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Author: David van Dijk

Rankings

  • All-time downloads: 57,113 (rank: 694 out of 424,434)
  • Categories:
    • bioinformatics: 42,293 (rank: 62 out of 35,926)
    • genetics: 7,681 (rank: 2,043 (tie) out of 37,731)
    • microbiology: 5,645 (rank: 1,535 out of 49,965)
    • systems biology: 1,494 (rank: 2,084 (tie) out of 12,231)

Downloads per author, site-wide

Preprints

Generating hard-to-obtain information from easy-to-obtain information: applications in drug discovery and clinical inference

bioinformatics more details view paper

No bioRxiv download data for this paper yet.

Visualizing Structure and Transitions for Biological Data Exploration

bioinformatics more details view paper
  • Downloaded 15,659 times
  • Download rankings, all-time:
    • Site-wide: 129 out of 100,478
    • In bioinformatics: 13 out of 9,232
  • Year to date:
    • Site-wide: 532 out of 100,478
  • Since beginning of last month:
    • Site-wide: None out of 100,478

MAGIC: A diffusion-based imputation method reveals gene-gene interactions in single-cell RNA-sequencing data

bioinformatics more details view paper
  • Downloaded 14,264 times
  • Download rankings, all-time:
    • Site-wide: 147 out of 100,478
    • In bioinformatics: 16 out of 9,232
  • Year to date:
    • Site-wide: 2,276 out of 100,478
  • Since beginning of last month:
    • Site-wide: 1,721 out of 100,478

Genome-wide CRISPR screen reveals host genes that regulate SARS-CoV-2 infection

genetics more details view paper
  • Downloaded 7,681 times
  • Download rankings, all-time:
    • Site-wide: 404 out of 100,478
    • In genetics: 27 out of 5,008
  • Year to date:
    • Site-wide: 141 out of 100,478
  • Since beginning of last month:
    • Site-wide: None out of 100,478

Exploring Single-Cell Data with Deep Multitasking Neural Networks

bioinformatics more details view paper
  • Downloaded 6,948 times
  • Download rankings, all-time:
    • Site-wide: 472 out of 100,478
    • In bioinformatics: 66 out of 9,232
  • Year to date:
    • Site-wide: 2,202 out of 100,478
  • Since beginning of last month:
    • Site-wide: 1,514 out of 100,478

Single-cell longitudinal analysis of SARS-CoV-2 infection in human airway epithelium

microbiology more details view paper
  • Downloaded 5,458 times
  • Download rankings, all-time:
    • Site-wide: 716 out of 100,478
    • In microbiology: 105 out of 8,907
  • Year to date:
    • Site-wide: 221 out of 100,478
  • Since beginning of last month:
    • Site-wide: 355 out of 100,478

Quantifying the effect of experimental perturbations in single-cell RNA-sequencing data using graph signal processing

bioinformatics more details view paper
  • Downloaded 3,148 times
  • Download rankings, all-time:
    • Site-wide: 1,884 out of 100,478
    • In bioinformatics: 329 out of 9,232
  • Year to date:
    • Site-wide: 1,467 out of 100,478
  • Since beginning of last month:
    • Site-wide: 970 out of 100,478

Embedding single-cell experimental conditions to reveal manifold structure of cancer drug perturbation effects

bioinformatics more details view paper
  • Downloaded 2,007 times
  • Download rankings, all-time:
    • Site-wide: 3,946 out of 100,478
    • In bioinformatics: 707 out of 9,232
  • Year to date:
    • Site-wide: 7,810 out of 100,478
  • Since beginning of last month:
    • Site-wide: 7,707 out of 100,478

Competition between binding sites determines gene expression at low transcription factor concentrations

systems biology more details view paper
  • Downloaded 1,494 times
  • Download rankings, all-time:
    • Site-wide: 6,489 out of 100,478
    • In systems biology: 170 out of 2,555
  • Year to date:
    • Site-wide: 48,419 out of 100,478
  • Since beginning of last month:
    • Site-wide: None out of 100,478

The COVID-19 PHARMACOME: Rational Selection of Drug Repurposing Candidates from Multimodal Knowledge Harmonization

bioinformatics more details view paper
  • Downloaded 267 times
  • Download rankings, all-time:
    • Site-wide: 63,509 out of 100,478
    • In bioinformatics: 6,812 out of 9,232
  • Year to date:
    • Site-wide: 16,090 out of 100,478
  • Since beginning of last month:
    • Site-wide: 719 out of 100,478

A novel toxin-antitoxin module SlvT-SlvA governs megaplasmid stability and incites solvent tolerance in Pseudomonas putida S12

microbiology more details view paper
  • Downloaded 187 times
  • Download rankings, all-time:
    • Site-wide: 77,477 out of 100,478
    • In microbiology: 6,306 out of 8,907
  • Year to date:
    • Site-wide: 26,155 out of 100,478
  • Since beginning of last month:
    • Site-wide: None out of 100,478

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News

  • 20 Oct 2020: Support for sorting preprints using Twitter activity has been removed, at least temporarily, until a new source of social media activity data becomes available.
  • 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
  • 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
  • 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
  • 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
  • 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
  • 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
  • 22 Jan 2019: Nature just published an article about Rxivist and our data.
  • 13 Jan 2019: The Rxivist preprint is live!