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Author: Bo Li

Rankings

  • All-time downloads: 70,266 (rank: 1,981 )
  • Categories:
    • biochemistry: 238 (rank: 19,404 (tie) )
    • bioinformatics: 22,102 (rank: 143 )
    • cancer biology: 6,197 (rank: 395 )
    • cell biology: 3,307 (rank: 1,415 (tie) )
    • developmental biology: 3,998 (rank: 364 )
    • genetics: 1,235 (rank: 13,561 (tie) )
    • genomics: 17,876 (rank: 661 )
    • immunology: 5,668 (rank: 1,305 (tie) )
    • microbiology: 738 (rank: 19,181 (tie) )
    • molecular biology: 256 (rank: 20,575 (tie) )
    • neuroscience: 8,139 (rank: 1,727 )
    • plant biology: 144 (rank: 18,350 (tie) )
    • systems biology: 368 (rank: 10,198 (tie) )

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Preprints

STAR-Fusion: Fast and Accurate Fusion Transcript Detection from RNA-Seq

bioinformatics more details view paper
  • Downloaded 8,267 times
  • Download rankings, all-time:
    • Site-wide: 1,057
    • In bioinformatics: 63
  • Year to date:
    • Site-wide: 3,458
  • Since beginning of last month:
    • Site-wide: 5,772

A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

genomics more details view paper
  • Downloaded 7,506 times
  • Download rankings, all-time:
    • Site-wide: 1,191
    • In genomics: 107
  • Year to date:
    • Site-wide: 7,111
  • Since beginning of last month:
    • Site-wide: 12,401

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

genomics more details view paper
  • Downloaded 4,279 times
  • Download rankings, all-time:
    • Site-wide: 2,559
    • In genomics: 278
  • Year to date:
    • Site-wide: 17,053
  • Since beginning of last month:
    • Site-wide: 15,865

Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer

cancer biology more details view paper
  • Downloaded 3,869 times
  • Download rankings, all-time:
    • Site-wide: 2,962
    • In cancer biology: 43
  • Year to date:
    • Site-wide: 2,165
  • Since beginning of last month:
    • Site-wide: 2,488

Decoding the development of the blood and immune systems during human fetal liver haematopoiesis

developmental biology more details view paper
  • Downloaded 3,605 times
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    • Site-wide: 3,291
    • In developmental biology: 27
  • Year to date:
    • Site-wide: 19,172
  • Since beginning of last month:
    • Site-wide: 27,368

Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs

cell biology more details view paper
  • Downloaded 3,307 times
  • Download rankings, all-time:
    • Site-wide: 3,712
    • In cell biology: 71
  • Year to date:
    • Site-wide: 6,686
  • Since beginning of last month:
    • Site-wide: 6,387

A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2

genomics more details view paper
  • Downloaded 3,180 times
  • Download rankings, all-time:
    • Site-wide: 3,930
    • In genomics: 436
  • Year to date:
    • Site-wide: 344
  • Since beginning of last month:
    • Site-wide: 307

Evaluation of de novo transcriptome assemblies from RNA-Seq data

bioinformatics more details view paper
  • Downloaded 3,063 times
  • Download rankings, all-time:
    • Site-wide: 4,144
    • In bioinformatics: 419
  • Year to date:
    • Site-wide: 120,434
  • Since beginning of last month:
    • Site-wide: 123,826

Transcriptome Deconvolution of Heterogeneous Tumor Samples with Immune Infiltration

bioinformatics more details view paper
  • Downloaded 2,271 times
  • Download rankings, all-time:
    • Site-wide: 6,394
    • In bioinformatics: 728
  • Year to date:
    • Site-wide: 84,334
  • Since beginning of last month:
    • Site-wide: 121,420

A Single-Cell Immune Atlas of Triple Negative Breast Cancer Reveals Novel Immune Cell Subsets

immunology more details view paper
  • Downloaded 2,260 times
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    • Site-wide: 6,440
    • In immunology: 195
  • Year to date:
    • Site-wide: 12,567
  • Since beginning of last month:
    • Site-wide: 14,562

The landscape of antigen-specific T cells in human cancers

bioinformatics more details view paper
  • Downloaded 2,087 times
  • Download rankings, all-time:
    • Site-wide: 7,227
    • In bioinformatics: 850
  • Year to date:
    • Site-wide: 28,816
  • Since beginning of last month:
    • Site-wide: 82,326

Cumulus: a cloud-based data analysis framework for large-scale single-cell and single-nucleus RNA-seq

bioinformatics more details view paper
  • Downloaded 1,827 times
  • Download rankings, all-time:
    • Site-wide: 8,805
    • In bioinformatics: 1,062
  • Year to date:
    • Site-wide: 17,139
  • Since beginning of last month:
    • Site-wide: 17,121

The central amygdala controls learning in the lateral amygdala

neuroscience more details view paper
  • Downloaded 1,685 times
  • Download rankings, all-time:
    • Site-wide: 9,947
    • In neuroscience: 1,059
  • Year to date:
    • Site-wide: 91,900
  • Since beginning of last month:
    • Site-wide: 91,687

Ultrasensitive detection of TCR hypervariable region in solid-tissue RNA-seq data

bioinformatics more details view paper
  • Downloaded 1,580 times
  • Download rankings, all-time:
    • Site-wide: 10,945
    • In bioinformatics: 1,339
  • Year to date:
    • Site-wide: 89,097
  • Since beginning of last month:
    • Site-wide: 111,429

Opposing contributions of GABAergic and glutamatergic ventral pallidal neurons to motivational behaviours

neuroscience more details view paper
  • Downloaded 1,456 times
  • Download rankings, all-time:
    • Site-wide: 12,311
    • In neuroscience: 1,387
  • Year to date:
    • Site-wide: 55,046
  • Since beginning of last month:
    • Site-wide: 94,045

Genetic predisposition to myeloproliferative neoplasms implicates hematopoietic stem cell biology

genetics more details view paper
  • Downloaded 1,235 times
  • Download rankings, all-time:
    • Site-wide: 15,838
    • In genetics: 771
  • Year to date:
    • Site-wide: 31,210
  • Since beginning of last month:
    • Site-wide: 48,244

Single cell profiling of immature human postnatal thymocytes resolves the complexity of intra-thymic lineage differentiation and thymus seeding precursors.

immunology more details view paper
  • Downloaded 1,213 times
  • Download rankings, all-time:
    • Site-wide: 16,252
    • In immunology: 474
  • Year to date:
    • Site-wide: 19,293
  • Since beginning of last month:
    • Site-wide: 32,561

EPIP: MHC-I epitope prediction integrating mass spectrometry derived motifs and tissue-specific expression profiles

bioinformatics more details view paper
  • Downloaded 1,093 times
  • Download rankings, all-time:
    • Site-wide: 18,960
    • In bioinformatics: 2,244
  • Year to date:
    • Site-wide: 41,718
  • Since beginning of last month:
    • Site-wide: 36,028

Comparative analysis of sequencing technologies platforms for single-cell transcriptomics

genomics more details view paper
  • Downloaded 1,065 times
  • Download rankings, all-time:
    • Site-wide: 19,695
    • In genomics: 1,961
  • Year to date:
    • Site-wide: 119,460
  • Since beginning of last month:
    • Site-wide: 117,646

Parvalbumin interneuron dysfunction in a thalamus - prefrontal cortex circuit in Disc1 deficiency mice

neuroscience more details view paper
  • Downloaded 1,061 times
  • Download rankings, all-time:
    • Site-wide: 19,782
    • In neuroscience: 2,480
  • Year to date:
    • Site-wide: 101,596
  • Since beginning of last month:
    • Site-wide: 81,092

The common neoantigens in colorectal cancer are predicted and validated to be presented or immunogenic

immunology more details view paper
  • Downloaded 1,021 times
  • Download rankings, all-time:
    • Site-wide: 20,953
    • In immunology: 616
  • Year to date:
    • Site-wide: 25,072
  • Since beginning of last month:
    • Site-wide: 42,118

A fluorescent sensor for spatiotemporally resolved endocannabinoid dynamics in vitro and in vivo

neuroscience more details view paper
  • Downloaded 1,013 times
  • Download rankings, all-time:
    • Site-wide: 21,208
    • In neuroscience: 2,682
  • Year to date:
    • Site-wide: 4,676
  • Since beginning of last month:
    • Site-wide: 6,352

An insula-central amygdala circuit for behavioral inhibition

neuroscience more details view paper
  • Downloaded 1,011 times
  • Download rankings, all-time:
    • Site-wide: 21,267
    • In neuroscience: 2,690
  • Year to date:
    • Site-wide: 86,636
  • Since beginning of last month:
    • Site-wide: 63,013

Prober: A general toolkit for analyzing sequencing-based 'toeprinting' assays

genomics more details view paper
  • Downloaded 1,005 times
  • Download rankings, all-time:
    • Site-wide: 21,422
    • In genomics: 2,109
  • Year to date:
    • Site-wide: 104,872
  • Since beginning of last month:
    • Site-wide: 56,796

RNA polymerase mapping in plants identifies enhancers enriched in causal variants

genomics more details view paper
  • Downloaded 841 times
  • Download rankings, all-time:
    • Site-wide: 27,631
    • In genomics: 2,541
  • Year to date:
    • Site-wide: 61,716
  • Since beginning of last month:
    • Site-wide: 64,117

Population coding of valence in the basolateral amygdala

neuroscience more details view paper
  • Downloaded 784 times
  • Download rankings, all-time:
    • Site-wide: 30,540
    • In neuroscience: 4,102
  • Year to date:
    • Site-wide: 128,130
  • Since beginning of last month:
    • Site-wide: 136,235

DNA methylation-based immune cell deconvolution in solid tumors

bioinformatics more details view paper
  • Downloaded 748 times
  • Download rankings, all-time:
    • Site-wide: 32,539
    • In bioinformatics: 3,643
  • Year to date:
    • Site-wide: 60,455
  • Since beginning of last month:
    • Site-wide: 72,463

Novel pipeline of high-frequency neoantigens heathy donor-based validation in breast cancer

cancer biology more details view paper
  • Downloaded 724 times
  • Download rankings, all-time:
    • Site-wide: 34,045
    • In cancer biology: 917
  • Year to date:
    • Site-wide: 46,816
  • Since beginning of last month:
    • Site-wide: 45,764

A central amygdala-globus pallidus circuit conveys unconditioned stimulus information and controls fear learning

neuroscience more details view paper
  • Downloaded 602 times
  • Download rankings, all-time:
    • Site-wide: 43,287
    • In neuroscience: 6,191
  • Year to date:
    • Site-wide: 37,732
  • Since beginning of last month:
    • Site-wide: 39,989

Genome profiles of lymphovascular breast cancer cells reveal multiple clonally differentiated outcomes with multi-regional LCM and G&T-seq

cancer biology more details view paper
  • Downloaded 582 times
  • Download rankings, all-time:
    • Site-wide: 45,158
    • In cancer biology: 1,256
  • Year to date:
    • Site-wide: 43,774
  • Since beginning of last month:
    • Site-wide: 32,091

The co-stimulation of anti-CD28 and IL-2 enhances the sensitivity of ELISPOT assays for detection of neoantigen-specific T cells in PBMC

immunology more details view paper
  • Downloaded 534 times
  • Download rankings, all-time:
    • Site-wide: 50,094
    • In immunology: 1,422
  • Year to date:
    • Site-wide: 33,291
  • Since beginning of last month:
    • Site-wide: 34,782

Molecular profiles and mutation burden analysis in Chinese patients with gastric carcinoma

cancer biology more details view paper
  • Downloaded 452 times
  • Download rankings, all-time:
    • Site-wide: 60,560
    • In cancer biology: 1,728
  • Year to date:
    • Site-wide: 65,785
  • Since beginning of last month:
    • Site-wide: 95,973

Analysis of metagenome-assembled genomes from the mouse gut microbiota reveals distinctive strain-level characteristics

microbiology more details view paper
  • Downloaded 418 times
  • Download rankings, all-time:
    • Site-wide: 65,664
    • In microbiology: 4,361
  • Year to date:
    • Site-wide: 46,899
  • Since beginning of last month:
    • Site-wide: 104,266

Recurrent Neoantigens in Colorectal Cancer as Potential Immunotherapy Targets

cancer biology more details view paper
  • Downloaded 380 times
  • Download rankings, all-time:
    • Site-wide: 71,859
    • In cancer biology: 2,091
  • Year to date:
    • Site-wide: 62,709
  • Since beginning of last month:
    • Site-wide: 114,960

Identification of Cancer-associated Metabolic Vulnerabilities by Modeling Multi-objective Optimality in Metabolism

systems biology more details view paper
  • Downloaded 368 times
  • Download rankings, all-time:
    • Site-wide: 74,072
    • In systems biology: 1,761
  • Year to date:
    • Site-wide: 133,220
  • Since beginning of last month:
    • Site-wide: 116,354

Comprehensive and Integrated Genomic Characterization of Human Immunome in Cancer

immunology more details view paper
  • Downloaded 367 times
  • Download rankings, all-time:
    • Site-wide: 74,282
    • In immunology: 2,100
  • Year to date:
    • Site-wide: 54,655
  • Since beginning of last month:
    • Site-wide: 59,310

Metabolic features of mouse and human retinas: rods vs. cones, macula vs. periphery, retina vs. RPE

neuroscience more details view paper
  • Downloaded 341 times
  • Download rankings, all-time:
    • Site-wide: 79,100
    • In neuroscience: 12,085
  • Year to date:
    • Site-wide: 52,253
  • Since beginning of last month:
    • Site-wide: 54,354

Defining Strawberry Uniformity using 3D Imaging and Genetic Mapping

bioinformatics more details view paper
  • Downloaded 340 times
  • Download rankings, all-time:
    • Site-wide: 79,388
    • In bioinformatics: 7,267
  • Year to date:
    • Site-wide: 85,003
  • Since beginning of last month:
    • Site-wide: 78,834

Bi-clustering based biological and clinical characterization of colorectal cancer in complementary to CMS classification

bioinformatics more details view paper
  • Downloaded 337 times
  • Download rankings, all-time:
    • Site-wide: 79,765
    • In bioinformatics: 7,309
  • Year to date:
    • Site-wide: 120,209
  • Since beginning of last month:
    • Site-wide: 122,776

Verify Hub Genes of expression profile in aortic dissection

bioinformatics more details view paper
  • Downloaded 275 times
  • Download rankings, all-time:
    • Site-wide: 92,907
    • In bioinformatics: 8,129
  • Year to date:
    • Site-wide: 135,579
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    • Site-wide: 107,366

A Comprehensive Survey of Mutations in Oesophageal Carcinoma Reveals Recurrent Neoantigens as Potential Immunotherapy Targets

immunology more details view paper
  • Downloaded 273 times
  • Download rankings, all-time:
    • Site-wide: 93,167
    • In immunology: 2,659
  • Year to date:
    • Site-wide: 58,210
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    • Site-wide: 67,753

RecO impedes RecG-SSB binding to impair the strand annealing recombination pathway in E.coli

molecular biology more details view paper
  • Downloaded 256 times
  • Download rankings, all-time:
    • Site-wide: 96,855
    • In molecular biology: 2,881
  • Year to date:
    • Site-wide: 101,609
  • Since beginning of last month:
    • Site-wide: 121,517

Inhibition of mitochondrial respiration impairs nutrient consumption and metabolite transport in human retinal pigment epithelium

biochemistry more details view paper
  • Downloaded 238 times
  • Download rankings, all-time:
    • Site-wide: 101,079
    • In biochemistry: 2,963
  • Year to date:
    • Site-wide: 56,950
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    • Site-wide: 34,078

Impaired Fetal Lung Development can be Rescued by Administration of Extracellular Vesicles Derived from Amniotic Fluid Stem Cells

developmental biology more details view paper
  • Downloaded 219 times
  • Download rankings, all-time:
    • Site-wide: 105,272
    • In developmental biology: 2,846
  • Year to date:
    • Site-wide: 36,796
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    • Site-wide: 17,917

Related Topics of a Novel TCR-based Cancer Detection Approach

bioinformatics more details view paper
  • Downloaded 214 times
  • Download rankings, all-time:
    • Site-wide: 106,581
    • In bioinformatics: 8,974
  • Year to date:
    • Site-wide: 78,470
  • Since beginning of last month:
    • Site-wide: 75,449

Bimodality of gene expression in cancer patient tumors as interpretable biomarkers for drug sensitivity

cancer biology more details view paper
  • Downloaded 190 times
  • Download rankings, all-time:
    • Site-wide: 111,894
    • In cancer biology: 3,414
  • Year to date:
    • Site-wide: 52,953
  • Since beginning of last month:
    • Site-wide: 67,398

Structural changes in the gut microbiome of short-term and long-term medical workers compared to normal controls

microbiology more details view paper
  • Downloaded 189 times
  • Download rankings, all-time:
    • Site-wide: 112,018
    • In microbiology: 8,341
  • Year to date:
    • Site-wide: 118,952
  • Since beginning of last month:
    • Site-wide: 86,750

Sex-specific stress-related behavioral phenotypes and central amygdala dysfunction in a mouse model of 16p11.2 microdeletion

neuroscience more details view paper
  • Downloaded 186 times
  • Download rankings, all-time:
    • Site-wide: 112,853
    • In neuroscience: 17,367
  • Year to date:
    • Site-wide: 66,402
  • Since beginning of last month:
    • Site-wide: 85,560

Time-course single-cell RNA sequencing reveals transcriptional dynamics and heterogeneity of limbal stem cells derived from human pluripotent stem cells

developmental biology more details view paper
  • Downloaded 174 times
  • Download rankings, all-time:
    • Site-wide: 115,453
    • In developmental biology: 3,121
  • Year to date:
    • Site-wide: 57,125
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    • Site-wide: 103,892

Two Types of Cinnamoyl-CoA Reductase Function Divergently in Tissue Lignification, Phenylpropanoids Flux Control, and Inter-pathway Cross-talk with Glucosinolates as Revealed in Brassica napus

plant biology more details view paper
  • Downloaded 144 times
  • Download rankings, all-time:
    • Site-wide: 121,942
    • In plant biology: 3,417
  • Year to date:
    • Site-wide: 21,726
  • Since beginning of last month:
    • Site-wide: 10,619

Development of next-generation sequencing-based sterility test

microbiology more details view paper
  • Downloaded 131 times
  • Download rankings, all-time:
    • Site-wide: 124,452
    • In microbiology: 9,470
  • Year to date:
    • Site-wide: 30,850
  • Since beginning of last month:
    • Site-wide: 19,119

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