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Author: Simon J. van Heeringen

Rankings

  • All-time downloads: 9,872 (rank: 8,030 out of 383,599)
  • Categories:
    • bioinformatics: 8,201 (rank: 761 out of 32,826)
    • developmental biology: 657 (rank: 4,420 (tie) out of 14,859)
    • evolutionary biology: 415 (rank: 11,719 (tie) out of 19,647)
    • systems biology: 599 (rank: 5,223 (tie) out of 11,273)

Downloads per author, site-wide

Preprints

Bioconda: A sustainable and comprehensive software distribution for the life sciences

bioinformatics more details view paper
  • Downloaded 5,219 times
  • Download rankings, all-time:
    • Site-wide: 696 out of 89,532
    • In bioinformatics: 116 out of 8,443
  • Year to date:
    • Site-wide: 3,687 out of 89,532
  • Since beginning of last month:
    • Site-wide: 5,415 out of 89,532

fluff: exploratory analysis and visualization of high-throughput sequencing data

bioinformatics more details view paper
  • Downloaded 1,397 times
  • Download rankings, all-time:
    • Site-wide: 6,615 out of 89,532
    • In bioinformatics: 1,171 out of 8,443
  • Year to date:
    • Site-wide: 67,688 out of 89,532
  • Since beginning of last month:
    • Site-wide: 65,153 out of 89,532

GimmeMotifs: an analysis framework for transcription factor motif analysis

bioinformatics more details view paper
  • Downloaded 1,365 times
  • Download rankings, all-time:
    • Site-wide: 6,886 out of 89,532
    • In bioinformatics: 1,218 out of 8,443
  • Year to date:
    • Site-wide: 3,606 out of 89,532
  • Since beginning of last month:
    • Site-wide: 5,951 out of 89,532

ANANSE: An enhancer network-based computational approach for predicting key transcription factors in cell fate determination

systems biology more details view paper
  • Downloaded 599 times
  • Download rankings, all-time:
    • Site-wide: 24,925 out of 89,532
    • In systems biology: 720 out of 2,311
  • Year to date:
    • Site-wide: 3,098 out of 89,532
  • Since beginning of last month:
    • Site-wide: 366 out of 89,532

Regulatory remodeling in the allo-tetraploid frog Xenopus laevis

evolutionary biology more details view paper
  • Downloaded 415 times
  • Download rankings, all-time:
    • Site-wide: 39,127 out of 89,532
    • In evolutionary biology: 2,676 out of 5,474
  • Year to date:
    • Site-wide: 82,741 out of 89,532
  • Since beginning of last month:
    • Site-wide: 81,957 out of 89,532

Combinatorial action of transcription factors in open chromatin contributes to early cellular heterogeneity and organizer mesendoderm specification.

developmental biology more details view paper
  • Downloaded 368 times
  • Download rankings, all-time:
    • Site-wide: 44,373 out of 89,532
    • In developmental biology: 1,321 out of 2,664
  • Year to date:
    • Site-wide: 6,523 out of 89,532
  • Since beginning of last month:
    • Site-wide: 37,873 out of 89,532

Wdr5, Brca1 and Bard1 link the DNA damage response to the mesenchymal-to-epithelial transition during early reprogramming.

developmental biology more details view paper
  • Downloaded 289 times
  • Download rankings, all-time:
    • Site-wide: 55,054 out of 89,532
    • In developmental biology: 1,694 out of 2,664
  • Year to date:
    • Site-wide: 70,257 out of 89,532
  • Since beginning of last month:
    • Site-wide: 83,974 out of 89,532

Bayesian Linear Mixed Models for Motif Activity Analysis

bioinformatics more details view paper
  • Downloaded 220 times
  • Download rankings, all-time:
    • Site-wide: 66,168 out of 89,532
    • In bioinformatics: 6,875 out of 8,443
  • Year to date:
    • Site-wide: 60,585 out of 89,532
  • Since beginning of last month:
    • Site-wide: 75,911 out of 89,532

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