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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 60,222 bioRxiv papers from 267,721 authors.

Author: Roland Eils

Rankings

  • All-time downloads: 32,701 (rank: 497 out of 267,721)
  • Categories:
    • bioinformatics: 3,278 (rank: 1,916 out of 23,843)
    • cancer biology: 2,274 (rank: 738 out of 16,249)
    • cell biology: 11,645 (rank: 47 (tie) out of 17,570)
    • genomics: 13,782 (rank: 564 out of 31,247)
    • immunology: 428 (rank: 4,075 (tie) out of 11,863)
    • synthetic biology: 1,045 (rank: 664 (tie) out of 2,644)
    • systems biology: 249 (rank: 6,045 (tie) out of 8,141)

Downloads per author, site-wide

Preprints

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 11,645 times
  • Download rankings, all-time:
    • Site-wide: 77 out of 60,222
    • In cell biology: 2 out of 2,865
  • Year to date:
    • Site-wide: 5,107 out of 60,222
  • Since beginning of last month:
    • Site-wide: 7,992 out of 60,222

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,264 times
  • Download rankings, all-time:
    • Site-wide: 1,725 out of 60,222
    • In genomics: 383 out of 4,168
  • Year to date:
    • Site-wide: 49,127 out of 60,222
  • Since beginning of last month:
    • Site-wide: 51,118 out of 60,222

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

genomics more details view paper
  • Downloaded 2,236 times
  • Download rankings, all-time:
    • Site-wide: 1,756 out of 60,222
    • In genomics: 392 out of 4,168
  • Year to date:
    • Site-wide: 4,392 out of 60,222
  • Since beginning of last month:
    • Site-wide: 13,028 out of 60,222

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 1,973 times
  • Download rankings, all-time:
    • Site-wide: 2,211 out of 60,222
    • In genomics: 473 out of 4,168
  • Year to date:
    • Site-wide: 43,952 out of 60,222
  • Since beginning of last month:
    • Site-wide: 38,801 out of 60,222

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 1,838 times
  • Download rankings, all-time:
    • Site-wide: 2,483 out of 60,222
    • In genomics: 511 out of 4,168
  • Year to date:
    • Site-wide: 6,203 out of 60,222
  • Since beginning of last month:
    • Site-wide: 17,011 out of 60,222

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

genomics more details view paper
  • Downloaded 1,454 times
  • Download rankings, all-time:
    • Site-wide: 3,685 out of 60,222
    • In genomics: 689 out of 4,168
  • Year to date:
    • Site-wide: 3,766 out of 60,222
  • Since beginning of last month:
    • Site-wide: 8,318 out of 60,222

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

genomics more details view paper
  • Downloaded 1,190 times
  • Download rankings, all-time:
    • Site-wide: 5,096 out of 60,222
    • In genomics: 877 out of 4,168
  • Year to date:
    • Site-wide: 17,340 out of 60,222
  • Since beginning of last month:
    • Site-wide: 22,515 out of 60,222

Genomic footprints of activated telomere maintenance mechanisms in cancer

genomics more details view paper
  • Downloaded 1,093 times
  • Download rankings, all-time:
    • Site-wide: 5,908 out of 60,222
    • In genomics: 989 out of 4,168
  • Year to date:
    • Site-wide: 9,882 out of 60,222
  • Since beginning of last month:
    • Site-wide: 14,902 out of 60,222

ACEseq - allele specific copy number estimation from whole genome sequencing

bioinformatics more details view paper
  • Downloaded 939 times
  • Download rankings, all-time:
    • Site-wide: 7,514 out of 60,222
    • In bioinformatics: 1,350 out of 6,078
  • Year to date:
    • Site-wide: 15,861 out of 60,222
  • Since beginning of last month:
    • Site-wide: 16,972 out of 60,222

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 857 times
  • Download rankings, all-time:
    • Site-wide: 8,694 out of 60,222
    • In genomics: 1,331 out of 4,168
  • Year to date:
    • Site-wide: 25,603 out of 60,222
  • Since beginning of last month:
    • Site-wide: 28,220 out of 60,222

Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations

cancer biology more details view paper
  • Downloaded 781 times
  • Download rankings, all-time:
    • Site-wide: 10,024 out of 60,222
    • In cancer biology: 281 out of 1,975
  • Year to date:
    • Site-wide: 44,155 out of 60,222
  • Since beginning of last month:
    • Site-wide: 47,480 out of 60,222

The landscape of viral associations in human cancers

cancer biology more details view paper
  • Downloaded 772 times
  • Download rankings, all-time:
    • Site-wide: 10,193 out of 60,222
    • In cancer biology: 284 out of 1,975
  • Year to date:
    • Site-wide: 7,862 out of 60,222
  • Since beginning of last month:
    • Site-wide: None out of 60,222

Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics

cancer biology more details view paper
  • Downloaded 721 times
  • Download rankings, all-time:
    • Site-wide: 11,207 out of 60,222
    • In cancer biology: 322 out of 1,975
  • Year to date:
    • Site-wide: 2,268 out of 60,222
  • Since beginning of last month:
    • Site-wide: 1,383 out of 60,222

Single nucleus RNA sequencing maps acinar cell states in a human pancreas cell atlas

genomics more details view paper
  • Downloaded 717 times
  • Download rankings, all-time:
    • Site-wide: 11,315 out of 60,222
    • In genomics: 1,604 out of 4,168
  • Year to date:
    • Site-wide: 2,297 out of 60,222
  • Since beginning of last month:
    • Site-wide: 117 out of 60,222

Web-based design and analysis tools for CRISPR base editing

bioinformatics more details view paper
  • Downloaded 690 times
  • Download rankings, all-time:
    • Site-wide: 11,983 out of 60,222
    • In bioinformatics: 1,993 out of 6,078
  • Year to date:
    • Site-wide: 12,918 out of 60,222
  • Since beginning of last month:
    • Site-wide: 28,904 out of 60,222

Cell-specific CRISPR/Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins

synthetic biology more details view paper
  • Downloaded 665 times
  • Download rankings, all-time:
    • Site-wide: 12,609 out of 60,222
    • In synthetic biology: 200 out of 575
  • Year to date:
    • Site-wide: 6,398 out of 60,222
  • Since beginning of last month:
    • Site-wide: 20,932 out of 60,222

Identification and prioritisation of causal variants in human genetic disorders from exome or whole genome sequencing data

bioinformatics more details view paper
  • Downloaded 532 times
  • Download rankings, all-time:
    • Site-wide: 17,051 out of 60,222
    • In bioinformatics: 2,607 out of 6,078
  • Year to date:
    • Site-wide: 29,309 out of 60,222
  • Since beginning of last month:
    • Site-wide: 55,263 out of 60,222

Impact of cancer mutational signatures on transcription factor motifs in the human genome

bioinformatics more details view paper
  • Downloaded 494 times
  • Download rankings, all-time:
    • Site-wide: 18,704 out of 60,222
    • In bioinformatics: 2,788 out of 6,078
  • Year to date:
    • Site-wide: 23,758 out of 60,222
  • Since beginning of last month:
    • Site-wide: 36,038 out of 60,222

Single-fluorescent protein reporters allow parallel quantification of NK cell-mediated granzyme and caspase activities in single target cells

immunology more details view paper
  • Downloaded 428 times
  • Download rankings, all-time:
    • Site-wide: 22,108 out of 60,222
    • In immunology: 386 out of 1,466
  • Year to date:
    • Site-wide: 19,381 out of 60,222
  • Since beginning of last month:
    • Site-wide: 10,822 out of 60,222

Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders

bioinformatics more details view paper
  • Downloaded 383 times
  • Download rankings, all-time:
    • Site-wide: 24,946 out of 60,222
    • In bioinformatics: 3,453 out of 6,078
  • Year to date:
    • Site-wide: 6,658 out of 60,222
  • Since beginning of last month:
    • Site-wide: 368 out of 60,222

Computational design of anti-CRISPR proteins with improved inhibition potency and expanded specificity

synthetic biology more details view paper
  • Downloaded 380 times
  • Download rankings, all-time:
    • Site-wide: 25,115 out of 60,222
    • In synthetic biology: 383 out of 575
  • Year to date:
    • Site-wide: 6,733 out of 60,222
  • Since beginning of last month:
    • Site-wide: 6,054 out of 60,222

Unraveling mitotic protein networks by 3D multiplexed epitope drug screening

systems biology more details view paper
  • Downloaded 249 times
  • Download rankings, all-time:
    • Site-wide: 36,613 out of 60,222
    • In systems biology: 1,143 out of 1,707
  • Year to date:
    • Site-wide: 52,959 out of 60,222
  • Since beginning of last month:
    • Site-wide: 55,853 out of 60,222

HTSlib-js: Developer toolkit for a client-side JavaScript interface for HTSlib

bioinformatics more details view paper
  • Downloaded 240 times
  • Download rankings, all-time:
    • Site-wide: 37,574 out of 60,222
    • In bioinformatics: 4,548 out of 6,078
  • Year to date:
    • Site-wide: 37,913 out of 60,222
  • Since beginning of last month:
    • Site-wide: 39,429 out of 60,222

Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4

genomics more details view paper
  • Downloaded 160 times
  • Download rankings, all-time:
    • Site-wide: 47,346 out of 60,222
    • In genomics: 3,746 out of 4,168
  • Year to date:
    • Site-wide: 23,261 out of 60,222
  • Since beginning of last month:
    • Site-wide: 25,715 out of 60,222

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