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Author: Yun Li

  • ORCiD: http://orcid.org/0000-0002-9275-4189
  • Most recently observed institution: Department of Biostatistics, Department of Genetics, Department of Computer Science, University of North Carolina-Chapel Hill

Rankings

  • All-time downloads: 62,424 (rank: 2,483 )
  • Categories:
    • biochemistry: 178 (rank: 23,197 (tie) )
    • bioinformatics: 16,567 (rank: 391 )
    • cell biology: 597 (rank: 17,234 (tie) )
    • developmental biology: 392 (rank: 12,575 (tie) )
    • epidemiology: 3,311 (rank: 3,886 (tie) )
    • genetic and genomic medicine: 2,272 (rank: 1,424 )
    • genetics: 25,648 (rank: 289 )
    • genomics: 7,671 (rank: 2,989 )
    • health policy: 197 (rank: 1,461 (tie) )
    • hematology: 657 (rank: 413 (tie) )
    • microbiology: 1,247 (rank: 12,705 (tie) )
    • neuroscience: 2,090 (rank: 11,509 (tie) )
    • otolaryngology: 349 (rank: 416 (tie) )
    • scientific communication and education: 1,248 (rank: 733 (tie) )

Downloads per author, site-wide

Preprints

Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

genetics more details view paper
  • Downloaded 9,438 times
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    • Site-wide: 983
    • In genetics: 26
  • Year to date:
    • Site-wide: 43,437
  • Since beginning of last month:
    • Site-wide: 61,631

Multi-epitope vaccine design using an immunoinformatics approach for 2019 novel coronavirus (SARS-CoV-2)

bioinformatics more details view paper
  • Downloaded 3,043 times
  • Download rankings, all-time:
    • Site-wide: 4,611
    • In bioinformatics: 455
  • Year to date:
    • Site-wide: 13,003
  • Since beginning of last month:
    • Site-wide: 14,601

An epigenetic biomarker of aging for lifespan and healthspan

epidemiology more details view paper
  • Downloaded 2,987 times
  • Download rankings, all-time:
    • Site-wide: 4,735
    • In epidemiology: 443
  • Year to date:
    • Site-wide: 43,986
  • Since beginning of last month:
    • Site-wide: 39,038

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

bioinformatics more details view paper
  • Downloaded 2,975 times
  • Download rankings, all-time:
    • Site-wide: 4,760
    • In bioinformatics: 475
  • Year to date:
    • Site-wide: 65,711
  • Since beginning of last month:
    • Site-wide: 77,552

SAFE-clustering: Single-cell Aggregated (From Ensemble) Clustering for Single-cell RNA-seq Data

bioinformatics more details view paper
  • Downloaded 2,906 times
  • Download rankings, all-time:
    • Site-wide: 4,919
    • In bioinformatics: 489
  • Year to date:
    • Site-wide: 39,143
  • Since beginning of last month:
    • Site-wide: 43,600

Trans-ethnic and ancestry-specific blood-cell genetics in 746,667 individuals from 5 global populations

genetics more details view paper
  • Downloaded 2,686 times
  • Download rankings, all-time:
    • Site-wide: 5,515
    • In genetics: 237
  • Year to date:
    • Site-wide: 5,300
  • Since beginning of last month:
    • Site-wide: 7,565

Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits

genetics more details view paper
  • Downloaded 2,449 times
  • Download rankings, all-time:
    • Site-wide: 6,343
    • In genetics: 281
  • Year to date:
    • Site-wide: 9,588
  • Since beginning of last month:
    • Site-wide: 7,668

The Polygenic and Monogenic Basis of Blood Traits and Diseases

genetic and genomic medicine more details view paper
  • Downloaded 2,062 times
  • Download rankings, all-time:
    • Site-wide: 8,119
    • In genetic and genomic medicine: 35
  • Year to date:
    • Site-wide: 32,654
  • Since beginning of last month:
    • Site-wide: 47,321

3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

genomics more details view paper
  • Downloaded 1,838 times
  • Download rankings, all-time:
    • Site-wide: 9,647
    • In genomics: 995
  • Year to date:
    • Site-wide: 13,098
  • Since beginning of last month:
    • Site-wide: 17,380

Large-scale GWAS reveals genetic architecture of brain white matter microstructure and genetic overlap with cognitive and mental health traits (n=17,706)

genetics more details view paper
  • Downloaded 1,724 times
  • Download rankings, all-time:
    • Site-wide: 10,601
    • In genetics: 477
  • Year to date:
    • Site-wide: 63,865
  • Since beginning of last month:
    • Site-wide: 65,915

Common DNA sequence variation influences 3-dimensional conformation of the human genome

genomics more details view paper
  • Downloaded 1,499 times
  • Download rankings, all-time:
    • Site-wide: 12,988
    • In genomics: 1,352
  • Year to date:
    • Site-wide: 126,374
  • Since beginning of last month:
    • Site-wide: 104,377

Common genetic variation influencing human white matter microstructure

genetics more details view paper
  • Downloaded 1,497 times
  • Download rankings, all-time:
    • Site-wide: 13,014
    • In genetics: 600
  • Year to date:
    • Site-wide: 4,510
  • Since beginning of last month:
    • Site-wide: 1,213

SCDC: Bulk Gene Expression Deconvolution by Multiple Single-Cell RNA Sequencing References

bioinformatics more details view paper
  • Downloaded 1,395 times
  • Download rankings, all-time:
    • Site-wide: 14,510
    • In bioinformatics: 1,692
  • Year to date:
    • Site-wide: 45,083
  • Since beginning of last month:
    • Site-wide: 53,220

Robust Hi-C chromatin loop maps in human neurogenesis and brain tissues at high-resolution

genomics more details view paper
  • Downloaded 1,390 times
  • Download rankings, all-time:
    • Site-wide: 14,588
    • In genomics: 1,487
  • Year to date:
    • Site-wide: 18,803
  • Since beginning of last month:
    • Site-wide: 32,040

SMNN: Batch Effect Correction for Single-cell RNA-seq data via Supervised Mutual Nearest Neighbor Detection

bioinformatics more details view paper
  • Downloaded 1,292 times
  • Download rankings, all-time:
    • Site-wide: 16,297
    • In bioinformatics: 1,915
  • Year to date:
    • Site-wide: 41,976
  • Since beginning of last month:
    • Site-wide: 46,693

The Big Five, Self-efficacy, and Self-control in Boxers

scientific communication and education more details view paper
  • Downloaded 1,248 times
  • Download rankings, all-time:
    • Site-wide: 17,142
    • In scientific communication and education: 138
  • Year to date:
    • Site-wide: 22,400
  • Since beginning of last month:
    • Site-wide: 26,832

The intestinal microbiota programs diurnal rhythms in host metabolism through histone deacetylase 3

microbiology more details view paper
  • Downloaded 1,247 times
  • Download rankings, all-time:
    • Site-wide: 17,171
    • In microbiology: 999
  • Year to date:
    • Site-wide: 86,025
  • Since beginning of last month:
    • Site-wide: 72,626

MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

bioinformatics more details view paper
  • Downloaded 1,173 times
  • Download rankings, all-time:
    • Site-wide: 18,813
    • In bioinformatics: 2,184
  • Year to date:
    • Site-wide: 105,254
  • Since beginning of last month:
    • Site-wide: 79,178

Neuronal and glial 3D chromatin architecture illustrates cellular etiology of brain disorders

neuroscience more details view paper
  • Downloaded 1,052 times
  • Download rankings, all-time:
    • Site-wide: 22,071
    • In neuroscience: 2,748
  • Year to date:
    • Site-wide: 22,604
  • Since beginning of last month:
    • Site-wide: 24,300

A Possible Role Of Microglia In Zika Virus Infection Of The Fetal Human Brain

neuroscience more details view paper
  • Downloaded 1,038 times
  • Download rankings, all-time:
    • Site-wide: 22,556
    • In neuroscience: 2,808
  • Year to date:
    • Site-wide: 105,013
  • Since beginning of last month:
    • Site-wide: 77,833

MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies

genetics more details view paper
  • Downloaded 1,013 times
  • Download rankings, all-time:
    • Site-wide: 23,308
    • In genetics: 1,078
  • Year to date:
    • Site-wide: 48,268
  • Since beginning of last month:
    • Site-wide: 99,508

GWAS of 19,629 individuals identifies novel genetic variants for regional brain volumes and refines their genetic co-architecture with cognitive and mental health traits

genetics more details view paper
  • Downloaded 923 times
  • Download rankings, all-time:
    • Site-wide: 26,706
    • In genetics: 1,239
  • Year to date:
    • Site-wide: 74,393
  • Since beginning of last month:
    • Site-wide: 80,627

Transcriptome-wide association analysis of 211 neuroimaging traits identifies new genes for brain structures and yields insights into the gene-level pleiotropy with other complex traits

genetics more details view paper
  • Downloaded 909 times
  • Download rankings, all-time:
    • Site-wide: 27,284
    • In genetics: 1,270
  • Year to date:
    • Site-wide: 27,370
  • Since beginning of last month:
    • Site-wide: 58,741

Heritability of regional brain volumes in large-scale neuroimaging and genetic studies

genetics more details view paper
  • Downloaded 832 times
  • Download rankings, all-time:
    • Site-wide: 30,876
    • In genetics: 1,439
  • Year to date:
    • Site-wide: 111,025
  • Since beginning of last month:
    • Site-wide: 97,341

GWAS of epigenetic ageing rates in blood reveals a critical role for TERT

genetics more details view paper
  • Downloaded 828 times
  • Download rankings, all-time:
    • Site-wide: 31,080
    • In genetics: 1,446
  • Year to date:
    • Site-wide: 137,685
  • Since beginning of last month:
    • Site-wide: 135,129

MRLocus: identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity

bioinformatics more details view paper
  • Downloaded 799 times
  • Download rankings, all-time:
    • Site-wide: 32,666
    • In bioinformatics: 3,624
  • Year to date:
    • Site-wide: 25,205
  • Since beginning of last month:
    • Site-wide: 51,321

HUGIn: Hi-C Unifying Genomic Interrogator

genetics more details view paper
  • Downloaded 740 times
  • Download rankings, all-time:
    • Site-wide: 36,380
    • In genetics: 1,677
  • Year to date:
    • Site-wide: 137,610
  • Since beginning of last month:
    • Site-wide: 121,149

Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations

genomics more details view paper
  • Downloaded 681 times
  • Download rankings, all-time:
    • Site-wide: 40,645
    • In genomics: 3,326
  • Year to date:
    • Site-wide: 103,253
  • Since beginning of last month:
    • Site-wide: 134,973

Multi-SNP Mediation Intersection-Union Test

genetics more details view paper
  • Downloaded 669 times
  • Download rankings, all-time:
    • Site-wide: 41,634
    • In genetics: 1,895
  • Year to date:
    • Site-wide: 74,475
  • Since beginning of last month:
    • Site-wide: 53,059

SnapHiC: a computational pipeline to map chromatin contacts from single cell Hi-C data

bioinformatics more details view paper
  • Downloaded 666 times
  • Download rankings, all-time:
    • Site-wide: 41,866
    • In bioinformatics: 4,471
  • Year to date:
    • Site-wide: 10,107
  • Since beginning of last month:
    • Site-wide: 13,472

Whole genome sequencing association analysis of quantitative red blood cell phenotypes: the NHLBI TOPMed program

hematology more details view paper
  • Downloaded 657 times
  • Download rankings, all-time:
    • Site-wide: 42,598
    • In hematology: 30
  • Year to date:
    • Site-wide: 8,018
  • Since beginning of last month:
    • Site-wide: 21,409

TWO-SIGMA: a novel TWO-component SInGle cell Model-based Association method for single-cell RNA-seq data

genomics more details view paper
  • Downloaded 651 times
  • Download rankings, all-time:
    • Site-wide: 43,101
    • In genomics: 3,484
  • Year to date:
    • Site-wide: 46,245
  • Since beginning of last month:
    • Site-wide: 95,099

Parallel Characterization of cis-Regulatory Elements for Multiple Genes Using CRISPRpath

genomics more details view paper
  • Downloaded 651 times
  • Download rankings, all-time:
    • Site-wide: 43,133
    • In genomics: 3,483
  • Year to date:
    • Site-wide: 5,069
  • Since beginning of last month:
    • Site-wide: 15,065

SAME-clustering: Single-cell Aggregated Clustering via Mixture Model Ensemble

bioinformatics more details view paper
  • Downloaded 631 times
  • Download rankings, all-time:
    • Site-wide: 44,800
    • In bioinformatics: 4,696
  • Year to date:
    • Site-wide: 135,789
  • Since beginning of last month:
    • Site-wide: 133,210

Overarching control of autophagy and DNA damage response by CHD6 revealed by modeling a rare human pathology

cell biology more details view paper
  • Downloaded 597 times
  • Download rankings, all-time:
    • Site-wide: 47,974
    • In cell biology: 2,040
  • Year to date:
    • Site-wide: 44,759
  • Since beginning of last month:
    • Site-wide: 97,737

Association between ApoE polymorphism and type 2 diabetes: A meta-analysis of 59 studies

genetics more details view paper
  • Downloaded 593 times
  • Download rankings, all-time:
    • Site-wide: 48,410
    • In genetics: 2,183
  • Year to date:
    • Site-wide: 58,491
  • Since beginning of last month:
    • Site-wide: 52,898

FIREcaller: Detecting Frequently Interacting Regions from Hi-C Data

bioinformatics more details view paper
  • Downloaded 548 times
  • Download rankings, all-time:
    • Site-wide: 53,441
    • In bioinformatics: 5,423
  • Year to date:
    • Site-wide: 87,108
  • Since beginning of last month:
    • Site-wide: 112,775

Methylome-Wide Association Study Of Central Adiposity Implicates Genes Involved In Immune And Endocrine Systems

genomics more details view paper
  • Downloaded 477 times
  • Download rankings, all-time:
    • Site-wide: 62,495
    • In genomics: 4,504
  • Year to date:
    • Site-wide: 56,283
  • Since beginning of last month:
    • Site-wide: 35,479

Generation of Cynomolgus Monkeys (Macaca fascicularis) Embryos with ICSI Based on the MII-Stage Oocytes Acquired by Personalized Superovulation Protocol

developmental biology more details view paper
  • Downloaded 392 times
  • Download rankings, all-time:
    • Site-wide: 76,421
    • In developmental biology: 1,941
  • Year to date:
    • Site-wide: 77,476
  • Since beginning of last month:
    • Site-wide: 71,447

iSMNN: Batch Effect Correction for Single-cell RNA-seq data via Iterative Supervised Mutual Nearest Neighbor Refinement

bioinformatics more details view paper
  • Downloaded 375 times
  • Download rankings, all-time:
    • Site-wide: 79,495
    • In bioinformatics: 7,294
  • Year to date:
    • Site-wide: 19,348
  • Since beginning of last month:
    • Site-wide: 37,425

The Characteristic of Auditory Function and Cochlear Pathophysiology in a Noise-exposed Cohort: A Cross-sectional Study

otolaryngology more details view paper
  • Downloaded 349 times
  • Download rankings, all-time:
    • Site-wide: 84,541
    • In otolaryngology: 57
  • Year to date:
    • Site-wide: 31,173
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    • Site-wide: 33,338

Characterizing sensitivity and coverage of clinical WGS as a diagnostic test for genetic disorders

genomics more details view paper
  • Downloaded 344 times
  • Download rankings, all-time:
    • Site-wide: 85,527
    • In genomics: 5,510
  • Year to date:
    • Site-wide: 36,697
  • Since beginning of last month:
    • Site-wide: 42,682

Integrative methylome and transcriptome analysis of Japanese flounder (Paralichthys olivaceus) skeletal muscle during development

epidemiology more details view paper
  • Downloaded 324 times
  • Download rankings, all-time:
    • Site-wide: 89,879
    • In epidemiology: 3,731
  • Year to date:
    • Site-wide: 120,573
  • Since beginning of last month:
    • Site-wide: 117,726

From GWAS Variant to Function: a Study of ~148,000 Variants for Blood Cell Traits.

genetics more details view paper
  • Downloaded 308 times
  • Download rankings, all-time:
    • Site-wide: 93,333
    • In genetics: 4,065
  • Year to date:
    • Site-wide: 15,022
  • Since beginning of last month:
    • Site-wide: 28,774

CUE: CpG impUtation Ensemble for DNA Methylation Levels Across the Human Methylation450 (HM450) and EPIC (HM850) BeadChip Platforms

bioinformatics more details view paper
  • Downloaded 267 times
  • Download rankings, all-time:
    • Site-wide: 102,695
    • In bioinformatics: 8,777
  • Year to date:
    • Site-wide: 68,158
  • Since beginning of last month:
    • Site-wide: 73,094

THUNDER: A reference-free deconvolution method to infer cell type proportions from bulk Hi-C data

bioinformatics more details view paper
  • Downloaded 262 times
  • Download rankings, all-time:
    • Site-wide: 103,956
    • In bioinformatics: 8,863
  • Year to date:
    • Site-wide: 68,223
  • Since beginning of last month:
    • Site-wide: 68,165

Generalized Multi-SNP Mediation Intersection-Union Test

genetics more details view paper
  • Downloaded 261 times
  • Download rankings, all-time:
    • Site-wide: 104,129
    • In genetics: 4,486
  • Year to date:
    • Site-wide: 123,903
  • Since beginning of last month:
    • Site-wide: 120,383

A large-scale transcriptome-wide association study (TWAS) of ten blood cell phenotypes reveals complexities of TWAS fine-mapping

genetics more details view paper
  • Downloaded 249 times
  • Download rankings, all-time:
    • Site-wide: 107,162
    • In genetics: 4,597
  • Year to date:
    • Site-wide: 20,025
  • Since beginning of last month:
    • Site-wide: 76,895

HiC-ACT: Improved Detection of Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test

bioinformatics more details view paper
  • Downloaded 235 times
  • Download rankings, all-time:
    • Site-wide: 110,564
    • In bioinformatics: 9,249
  • Year to date:
    • Site-wide: 67,089
  • Since beginning of last month:
    • Site-wide: 63,531

Genetic control of fetal placental genomics contributes to development of health and disease

genetic and genomic medicine more details view paper
  • Downloaded 210 times
  • Download rankings, all-time:
    • Site-wide: 116,711
    • In genetic and genomic medicine: 601
  • Year to date:
    • Site-wide: 25,096
  • Since beginning of last month:
    • Site-wide: 8,958

Phased implementation of COVID-19 vaccination: rapid assessment of policy adoption, reach and effectiveness to protect the most vulnerable in the US

health policy more details view paper
  • Downloaded 197 times
  • Download rankings, all-time:
    • Site-wide: 119,729
    • In health policy: 275
  • Year to date:
    • Site-wide: 27,144
  • Since beginning of last month:
    • Site-wide: 52,181

MUNIn (Multiple sample UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple samples

genetics more details view paper
  • Downloaded 194 times
  • Download rankings, all-time:
    • Site-wide: 120,465
    • In genetics: 5,059
  • Year to date:
    • Site-wide: 66,975
  • Since beginning of last month:
    • Site-wide: 108,346

Genome engineering of Nannochloropsis with large deletions for constructing microalgal minigenomes

biochemistry more details view paper
  • Downloaded 178 times
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    • Site-wide: 124,394
    • In biochemistry: 3,712
  • Year to date:
    • Site-wide: 84,843
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    • Site-wide: 54,731

Super interactive promoters provide insight into cell type-specific regulatory networks in blood lineage cell types

genetics more details view paper
  • Downloaded 177 times
  • Download rankings, all-time:
    • Site-wide: 124,585
    • In genetics: 5,171
  • Year to date:
    • Site-wide: 30,833
  • Since beginning of last month:
    • Site-wide: 84,520

eSCAN: Scan Regulatory Regions for Aggregate Association Testing using Whole Genome Sequencing Data

genetics more details view paper
  • Downloaded 158 times
  • Download rankings, all-time:
    • Site-wide: 128,834
    • In genetics: 5,307
  • Year to date:
    • Site-wide: 59,198
  • Since beginning of last month:
    • Site-wide: 101,042

HPRep: Quantifying reproducibility in HiChIP and PLAC-seq datasets

genomics more details view paper
  • Downloaded 140 times
  • Download rankings, all-time:
    • Site-wide: 132,919
    • In genomics: 7,065
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    • Site-wide: 71,466
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    • Site-wide: 74,327

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