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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 65,094 bioRxiv papers from 288,491 authors.

Author: David Koslicki

Rankings

  • All-time downloads: 17,005 (rank: 1,697 out of 288,491)
  • Categories:
    • bioinformatics: 12,563 (rank: 194 out of 25,173)
    • ecology: 249 (rank: 6,812 (tie) out of 11,453)
    • microbiology: 3,875 (rank: 295 out of 29,632)
    • systems biology: 318 (rank: 5,659 (tie) out of 8,748)

Downloads per author, site-wide

Preprints

Critical Assessment of Metagenome Interpretation − a benchmark of computational metagenomics software

bioinformatics more details view paper
  • Downloaded 6,519 times
  • Download rankings, all-time:
    • Site-wide: 264 out of 65,094
    • In bioinformatics: 44 out of 6,446
  • Year to date:
    • Site-wide: 7,090 out of 65,094
  • Since beginning of last month:
    • Site-wide: 14,060 out of 65,094

Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia

microbiology more details view paper
  • Downloaded 3,431 times
  • Download rankings, all-time:
    • Site-wide: 875 out of 65,094
    • In microbiology: 16 out of 5,226
  • Year to date:
    • Site-wide: 6,226 out of 65,094
  • Since beginning of last month:
    • Site-wide: 9,951 out of 65,094

Improving Min Hash via the Containment Index with applications to Metagenomic Analysis

bioinformatics more details view paper
  • Downloaded 1,782 times
  • Download rankings, all-time:
    • Site-wide: 2,842 out of 65,094
    • In bioinformatics: 578 out of 6,446
  • Year to date:
    • Site-wide: 6,228 out of 65,094
  • Since beginning of last month:
    • Site-wide: 9,960 out of 65,094

MiCoP: Microbial Community Profiling method for detecting viral and fungal organisms in metagenomic samples

bioinformatics more details view paper
  • Downloaded 1,263 times
  • Download rankings, all-time:
    • Site-wide: 5,047 out of 65,094
    • In bioinformatics: 981 out of 6,446
  • Year to date:
    • Site-wide: 11,526 out of 65,094
  • Since beginning of last month:
    • Site-wide: 39,434 out of 65,094

MetaPalette: A K-mer painting approach for metagenomic taxonomic profiling and quantification of novel strain variation

bioinformatics more details view paper
  • Downloaded 1,191 times
  • Download rankings, all-time:
    • Site-wide: 5,574 out of 65,094
    • In bioinformatics: 1,067 out of 6,446
  • Year to date:
    • Site-wide: 49,198 out of 65,094
  • Since beginning of last month:
    • Site-wide: 60,518 out of 65,094

Reference-free comparison of microbial communities via de Bruijn graphs

bioinformatics more details view paper
  • Downloaded 689 times
  • Download rankings, all-time:
    • Site-wide: 13,159 out of 65,094
    • In bioinformatics: 2,149 out of 6,446
  • Year to date:
    • Site-wide: 46,769 out of 65,094
  • Since beginning of last month:
    • Site-wide: 33,868 out of 65,094

Improving the usability and comprehensiveness of microbial databases

bioinformatics more details view paper
  • Downloaded 448 times
  • Download rankings, all-time:
    • Site-wide: 23,102 out of 65,094
    • In bioinformatics: 3,267 out of 6,446
  • Year to date:
    • Site-wide: 9,118 out of 65,094
  • Since beginning of last month:
    • Site-wide: 17,940 out of 65,094

EMDUnifrac: Exact linear time computation of the Unifrac metric and identification of differentially abundant organisms

microbiology more details view paper
  • Downloaded 444 times
  • Download rankings, all-time:
    • Site-wide: 23,352 out of 65,094
    • In microbiology: 1,288 out of 5,226
  • Year to date:
    • Site-wide: 53,615 out of 65,094
  • Since beginning of last month:
    • Site-wide: 56,000 out of 65,094

Assessing taxonomic metagenome profilers with OPAL

bioinformatics more details view paper
  • Downloaded 351 times
  • Download rankings, all-time:
    • Site-wide: 30,013 out of 65,094
    • In bioinformatics: 3,926 out of 6,446
  • Year to date:
    • Site-wide: 32,921 out of 65,094
  • Since beginning of last month:
    • Site-wide: 53,074 out of 65,094

Leveraging Distributed Biomedical Knowledge Sources to Discover Novel Uses for Known Drugs

bioinformatics more details view paper
  • Downloaded 320 times
  • Download rankings, all-time:
    • Site-wide: 32,786 out of 65,094
    • In bioinformatics: 4,143 out of 6,446
  • Year to date:
    • Site-wide: 11,934 out of 65,094
  • Since beginning of last month:
    • Site-wide: 9,182 out of 65,094

IndeCut evaluates performance of network motif discovery algorithms

systems biology more details view paper
  • Downloaded 318 times
  • Download rankings, all-time:
    • Site-wide: 33,003 out of 65,094
    • In systems biology: 1,029 out of 1,833
  • Year to date:
    • Site-wide: 45,692 out of 65,094
  • Since beginning of last month:
    • Site-wide: 34,309 out of 65,094

Exact probabilities for the indeterminacy of complex networks as perceived through press perturbations

ecology more details view paper
  • Downloaded 249 times
  • Download rankings, all-time:
    • Site-wide: 40,210 out of 65,094
    • In ecology: 1,396 out of 2,781
  • Year to date:
    • Site-wide: 62,180 out of 65,094
  • Since beginning of last month:
    • Site-wide: 58,843 out of 65,094

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