Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 65,403 bioRxiv papers from 289,694 authors.

Downloads per author, site-wide

Preprints

The Human Cell Atlas

• Downloaded 11,746 times
• Download rankings, all-time:
  • Site-wide: 81 out of 65,403
  • In cell biology: 3 out of 3,152
• Year to date:
  • Site-wide: 4,954 out of 65,403
• Since beginning of last month:
  • Site-wide: 7,166 out of 65,403

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

• Downloaded 2,296 times
• Download rankings, all-time:
  • Site-wide: 1,848 out of 65,403
  • In genomics: 405 out of 4,463
• Year to date:
  • Site-wide: 46,730 out of 65,403
• Since beginning of last month:
  • Site-wide: 17,521 out of 65,403

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

• Downloaded 2,270 times
• Download rankings, all-time:
  • Site-wide: 1,886 out of 65,403
  • In genomics: 411 out of 4,463
• Year to date:
  • Site-wide: 5,324 out of 65,403
• Since beginning of last month:
  • Site-wide: 21,859 out of 65,403

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

• Downloaded 1,996 times
• Download rankings, all-time:
  • Site-wide: 2,378 out of 65,403
  • In genomics: 496 out of 4,463
• Year to date:
  • Site-wide: 45,264 out of 65,403
• Since beginning of last month:
  • Site-wide: 26,125 out of 65,403

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

• Downloaded 1,927 times
• Download rankings, all-time:
  • Site-wide: 2,507 out of 65,403
  • In genomics: 519 out of 4,463
• Year to date:
  • Site-wide: 6,050 out of 65,403
• Since beginning of last month:
  • Site-wide: 7,445 out of 65,403

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

• Downloaded 1,496 times
• Download rankings, all-time:
  • Site-wide: 3,837 out of 65,403
  • In genomics: 709 out of 4,463
• Year to date:
  • Site-wide: 4,478 out of 65,403
• Since beginning of last month:
  • Site-wide: 17,340 out of 65,403

The landscape of viral associations in human cancers

• Downloaded 1,431 times
• Download rankings, all-time:
  • Site-wide: 4,146 out of 65,403
  • In cancer biology: 104 out of 2,182
• Year to date:
  • Site-wide: 1,733 out of 65,403
• Since beginning of last month:
  • Site-wide: 1,433 out of 65,403

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

• Downloaded 1,264 times
• Download rankings, all-time:
  • Site-wide: 5,061 out of 65,403
  • In genomics: 885 out of 4,463
• Year to date:
  • Site-wide: 14,787 out of 65,403
• Since beginning of last month:
  • Site-wide: 10,301 out of 65,403

Genomic footprints of activated telomere maintenance mechanisms in cancer

• Downloaded 1,150 times
• Download rankings, all-time:
  • Site-wide: 5,959 out of 65,403
  • In genomics: 997 out of 4,463
• Year to date:
  • Site-wide: 10,137 out of 65,403
• Since beginning of last month:
  • Site-wide: 18,845 out of 65,403

Single nucleus RNA sequencing maps acinar cell states in a human pancreas cell atlas

• Downloaded 1,020 times
• Download rankings, all-time:
  • Site-wide: 7,244 out of 65,403
  • In genomics: 1,170 out of 4,463
• Year to date:
  • Site-wide: 1,694 out of 65,403
• Since beginning of last month:
  • Site-wide: 991 out of 65,403

ACEseq - allele specific copy number estimation from whole genome sequencing

• Downloaded 980 times
• Download rankings, all-time:
  • Site-wide: 7,711 out of 65,403
  • In bioinformatics: 1,371 out of 6,484
• Year to date:
  • Site-wide: 16,400 out of 65,403
• Since beginning of last month:
  • Site-wide: 16,888 out of 65,403

Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics

• Downloaded 922 times
• Download rankings, all-time:
  • Site-wide: 8,543 out of 65,403
  • In cancer biology: 232 out of 2,182
• Year to date:
  • Site-wide: 2,027 out of 65,403
• Since beginning of last month:
  • Site-wide: 2,320 out of 65,403

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

• Downloaded 884 times
• Download rankings, all-time:
  • Site-wide: 9,096 out of 65,403
  • In genomics: 1,378 out of 4,463
• Year to date:
  • Site-wide: 27,316 out of 65,403
• Since beginning of last month:
  • Site-wide: 27,044 out of 65,403

Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations

• Downloaded 794 times
• Download rankings, all-time:
  • Site-wide: 10,719 out of 65,403
  • In cancer biology: 306 out of 2,182
• Year to date:
  • Site-wide: 48,803 out of 65,403
• Since beginning of last month:
  • Site-wide: 43,910 out of 65,403

Segmentation-free inference of cell-types from in situ transcriptomics data

• Downloaded 772 times
• Download rankings, all-time:
  • Site-wide: 11,201 out of 65,403
  • In bioinformatics: 1,884 out of 6,484
• Year to date:
  • Site-wide: 2,740 out of 65,403
• Since beginning of last month:
  • Site-wide: 128 out of 65,403

Web-based design and analysis tools for CRISPR base editing

• Downloaded 704 times
• Download rankings, all-time:
  • Site-wide: 12,825 out of 65,403
  • In bioinformatics: 2,100 out of 6,484
• Year to date:
  • Site-wide: 15,771 out of 65,403
• Since beginning of last month:
  • Site-wide: 40,627 out of 65,403

Cell-specific CRISPR/Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins

• Downloaded 698 times
• Download rankings, all-time:
  • Site-wide: 12,969 out of 65,403
  • In synthetic biology: 213 out of 620
• Year to date:
  • Site-wide: 7,634 out of 65,403
• Since beginning of last month:
  • Site-wide: 20,934 out of 65,403

Identification and prioritisation of causal variants in human genetic disorders from exome or whole genome sequencing data

• Downloaded 547 times
• Download rankings, all-time:
  • Site-wide: 18,173 out of 65,403
  • In bioinformatics: 2,740 out of 6,484
• Year to date:
  • Site-wide: 33,379 out of 65,403
• Since beginning of last month:
  • Site-wide: 54,299 out of 65,403

Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders

• Downloaded 518 times
• Download rankings, all-time:
  • Site-wide: 19,475 out of 65,403
  • In bioinformatics: 2,886 out of 6,484
• Year to date:
  • Site-wide: 5,482 out of 65,403
• Since beginning of last month:
  • Site-wide: 4,061 out of 65,403

Impact of cancer mutational signatures on transcription factor motifs in the human genome

• Downloaded 508 times
• Download rankings, all-time:
  • Site-wide: 19,977 out of 65,403
  • In bioinformatics: 2,945 out of 6,484
• Year to date:
  • Site-wide: 27,890 out of 65,403
• Since beginning of last month:
  • Site-wide: 44,199 out of 65,403

Single-fluorescent protein reporters allow parallel quantification of NK cell-mediated granzyme and caspase activities in single target cells

• Downloaded 468 times
• Download rankings, all-time:
  • Site-wide: 21,989 out of 65,403
  • In immunology: 403 out of 1,661
• Year to date:
  • Site-wide: 19,632 out of 65,403
• Since beginning of last month:
  • Site-wide: 16,021 out of 65,403

Computational design of anti-CRISPR proteins with improved inhibition potency and expanded specificity

• Downloaded 434 times
• Download rankings, all-time:
  • Site-wide: 23,996 out of 65,403
  • In synthetic biology: 372 out of 620
• Year to date:
  • Site-wide: 7,328 out of 65,403
• Since beginning of last month:
  • Site-wide: 13,054 out of 65,403

Unraveling mitotic protein networks by 3D multiplexed epitope drug screening

• Downloaded 263 times
• Download rankings, all-time:
  • Site-wide: 38,784 out of 65,403
  • In systems biology: 1,216 out of 1,836
• Year to date:
  • Site-wide: 56,807 out of 65,403
• Since beginning of last month:
  • Site-wide: 45,616 out of 65,403

HTSlib-js: Developer toolkit for a client-side JavaScript interface for HTSlib

• Downloaded 257 times
• Download rankings, all-time:
  • Site-wide: 39,465 out of 65,403
  • In bioinformatics: 4,706 out of 6,484
• Year to date:
  • Site-wide: 41,387 out of 65,403
• Since beginning of last month:
  • Site-wide: 38,521 out of 65,403

Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4

• Downloaded 183 times
• Download rankings, all-time:
  • Site-wide: 48,785 out of 65,403
  • In genomics: 3,894 out of 4,463
• Year to date:
  • Site-wide: 25,647 out of 65,403
• Since beginning of last month:
  • Site-wide: 30,000 out of 65,403