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Author: Bas Teusink

Rankings

  • All-time downloads: 13,105 (rank: 15,401 (tie) )
  • Categories:
    • genomics: 458 (rank: 37,429 (tie) )
    • microbiology: 5,182 (rank: 2,823 (tie) )
    • molecular biology: 294 (rank: 19,841 (tie) )
    • systems biology: 7,171 (rank: 415 )

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Preprints

Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies

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Selection for cell yield does not reduce overflow metabolism in E. coli

microbiology more details view paper

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Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite

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  • Downloaded 2,174 times
  • Download rankings, all-time:
    • Site-wide: 7,212
    • In systems biology: 125
  • Year to date:
    • Site-wide: 29,027
  • Since beginning of last month:
    • Site-wide: 29,319

Emergence of stable coexistence in a complex microbial community through metabolic cooperation and spatio-temporal niche partitioning

microbiology more details view paper
  • Downloaded 2,082 times
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    • Site-wide: 7,654
    • In microbiology: 439
  • Year to date:
    • Site-wide: 17,540
  • Since beginning of last month:
    • Site-wide: 24,200

Low affinity membrane transporters can increase net substrate uptake rate by reducing efflux

microbiology more details view paper
  • Downloaded 1,839 times
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    • Site-wide: 9,204
    • In microbiology: 530
  • Year to date:
    • Site-wide: 28,718
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    • Site-wide: 29,361

A Systematic Assessment Of Current Genome-Scale Metabolic Reconstruction Tools

systems biology more details view paper
  • Downloaded 1,166 times
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    • Site-wide: 18,135
    • In systems biology: 357
  • Year to date:
    • Site-wide: 86,901
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The common message of constraint-based optimization approaches: overflow metabolism is caused by two growth-limiting constraints

systems biology more details view paper
  • Downloaded 828 times
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    • Site-wide: 29,777
    • In systems biology: 634
  • Year to date:
    • Site-wide: 100,317
  • Since beginning of last month:
    • Site-wide: 97,883

A yeast FRET biosensor enlightens cAMP signalling

microbiology more details view paper
  • Downloaded 705 times
  • Download rankings, all-time:
    • Site-wide: 37,128
    • In microbiology: 2,223
  • Year to date:
    • Site-wide: 36,952
  • Since beginning of last month:
    • Site-wide: 34,567

Maintaining maximal metabolic flux by gene expression control

systems biology more details view paper
  • Downloaded 635 times
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    • Site-wide: 42,628
    • In systems biology: 946
  • Year to date:
    • Site-wide: 122,623
  • Since beginning of last month:
    • Site-wide: 67,642

Microbial competition reduces interaction distances to the low µm-range

microbiology more details view paper
  • Downloaded 556 times
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    • Site-wide: 50,277
    • In microbiology: 3,151
  • Year to date:
    • Site-wide: 117,729
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    • Site-wide: 85,779

Elementary Growth Modes provide a molecular description of cellular self-fabrication

systems biology more details view paper
  • Downloaded 506 times
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    • Site-wide: 56,130
    • In systems biology: 1,307
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    • Site-wide: 124,858
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    • Site-wide: 118,921

Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments

systems biology more details view paper
  • Downloaded 504 times
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    • Site-wide: 56,355
    • In systems biology: 1,314
  • Year to date:
    • Site-wide: 18,664
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    • Site-wide: 45,475

Bifurcation analysis of metabolic pathways: an illustration from yeast glycolysis

systems biology more details view paper
  • Downloaded 481 times
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    • Site-wide: 59,377
    • In systems biology: 1,394
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    • Site-wide: 107,951
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    • Site-wide: 67,749

Glucose limitation in Lactococcus shapes a single-peaked fitness landscape exposing membrane occupancy as a constraint

genomics more details view paper
  • Downloaded 458 times
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    • Site-wide: 62,689
    • In genomics: 4,527
  • Year to date:
    • Site-wide: 101,447
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    • Site-wide: 102,873

Unlocking Elementary Conversion Modes: ecmtool unveils all capabilities of metabolic networks

systems biology more details view paper
  • Downloaded 417 times
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    • Site-wide: 68,957
    • In systems biology: 1,621
  • Year to date:
    • Site-wide: 70,645
  • Since beginning of last month:
    • Site-wide: 77,265

An improved ATP FRET sensor for yeast shows heterogeneity during nutrient transitions

molecular biology more details view paper
  • Downloaded 294 times
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    • Site-wide: 92,616
    • In molecular biology: 2,735
  • Year to date:
    • Site-wide: 123,164
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    • Site-wide: 128,776

A multi-phase multi-objective genome-scale model shows diverse redox balance strategies in yeasts

systems biology more details view paper
  • Downloaded 265 times
  • Download rankings, all-time:
    • Site-wide: 99,227
    • In systems biology: 2,280
  • Year to date:
    • Site-wide: 14,094
  • Since beginning of last month:
    • Site-wide: 33,508

A multi-phase multi-objective dynamic genome-scale model shows different redox balancing among yeast species in fermentation

systems biology more details view paper
  • Downloaded 195 times
  • Download rankings, all-time:
    • Site-wide: 115,732
    • In systems biology: 2,588
  • Year to date:
    • Site-wide: 21,262
  • Since beginning of last month:
    • Site-wide: 54,472

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