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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 57,822 bioRxiv papers from 266,142 authors.

Author: Matthew J Simpson

Rankings

  • All-time downloads: 7,565 (rank: 5,341 out of 266,142)
  • Categories:
    • biophysics: 4,856 (rank: 82 out of 9,944)
    • cancer biology: 573 (rank: 4,919 (tie) out of 15,438)
    • cell biology: 816 (rank: 2,969 out of 16,921)
    • developmental biology: 671 (rank: 2,140 (tie) out of 9,455)
    • systems biology: 649 (rank: 2,725 out of 7,858)

Downloads per author, site-wide

Preprints

Continuum descriptions of spatial spreading for heterogeneous cell populations: theory and experiment

biophysics more details view paper

No bioRxiv download data for this paper yet.

Exact solutions of linear reaction-diffusion processes on a uniformly growing domain: Criteria for successful colonization

developmental biology more details view paper
  • Downloaded 671 times
  • Download rankings, all-time:
    • Site-wide: 11,905 out of 57,822
    • In developmental biology: 278 out of 1,725
  • Year to date:
    • Site-wide: 40,365 out of 57,822
  • Since beginning of last month:
    • Site-wide: 51,702 out of 57,822

Quantifying Rates Of Cell Migration And Cell Proliferation In Co-Culture Barrier Assays Reveals How Skin And Melanoma Cells Interact During Melanoma Spreading And Invasion

cancer biology more details view paper
  • Downloaded 573 times
  • Download rankings, all-time:
    • Site-wide: 14,808 out of 57,822
    • In cancer biology: 430 out of 1,870
  • Year to date:
    • Site-wide: 38,425 out of 57,822
  • Since beginning of last month:
    • Site-wide: 32,547 out of 57,822

Choosing an appropriate modelling framework for analysing multispecies co-culture cell biology experiments

cell biology more details view paper
  • Downloaded 529 times
  • Download rankings, all-time:
    • Site-wide: 16,433 out of 57,822
    • In cell biology: 665 out of 2,743
  • Year to date:
    • Site-wide: 48,162 out of 57,822
  • Since beginning of last month:
    • Site-wide: 35,430 out of 57,822

Accelerating computational Bayesian inference for stochastic biochemical reaction network models using multilevel Monte Carlo sampling

systems biology more details view paper
  • Downloaded 487 times
  • Download rankings, all-time:
    • Site-wide: 18,205 out of 57,822
    • In systems biology: 561 out of 1,638
  • Year to date:
    • Site-wide: 50,241 out of 57,822
  • Since beginning of last month:
    • Site-wide: 55,988 out of 57,822

Logistic proliferation of cells in scratch assays is delayed

biophysics more details view paper
  • Downloaded 458 times
  • Download rankings, all-time:
    • Site-wide: 19,524 out of 57,822
    • In biophysics: 685 out of 2,451
  • Year to date:
    • Site-wide: 31,106 out of 57,822
  • Since beginning of last month:
    • Site-wide: 33,678 out of 57,822

Quantifying transport in crowded biochemical environments

biophysics more details view paper
  • Downloaded 443 times
  • Download rankings, all-time:
    • Site-wide: 20,294 out of 57,822
    • In biophysics: 724 out of 2,451
  • Year to date:
    • Site-wide: 56,408 out of 57,822
  • Since beginning of last month:
    • Site-wide: 50,946 out of 57,822

Stochastic simulation tools and continuum models for describing two-dimensional collective cell spreading with universal growth functions

biophysics more details view paper
  • Downloaded 425 times
  • Download rankings, all-time:
    • Site-wide: 21,292 out of 57,822
    • In biophysics: 771 out of 2,451
  • Year to date:
    • Site-wide: 47,766 out of 57,822
  • Since beginning of last month:
    • Site-wide: 52,027 out of 57,822

Co-operation, competition and crowding: a discrete framework linking Allee kinetics, nonlinear diffusion, shocks and sharp-fronted travelling waves

biophysics more details view paper
  • Downloaded 422 times
  • Download rankings, all-time:
    • Site-wide: 21,486 out of 57,822
    • In biophysics: 780 out of 2,451
  • Year to date:
    • Site-wide: 34,078 out of 57,822
  • Since beginning of last month:
    • Site-wide: 30,739 out of 57,822

A one-dimensional individual-based mechanical model of cell movement in heterogeneous tissues and its coarse-grained approximation

biophysics more details view paper
  • Downloaded 386 times
  • Download rankings, all-time:
    • Site-wide: 23,606 out of 57,822
    • In biophysics: 870 out of 2,451
  • Year to date:
    • Site-wide: 7,050 out of 57,822
  • Since beginning of last month:
    • Site-wide: 5,255 out of 57,822

Using experimental data and information criteria to guide model selection for reaction--diffusion problems in mathematical biology

biophysics more details view paper
  • Downloaded 356 times
  • Download rankings, all-time:
    • Site-wide: 25,665 out of 57,822
    • In biophysics: 967 out of 2,451
  • Year to date:
    • Site-wide: 20,746 out of 57,822
  • Since beginning of last month:
    • Site-wide: 17,628 out of 57,822

Exact solutions of coupled multispecies linear reaction-diffusion equations on a uniformly growing domain

biophysics more details view paper
  • Downloaded 317 times
  • Download rankings, all-time:
    • Site-wide: 28,649 out of 57,822
    • In biophysics: 1,102 out of 2,451
  • Year to date:
    • Site-wide: 50,197 out of 57,822
  • Since beginning of last month:
    • Site-wide: 51,336 out of 57,822

Continuum approximations for lattice-free multi-species models of collective cell migration

biophysics more details view paper
  • Downloaded 305 times
  • Download rankings, all-time:
    • Site-wide: 29,597 out of 57,822
    • In biophysics: 1,146 out of 2,451
  • Year to date:
    • Site-wide: 50,798 out of 57,822
  • Since beginning of last month:
    • Site-wide: 42,726 out of 57,822

Inferring parameters for a lattice-free model of cell migration and proliferation using experimental data

cell biology more details view paper
  • Downloaded 287 times
  • Download rankings, all-time:
    • Site-wide: 31,223 out of 57,822
    • In cell biology: 1,459 out of 2,743
  • Year to date:
    • Site-wide: 49,659 out of 57,822
  • Since beginning of last month:
    • Site-wide: 40,181 out of 57,822

Stochastic models of cell invasion with fluorescent cell cycle indicators

biophysics more details view paper
  • Downloaded 266 times
  • Download rankings, all-time:
    • Site-wide: 33,221 out of 57,822
    • In biophysics: 1,307 out of 2,451
  • Year to date:
    • Site-wide: 46,088 out of 57,822
  • Since beginning of last month:
    • Site-wide: 38,985 out of 57,822

Quantifying the efficacy of first aid treatments for burn injuries using mathematical modelling and in vivo porcine experiments

biophysics more details view paper
  • Downloaded 263 times
  • Download rankings, all-time:
    • Site-wide: 33,480 out of 57,822
    • In biophysics: 1,332 out of 2,451
  • Year to date:
    • Site-wide: 53,265 out of 57,822
  • Since beginning of last month:
    • Site-wide: 49,444 out of 57,822

A computational modelling framework to quantify the effects of passaging cell lines

biophysics more details view paper
  • Downloaded 236 times
  • Download rankings, all-time:
    • Site-wide: 36,244 out of 57,822
    • In biophysics: 1,470 out of 2,451
  • Year to date:
    • Site-wide: 56,493 out of 57,822
  • Since beginning of last month:
    • Site-wide: 56,142 out of 57,822

A Bayesian computational approach to explore the optimal duration of a cell proliferation assay

biophysics more details view paper
  • Downloaded 223 times
  • Download rankings, all-time:
    • Site-wide: 37,646 out of 57,822
    • In biophysics: 1,544 out of 2,451
  • Year to date:
    • Site-wide: 53,842 out of 57,822
  • Since beginning of last month:
    • Site-wide: 42,417 out of 57,822

Discrete and continuum approximations for collective cell migration in a scratch assay with cell size dynamics

biophysics more details view paper
  • Downloaded 221 times
  • Download rankings, all-time:
    • Site-wide: 37,852 out of 57,822
    • In biophysics: 1,554 out of 2,451
  • Year to date:
    • Site-wide: 43,021 out of 57,822
  • Since beginning of last month:
    • Site-wide: 45,068 out of 57,822

Parameterising continuum models of heat transfer in heterogeneous living skin using experimental data

biophysics more details view paper
  • Downloaded 204 times
  • Download rankings, all-time:
    • Site-wide: 39,865 out of 57,822
    • In biophysics: 1,657 out of 2,451
  • Year to date:
    • Site-wide: 43,616 out of 57,822
  • Since beginning of last month:
    • Site-wide: 31,859 out of 57,822

Revisiting the Fisher-KPP equation to interpret the spreading-extinction dichotomy

biophysics more details view paper
  • Downloaded 172 times
  • Download rankings, all-time:
    • Site-wide: 43,716 out of 57,822
    • In biophysics: 1,849 out of 2,451
  • Year to date:
    • Site-wide: 18,673 out of 57,822
  • Since beginning of last month:
    • Site-wide: 9,312 out of 57,822

A free boundary model of epithelial dynamics

systems biology more details view paper
  • Downloaded 162 times
  • Download rankings, all-time:
    • Site-wide: 44,920 out of 57,822
    • In systems biology: 1,400 out of 1,638
  • Year to date:
    • Site-wide: 41,913 out of 57,822
  • Since beginning of last month:
    • Site-wide: 54,341 out of 57,822

Accurate and efficient discretisations for stochastic models of cell migration and cell proliferation with crowding

biophysics more details view paper
  • Downloaded 159 times
  • Download rankings, all-time:
    • Site-wide: 45,250 out of 57,822
    • In biophysics: 1,929 out of 2,451
  • Year to date:
    • Site-wide: 20,449 out of 57,822
  • Since beginning of last month:
    • Site-wide: 3,372 out of 57,822

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