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Author: Carlo Colantuoni

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  • All-time downloads: 29,925 (rank: 9,499 )
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    • bioinformatics: 5,123 (rank: 3,301 (tie) )
    • developmental biology: 463 (rank: 17,076 (tie) )
    • genetics: 3,583 (rank: 6,406 (tie) )
    • genomics: 1,195 (rank: 26,121 (tie) )
    • neuroscience: 17,747 (rank: 783 )

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Preprints

Structured Joint Decomposition (SJD) identifies conserved molecular dynamics across collections of biologically related multi-omics data matrices

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An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

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A multimodal cell census and atlas of the mammalian primary motor cortex

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Developmental And Genetic Regulation Of The Human Cortex Transcriptome In Schizophrenia

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Decomposing cell identity for transfer learning across cellular measurements, platforms, tissues, and species.

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Genome-scale transcriptional regulatory network models of psychiatric and neurodegenerative disorders

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Placental gene expression mediates the interaction between obstetrical history and genetic risk for schizophrenia

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Variation of human neural stem cells generating organizer states in vitro before committing to cortical excitatory or inhibitory neuronal fates

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projectR: An R/Bioconductor package for transfer learning via PCA, NMF, correlation, and clustering

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Two-stage Linked Component Analysis for Joint Decomposition of Multiple Biologically Related Data Sets

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gEAR: gene Expression Analysis Resource portal for community-driven, multi-omic data exploration

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PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF

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Single-nucleus RNA-seq reveals dysregulation of striatal cell identity due to Huntington's disease mutations

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Expression bias in retinoic acid responsive genes defines variations in neural differentiation of human pluripotent stem cells

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Single-cell genomics reveals region-specific developmental trajectories underlying neuronal diversity in the human hypothalamus

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Cochlear organoids reveal epigenetic and transcriptional programs of postnatal hair cell differentiation from supporting cells

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Regulome-wide association study identifies enhancer properties associated with risk for schizophrenia

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UPREGULATION OF SUPEROXIDE DISMUTASE 2 BY ASTROCYTES IN THE SIV/MACAQUE MODEL OF HIV-ASSOCIATED NEUROLOGIC DISEASE

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Insights for disease modeling from single cell transcriptomics of iPSC-derived neurons and astrocytes across differentiation time and co-culture

genetics more details view paper
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The Neuroscience Multi-Omic Archive: A BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain

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Early-childhood inflammation blunts the transcriptional maturation of cerebellar neurons

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