Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 60,222 bioRxiv papers from 267,721 authors.

Downloads per author, site-wide

Preprints

The Human Cell Atlas

• Downloaded 11,645 times
• Download rankings, all-time:
  • Site-wide: 77 out of 60,222
  • In cell biology: 2 out of 2,865
• Year to date:
  • Site-wide: 5,107 out of 60,222
• Since beginning of last month:
  • Site-wide: 7,992 out of 60,222

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

• Downloaded 2,264 times
• Download rankings, all-time:
  • Site-wide: 1,725 out of 60,222
  • In genomics: 383 out of 4,168
• Year to date:
  • Site-wide: 49,127 out of 60,222
• Since beginning of last month:
  • Site-wide: 51,118 out of 60,222

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

• Downloaded 2,236 times
• Download rankings, all-time:
  • Site-wide: 1,756 out of 60,222
  • In genomics: 392 out of 4,168
• Year to date:
  • Site-wide: 4,392 out of 60,222
• Since beginning of last month:
  • Site-wide: 13,028 out of 60,222

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

• Downloaded 1,973 times
• Download rankings, all-time:
  • Site-wide: 2,211 out of 60,222
  • In genomics: 473 out of 4,168
• Year to date:
  • Site-wide: 43,952 out of 60,222
• Since beginning of last month:
  • Site-wide: 38,801 out of 60,222

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

• Downloaded 1,838 times
• Download rankings, all-time:
  • Site-wide: 2,483 out of 60,222
  • In genomics: 511 out of 4,168
• Year to date:
  • Site-wide: 6,203 out of 60,222
• Since beginning of last month:
  • Site-wide: 17,011 out of 60,222

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

• Downloaded 1,454 times
• Download rankings, all-time:
  • Site-wide: 3,685 out of 60,222
  • In genomics: 689 out of 4,168
• Year to date:
  • Site-wide: 3,766 out of 60,222
• Since beginning of last month:
  • Site-wide: 8,318 out of 60,222

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

• Downloaded 1,190 times
• Download rankings, all-time:
  • Site-wide: 5,096 out of 60,222
  • In genomics: 877 out of 4,168
• Year to date:
  • Site-wide: 17,340 out of 60,222
• Since beginning of last month:
  • Site-wide: 22,515 out of 60,222

Genomic footprints of activated telomere maintenance mechanisms in cancer

• Downloaded 1,093 times
• Download rankings, all-time:
  • Site-wide: 5,908 out of 60,222
  • In genomics: 989 out of 4,168
• Year to date:
  • Site-wide: 9,882 out of 60,222
• Since beginning of last month:
  • Site-wide: 14,902 out of 60,222

ACEseq - allele specific copy number estimation from whole genome sequencing

• Downloaded 939 times
• Download rankings, all-time:
  • Site-wide: 7,514 out of 60,222
  • In bioinformatics: 1,350 out of 6,078
• Year to date:
  • Site-wide: 15,861 out of 60,222
• Since beginning of last month:
  • Site-wide: 16,972 out of 60,222

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

• Downloaded 857 times
• Download rankings, all-time:
  • Site-wide: 8,694 out of 60,222
  • In genomics: 1,331 out of 4,168
• Year to date:
  • Site-wide: 25,603 out of 60,222
• Since beginning of last month:
  • Site-wide: 28,220 out of 60,222

Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations

• Downloaded 781 times
• Download rankings, all-time:
  • Site-wide: 10,024 out of 60,222
  • In cancer biology: 281 out of 1,975
• Year to date:
  • Site-wide: 44,155 out of 60,222
• Since beginning of last month:
  • Site-wide: 47,480 out of 60,222

The landscape of viral associations in human cancers

• Downloaded 772 times
• Download rankings, all-time:
  • Site-wide: 10,193 out of 60,222
  • In cancer biology: 284 out of 1,975
• Year to date:
  • Site-wide: 7,862 out of 60,222
• Since beginning of last month:
  • Site-wide: None out of 60,222

Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics

• Downloaded 721 times
• Download rankings, all-time:
  • Site-wide: 11,207 out of 60,222
  • In cancer biology: 322 out of 1,975
• Year to date:
  • Site-wide: 2,268 out of 60,222
• Since beginning of last month:
  • Site-wide: 1,383 out of 60,222

Single nucleus RNA sequencing maps acinar cell states in a human pancreas cell atlas

• Downloaded 717 times
• Download rankings, all-time:
  • Site-wide: 11,315 out of 60,222
  • In genomics: 1,604 out of 4,168
• Year to date:
  • Site-wide: 2,297 out of 60,222
• Since beginning of last month:
  • Site-wide: 117 out of 60,222

Web-based design and analysis tools for CRISPR base editing

• Downloaded 690 times
• Download rankings, all-time:
  • Site-wide: 11,983 out of 60,222
  • In bioinformatics: 1,993 out of 6,078
• Year to date:
  • Site-wide: 12,918 out of 60,222
• Since beginning of last month:
  • Site-wide: 28,904 out of 60,222

Cell-specific CRISPR/Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins

• Downloaded 665 times
• Download rankings, all-time:
  • Site-wide: 12,609 out of 60,222
  • In synthetic biology: 200 out of 575
• Year to date:
  • Site-wide: 6,398 out of 60,222
• Since beginning of last month:
  • Site-wide: 20,932 out of 60,222

Identification and prioritisation of causal variants in human genetic disorders from exome or whole genome sequencing data

• Downloaded 532 times
• Download rankings, all-time:
  • Site-wide: 17,051 out of 60,222
  • In bioinformatics: 2,607 out of 6,078
• Year to date:
  • Site-wide: 29,309 out of 60,222
• Since beginning of last month:
  • Site-wide: 55,263 out of 60,222

Impact of cancer mutational signatures on transcription factor motifs in the human genome

• Downloaded 494 times
• Download rankings, all-time:
  • Site-wide: 18,704 out of 60,222
  • In bioinformatics: 2,788 out of 6,078
• Year to date:
  • Site-wide: 23,758 out of 60,222
• Since beginning of last month:
  • Site-wide: 36,038 out of 60,222

Single-fluorescent protein reporters allow parallel quantification of NK cell-mediated granzyme and caspase activities in single target cells

• Downloaded 428 times
• Download rankings, all-time:
  • Site-wide: 22,108 out of 60,222
  • In immunology: 386 out of 1,466
• Year to date:
  • Site-wide: 19,381 out of 60,222
• Since beginning of last month:
  • Site-wide: 10,822 out of 60,222

Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders

• Downloaded 383 times
• Download rankings, all-time:
  • Site-wide: 24,946 out of 60,222
  • In bioinformatics: 3,453 out of 6,078
• Year to date:
  • Site-wide: 6,658 out of 60,222
• Since beginning of last month:
  • Site-wide: 368 out of 60,222

Computational design of anti-CRISPR proteins with improved inhibition potency and expanded specificity

• Downloaded 380 times
• Download rankings, all-time:
  • Site-wide: 25,115 out of 60,222
  • In synthetic biology: 383 out of 575
• Year to date:
  • Site-wide: 6,733 out of 60,222
• Since beginning of last month:
  • Site-wide: 6,054 out of 60,222

Unraveling mitotic protein networks by 3D multiplexed epitope drug screening

• Downloaded 249 times
• Download rankings, all-time:
  • Site-wide: 36,613 out of 60,222
  • In systems biology: 1,143 out of 1,707
• Year to date:
  • Site-wide: 52,959 out of 60,222
• Since beginning of last month:
  • Site-wide: 55,853 out of 60,222

HTSlib-js: Developer toolkit for a client-side JavaScript interface for HTSlib

• Downloaded 240 times
• Download rankings, all-time:
  • Site-wide: 37,574 out of 60,222
  • In bioinformatics: 4,548 out of 6,078
• Year to date:
  • Site-wide: 37,913 out of 60,222
• Since beginning of last month:
  • Site-wide: 39,429 out of 60,222

Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4

• Downloaded 160 times
• Download rankings, all-time:
  • Site-wide: 47,346 out of 60,222
  • In genomics: 3,746 out of 4,168
• Year to date:
  • Site-wide: 23,261 out of 60,222
• Since beginning of last month:
  • Site-wide: 25,715 out of 60,222