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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 65,403 bioRxiv papers from 289,694 authors.

Author: Roland Eils

Rankings

  • All-time downloads: 35,528 (rank: 453 out of 289,694)
  • Categories:
    • bioinformatics: 4,286 (rank: 1,510 (tie) out of 25,220)
    • cancer biology: 3,147 (rank: 463 out of 18,052)
    • cell biology: 11,746 (rank: 69 (tie) out of 19,346)
    • genomics: 14,486 (rank: 560 out of 32,932)
    • immunology: 468 (rank: 4,314 (tie) out of 13,364)
    • synthetic biology: 1,132 (rank: 651 (tie) out of 2,860)
    • systems biology: 263 (rank: 6,492 (tie) out of 8,770)

Downloads per author, site-wide

Preprints

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 11,746 times
  • Download rankings, all-time:
    • Site-wide: 81 out of 65,403
    • In cell biology: 3 out of 3,152
  • Year to date:
    • Site-wide: 4,954 out of 65,403
  • Since beginning of last month:
    • Site-wide: 7,166 out of 65,403

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,296 times
  • Download rankings, all-time:
    • Site-wide: 1,848 out of 65,403
    • In genomics: 405 out of 4,463
  • Year to date:
    • Site-wide: 46,730 out of 65,403
  • Since beginning of last month:
    • Site-wide: 17,521 out of 65,403

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

genomics more details view paper
  • Downloaded 2,270 times
  • Download rankings, all-time:
    • Site-wide: 1,886 out of 65,403
    • In genomics: 411 out of 4,463
  • Year to date:
    • Site-wide: 5,324 out of 65,403
  • Since beginning of last month:
    • Site-wide: 21,859 out of 65,403

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 1,996 times
  • Download rankings, all-time:
    • Site-wide: 2,378 out of 65,403
    • In genomics: 496 out of 4,463
  • Year to date:
    • Site-wide: 45,264 out of 65,403
  • Since beginning of last month:
    • Site-wide: 26,125 out of 65,403

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 1,927 times
  • Download rankings, all-time:
    • Site-wide: 2,507 out of 65,403
    • In genomics: 519 out of 4,463
  • Year to date:
    • Site-wide: 6,050 out of 65,403
  • Since beginning of last month:
    • Site-wide: 7,445 out of 65,403

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

genomics more details view paper
  • Downloaded 1,496 times
  • Download rankings, all-time:
    • Site-wide: 3,837 out of 65,403
    • In genomics: 709 out of 4,463
  • Year to date:
    • Site-wide: 4,478 out of 65,403
  • Since beginning of last month:
    • Site-wide: 17,340 out of 65,403

The landscape of viral associations in human cancers

cancer biology more details view paper
  • Downloaded 1,431 times
  • Download rankings, all-time:
    • Site-wide: 4,146 out of 65,403
    • In cancer biology: 104 out of 2,182
  • Year to date:
    • Site-wide: 1,733 out of 65,403
  • Since beginning of last month:
    • Site-wide: 1,433 out of 65,403

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

genomics more details view paper
  • Downloaded 1,264 times
  • Download rankings, all-time:
    • Site-wide: 5,061 out of 65,403
    • In genomics: 885 out of 4,463
  • Year to date:
    • Site-wide: 14,787 out of 65,403
  • Since beginning of last month:
    • Site-wide: 10,301 out of 65,403

Genomic footprints of activated telomere maintenance mechanisms in cancer

genomics more details view paper
  • Downloaded 1,150 times
  • Download rankings, all-time:
    • Site-wide: 5,959 out of 65,403
    • In genomics: 997 out of 4,463
  • Year to date:
    • Site-wide: 10,137 out of 65,403
  • Since beginning of last month:
    • Site-wide: 18,845 out of 65,403

Single nucleus RNA sequencing maps acinar cell states in a human pancreas cell atlas

genomics more details view paper
  • Downloaded 1,020 times
  • Download rankings, all-time:
    • Site-wide: 7,244 out of 65,403
    • In genomics: 1,170 out of 4,463
  • Year to date:
    • Site-wide: 1,694 out of 65,403
  • Since beginning of last month:
    • Site-wide: 991 out of 65,403

ACEseq - allele specific copy number estimation from whole genome sequencing

bioinformatics more details view paper
  • Downloaded 980 times
  • Download rankings, all-time:
    • Site-wide: 7,711 out of 65,403
    • In bioinformatics: 1,371 out of 6,484
  • Year to date:
    • Site-wide: 16,400 out of 65,403
  • Since beginning of last month:
    • Site-wide: 16,888 out of 65,403

Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics

cancer biology more details view paper
  • Downloaded 922 times
  • Download rankings, all-time:
    • Site-wide: 8,543 out of 65,403
    • In cancer biology: 232 out of 2,182
  • Year to date:
    • Site-wide: 2,027 out of 65,403
  • Since beginning of last month:
    • Site-wide: 2,320 out of 65,403

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 884 times
  • Download rankings, all-time:
    • Site-wide: 9,096 out of 65,403
    • In genomics: 1,378 out of 4,463
  • Year to date:
    • Site-wide: 27,316 out of 65,403
  • Since beginning of last month:
    • Site-wide: 27,044 out of 65,403

Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations

cancer biology more details view paper
  • Downloaded 794 times
  • Download rankings, all-time:
    • Site-wide: 10,719 out of 65,403
    • In cancer biology: 306 out of 2,182
  • Year to date:
    • Site-wide: 48,803 out of 65,403
  • Since beginning of last month:
    • Site-wide: 43,910 out of 65,403

Segmentation-free inference of cell-types from in situ transcriptomics data

bioinformatics more details view paper
  • Downloaded 772 times
  • Download rankings, all-time:
    • Site-wide: 11,201 out of 65,403
    • In bioinformatics: 1,884 out of 6,484
  • Year to date:
    • Site-wide: 2,740 out of 65,403
  • Since beginning of last month:
    • Site-wide: 128 out of 65,403

Web-based design and analysis tools for CRISPR base editing

bioinformatics more details view paper
  • Downloaded 704 times
  • Download rankings, all-time:
    • Site-wide: 12,825 out of 65,403
    • In bioinformatics: 2,100 out of 6,484
  • Year to date:
    • Site-wide: 15,771 out of 65,403
  • Since beginning of last month:
    • Site-wide: 40,627 out of 65,403

Cell-specific CRISPR/Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins

synthetic biology more details view paper
  • Downloaded 698 times
  • Download rankings, all-time:
    • Site-wide: 12,969 out of 65,403
    • In synthetic biology: 213 out of 620
  • Year to date:
    • Site-wide: 7,634 out of 65,403
  • Since beginning of last month:
    • Site-wide: 20,934 out of 65,403

Identification and prioritisation of causal variants in human genetic disorders from exome or whole genome sequencing data

bioinformatics more details view paper
  • Downloaded 547 times
  • Download rankings, all-time:
    • Site-wide: 18,173 out of 65,403
    • In bioinformatics: 2,740 out of 6,484
  • Year to date:
    • Site-wide: 33,379 out of 65,403
  • Since beginning of last month:
    • Site-wide: 54,299 out of 65,403

Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders

bioinformatics more details view paper
  • Downloaded 518 times
  • Download rankings, all-time:
    • Site-wide: 19,475 out of 65,403
    • In bioinformatics: 2,886 out of 6,484
  • Year to date:
    • Site-wide: 5,482 out of 65,403
  • Since beginning of last month:
    • Site-wide: 4,061 out of 65,403

Impact of cancer mutational signatures on transcription factor motifs in the human genome

bioinformatics more details view paper
  • Downloaded 508 times
  • Download rankings, all-time:
    • Site-wide: 19,977 out of 65,403
    • In bioinformatics: 2,945 out of 6,484
  • Year to date:
    • Site-wide: 27,890 out of 65,403
  • Since beginning of last month:
    • Site-wide: 44,199 out of 65,403

Single-fluorescent protein reporters allow parallel quantification of NK cell-mediated granzyme and caspase activities in single target cells

immunology more details view paper
  • Downloaded 468 times
  • Download rankings, all-time:
    • Site-wide: 21,989 out of 65,403
    • In immunology: 403 out of 1,661
  • Year to date:
    • Site-wide: 19,632 out of 65,403
  • Since beginning of last month:
    • Site-wide: 16,021 out of 65,403

Computational design of anti-CRISPR proteins with improved inhibition potency and expanded specificity

synthetic biology more details view paper
  • Downloaded 434 times
  • Download rankings, all-time:
    • Site-wide: 23,996 out of 65,403
    • In synthetic biology: 372 out of 620
  • Year to date:
    • Site-wide: 7,328 out of 65,403
  • Since beginning of last month:
    • Site-wide: 13,054 out of 65,403

Unraveling mitotic protein networks by 3D multiplexed epitope drug screening

systems biology more details view paper
  • Downloaded 263 times
  • Download rankings, all-time:
    • Site-wide: 38,784 out of 65,403
    • In systems biology: 1,216 out of 1,836
  • Year to date:
    • Site-wide: 56,807 out of 65,403
  • Since beginning of last month:
    • Site-wide: 45,616 out of 65,403

HTSlib-js: Developer toolkit for a client-side JavaScript interface for HTSlib

bioinformatics more details view paper
  • Downloaded 257 times
  • Download rankings, all-time:
    • Site-wide: 39,465 out of 65,403
    • In bioinformatics: 4,706 out of 6,484
  • Year to date:
    • Site-wide: 41,387 out of 65,403
  • Since beginning of last month:
    • Site-wide: 38,521 out of 65,403

Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4

genomics more details view paper
  • Downloaded 183 times
  • Download rankings, all-time:
    • Site-wide: 48,785 out of 65,403
    • In genomics: 3,894 out of 4,463
  • Year to date:
    • Site-wide: 25,647 out of 65,403
  • Since beginning of last month:
    • Site-wide: 30,000 out of 65,403

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