-wide: 44,139
    • In genetics: 1,942
  • Year to date:
    • Site-wide: 87,577
  • Since beginning of last month:
    • Site-wide: 116,064

Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations

genomics more details view paper
  • Downloaded 692 times
  • Download rankings, all-time:
    • Site-wide: 44,473
    • In genomics: 3,511
  • Year to date:
    • Site-wide: 127,885
  • Since beginning of last month:
    • Site-wide: 153,421

Association between ApoE polymorphism and type 2 diabetes: A meta-analysis of 59 studies

genetics more details view paper
  • Downloaded 647 times
  • Download rankings, all-time:
    • Site-wide: 48,563
    • In genetics: 2,130
  • Year to date:
    • Site-wide: 59,673
  • Since beginning of last month:
    • Site-wide: 53,355

SAME-clustering: Single-cell Aggregated Clustering via Mixture Model Ensemble

bioinformatics more details view paper
  • Downloaded 643 times
  • Download rankings, all-time:
    • Site-wide: 49,040
    • In bioinformatics: 5,017
  • Year to date:
    • Site-wide: 151,092
  • Since beginning of last month:
    • Site-wide: 129,910

Overarching control of autophagy and DNA damage response by CHD6 revealed by modeling a rare human pathology

cell biology more details view paper
  • Downloaded 642 times
  • Download rankings, all-time:
    • Site-wide: 49,142
    • In cell biology: 2,071
  • Year to date:
    • Site-wide: 52,114
  • Since beginning of last month:
    • Site-wide: 94,303

FIREcaller: Detecting Frequently Interacting Regions from Hi-C Data

bioinformatics more details view paper
  • Downloaded 568 times
  • Download rankings, all-time:
    • Site-wide: 57,496
    • In bioinformatics: 5,702
  • Year to date:
    • Site-wide: 104,850
  • Since beginning of last month:
    • Site-wide: 126,582

Methylome-Wide Association Study Of Central Adiposity Implicates Genes Involved In Immune And Endocrine Systems

genomics more details view paper
  • Downloaded 535 times
  • Download rankings, all-time:
    • Site-wide: 61,637
    • In genomics: 4,462
  • Year to date:
    • Site-wide: 56,741
  • Since beginning of last month:
    • Site-wide: 79,941

Generation of Cynomolgus Monkeys (Macaca fascicularis) Embryos with ICSI Based on the MII-Stage Oocytes Acquired by Personalized Superovulation Protocol

developmental biology more details view paper
  • Downloaded 423 times
  • Download rankings, all-time:
    • Site-wide: 79,596
    • In developmental biology: 2,037
  • Year to date:
    • Site-wide: 87,562
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    • Site-wide: 125,462

iSMNN: Batch Effect Correction for Single-cell RNA-seq data via Iterative Supervised Mutual Nearest Neighbor Refinement

bioinformatics more details view paper
  • Downloaded 419 times
  • Download rankings, all-time:
    • Site-wide: 80,306
    • In bioinformatics: 7,333
  • Year to date:
    • Site-wide: 26,092
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    • Site-wide: 80,676

The Characteristic of Auditory Function and Cochlear Pathophysiology in a Noise-exposed Cohort: A Cross-sectional Study

otolaryngology more details view paper
  • Downloaded 394 times
  • Download rankings, all-time:
    • Site-wide: 85,202
    • In otolaryngology: 62
  • Year to date:
    • Site-wide: 38,845
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    • Site-wide: 89,368

THUNDER: A reference-free deconvolution method to infer cell type proportions from bulk Hi-C data

bioinformatics more details view paper
  • Downloaded 393 times
  • Download rankings, all-time:
    • Site-wide: 85,590
    • In bioinformatics: 7,668
  • Year to date:
    • Site-wide: 40,814
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    • Site-wide: 8,104

Characterizing sensitivity and coverage of clinical WGS as a diagnostic test for genetic disorders

genomics more details view paper
  • Downloaded 388 times
  • Download rankings, all-time:
    • Site-wide: 86,477
    • In genomics: 5,566
  • Year to date:
    • Site-wide: 44,397
  • Since beginning of last month:
    • Site-wide: 53,440

From GWAS Variant to Function: a Study of ~148,000 Variants for Blood Cell Traits.

genetics more details view paper
  • Downloaded 383 times
  • Download rankings, all-time:
    • Site-wide: 87,529
    • In genetics: 3,736
  • Year to date:
    • Site-wide: 18,249
  • Since beginning of last month:
    • Site-wide: 27,294

Genetic control of fetal placental genomics contributes to development of health and disease

genetic and genomic medicine more details view paper
  • Downloaded 379 times
  • Download rankings, all-time:
    • Site-wide: 88,197
    • In genetic and genomic medicine: 418
  • Year to date:
    • Site-wide: 18,573
  • Since beginning of last month:
    • Site-wide: 6,219

Integrative methylome and transcriptome analysis of Japanese flounder (Paralichthys olivaceus) skeletal muscle during development

epidemiology more details view paper
  • Downloaded 349 times
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    • Site-wide: 95,038
    • In epidemiology: 4,046
  • Year to date:
    • Site-wide: 126,039
  • Since beginning of last month:
    • Site-wide: 116,884

TWO-SIGMA-G: A New Competitive Gene Set Testing Framework for scRNA-seq Data Accounting for Inter-Gene and Cell-Cell Correlation

genomics more details view paper
  • Downloaded 316 times
  • Download rankings, all-time:
    • Site-wide: 102,720
    • In genomics: 6,171
  • Year to date:
    • Site-wide: 24,196
  • Since beginning of last month:
    • Site-wide: 17,519

A large-scale transcriptome-wide association study (TWAS) of ten blood cell phenotypes reveals complexities of TWAS fine-mapping

genetics more details view paper
  • Downloaded 314 times
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    • Site-wide: 103,329
    • In genetics: 4,331
  • Year to date:
    • Site-wide: 24,347
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    • Site-wide: 36,608

CUE: CpG impUtation Ensemble for DNA Methylation Levels Across the Human Methylation450 (HM450) and EPIC (HM850) BeadChip Platforms

bioinformatics more details view paper
  • Downloaded 297 times
  • Download rankings, all-time:
    • Site-wide: 107,392
    • In bioinformatics: 9,029
  • Year to date:
    • Site-wide: 80,526
  • Since beginning of last month:
    • Site-wide: 94,838

HiC-ACT: Improved Detection of Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test

bioinformatics more details view paper
  • Downloaded 283 times
  • Download rankings, all-time:
    • Site-wide: 110,870
    • In bioinformatics: 9,252
  • Year to date:
    • Site-wide: 68,947
  • Since beginning of last month:
    • Site-wide: 88,561

Generalized Multi-SNP Mediation Intersection-Union Test

genetics more details view paper
  • Downloaded 277 times
  • Download rankings, all-time:
    • Site-wide: 112,386
    • In genetics: 4,665
  • Year to date:
    • Site-wide: 138,520
  • Since beginning of last month:
    • Site-wide: 121,774

Phased implementation of COVID-19 vaccination: rapid assessment of policy adoption, reach and effectiveness to protect the most vulnerable in the US

health policy more details view paper
  • Downloaded 257 times
  • Download rankings, all-time:
    • Site-wide: 117,705
    • In health policy: 290
  • Year to date:
    • Site-wide: 31,879
  • Since beginning of last month:
    • Site-wide: 34,661

MUNIn (Multiple sample UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple samples

genetics more details view paper
  • Downloaded 224 times
  • Download rankings, all-time:
    • Site-wide: 126,179
    • In genetics: 5,141
  • Year to date:
    • Site-wide: 78,773
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    • Site-wide: 64,068

Super interactive promoters provide insight into cell type-specific regulatory networks in blood lineage cell types

genetics more details view paper
  • Downloaded 216 times
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    • Site-wide: 128,258
    • In genetics: 5,197
  • Year to date:
    • Site-wide: 39,700
  • Since beginning of last month:
    • Site-wide: 55,790

HPRep: Quantifying reproducibility in HiChIP and PLAC-seq datasets

genomics more details view paper
  • Downloaded 208 times
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    • Site-wide: 130,436
    • In genomics: 7,039
  • Year to date:
    • Site-wide: 62,890
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    • Site-wide: 33,776

eSCAN: Scan Regulatory Regions for Aggregate Association Testing using Whole Genome Sequencing Data

genetics more details view paper
  • Downloaded 207 times
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    • Site-wide: 130,601
    • In genetics: 5,279
  • Year to date:
    • Site-wide: 62,646
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    • Site-wide: 46,014

Genome engineering of Nannochloropsis with large deletions for constructing microalgal minigenomes

biochemistry more details view paper
  • Downloaded 198 times
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    • Site-wide: 132,923
    • In biochemistry: 4,023
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    • Site-wide: 103,624
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    • Site-wide: 119,659

The efficacy and safety of bamlanivimab treatment against COVID-19: A meta-analysis

pharmacology and therapeutics more details view paper
  • Downloaded 193 times
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    • Site-wide: 134,057
    • In pharmacology and therapeutics: 138
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    • Site-wide: 45,423
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    • Site-wide: 9,008

Genetic influences on the intrinsic and extrinsic functional organizations of the cerebral cortex

genetic and genomic medicine more details view paper
  • Downloaded 176 times
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    • Site-wide: 138,314
    • In genetic and genomic medicine: 791
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    • Site-wide: 50,483
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    • Site-wide: 59,555

Transcriptome-wide association study in UK Biobank Europeans identifies associations with blood cell traits.

genetics more details view paper
  • Downloaded 158 times
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    • Site-wide: 142,417
    • In genetics: 5,643
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