Author: Nitin Baliga

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Preprints

The mechanisms of in vivo commensal control of Clostridioides difficile virulence

• Downloaded 1,617 times
• Download rankings, all-time:
  • Site-wide: 13,701
  • In microbiology: 795
• Year to date:
  • Site-wide: 6,197
• Since beginning of last month:
  • Site-wide: 1,953

Genome-scale transcriptional regulatory network models for the mouse and human striatum predict roles for SMAD3 and other transcription factors in Huntington's disease

• Downloaded 876 times
• Download rankings, all-time:
  • Site-wide: 34,748
  • In systems biology: 707
• Year to date:
  • Site-wide: 137,226
• Since beginning of last month:
  • Site-wide: 124,646

Negative plant-microbiome feedback limits productivity in aquaponics

• Downloaded 860 times
• Download rankings, all-time:
  • Site-wide: 35,634
  • In microbiology: 2,114
• Year to date:
  • Site-wide: 63,054
• Since beginning of last month:
  • Site-wide: 52,410

PerSort facilitates characterization and elimination of persister subpopulation in mycobacteria

• Downloaded 844 times
• Download rankings, all-time:
  • Site-wide: 36,631
  • In microbiology: 2,182
• Year to date:
  • Site-wide: 110,968
• Since beginning of last month:
  • Site-wide: 89,976

A genome wide dosage suppressor network reveals genetic robustness and a novel mechanism for Huntington’s disease

• Downloaded 789 times
• Download rankings, all-time:
  • Site-wide: 40,421
  • In genomics: 3,244
• Year to date:
  • Site-wide: 131,550
• Since beginning of last month:
  • Site-wide: 133,545

Combining inferred regulatory and reconstructed metabolic networks enhances phenotype prediction in yeast

• Downloaded 742 times
• Download rankings, all-time:
  • Site-wide: 44,135
  • In systems biology: 935
• Year to date:
  • Site-wide: 159,887
• Since beginning of last month:
  • Site-wide: 158,164

Inference of bacterial small RNA regulatory networks and integration with transcription factor driven regulatory networks

• Downloaded 497 times
• Download rankings, all-time:
  • Site-wide: 73,694
  • In systems biology: 1,631
• Year to date:
  • Site-wide: 116,669
• Since beginning of last month:
  • Site-wide: 142,233

Predictive regulatory and metabolic network models for systems analysis of Clostridioides difficile

• Downloaded 472 times
• Download rankings, all-time:
  • Site-wide: 78,212
  • In systems biology: 1,747
• Year to date:
  • Site-wide: 31,674
• Since beginning of last month:
  • Site-wide: 25,007

Genetic program activity delineates risk, relapse, and therapy responsiveness in Multiple Myeloma

• Downloaded 457 times
• Download rankings, all-time:
  • Site-wide: 80,996
  • In systems biology: 1,805
• Year to date:
  • Site-wide: 57,257
• Since beginning of last month:
  • Site-wide: 72,075

Quantitative prediction of conditional vulnerabilities in regulatory and metabolic networks of Mycobacterium tuberculosis

• Downloaded 390 times
• Download rankings, all-time:
  • Site-wide: 94,801
  • In systems biology: 2,087
• Year to date:
  • Site-wide: 23,655
• Since beginning of last month:
  • Site-wide: 27,918

Intricate genetic programs controlling dormancy in Mycobacterium tuberculosis

• Downloaded 379 times
• Download rankings, all-time:
  • Site-wide: 97,258
  • In systems biology: 2,140
• Year to date:
  • Site-wide: 144,867
• Since beginning of last month:
  • Site-wide: 116,449

MtrA regulation of essential peptidoglycan cleavage in Mycobacterium tuberculosis during infection

• Downloaded 369 times
• Download rankings, all-time:
  • Site-wide: 99,575
  • In systems biology: 2,185
• Year to date:
  • Site-wide: 25,785
• Since beginning of last month:
  • Site-wide: 38,167

A system-level gene regulatory network model for Plasmodium falciparum

• Downloaded 304 times
• Download rankings, all-time:
  • Site-wide: 115,746
  • In systems biology: 2,498
• Year to date:
  • Site-wide: 122,162
• Since beginning of last month:
  • Site-wide: 113,457

Disrupting the ArcA regulatory network increases tetracycline susceptibility of TetR Escherichia coli

• Downloaded 270 times
• Download rankings, all-time:
  • Site-wide: 124,737
  • In systems biology: 2,703
• Year to date:
  • Site-wide: 72,981
• Since beginning of last month:
  • Site-wide: 92,305

Synergistic epistasis enhances cooperativity of mutualistic interspecies interactions

• Downloaded 239 times
• Download rankings, all-time:
  • Site-wide: 132,843
  • In evolutionary biology: 6,430
• Year to date:
  • Site-wide: 143,640
• Since beginning of last month:
  • Site-wide: 138,445

Transcriptome signature of cell viability predicts drug response and drug interaction for Tuberculosis

• Downloaded 230 times
• Download rankings, all-time:
  • Site-wide: 135,332
  • In microbiology: 9,960
• Year to date:
  • Site-wide: 49,286
• Since beginning of last month:
  • Site-wide: 61,394

A plastid antiporter as a bioindicator of Thalassiosira pseudonana resilience

• Downloaded 192 times
• Download rankings, all-time:
  • Site-wide: 144,568
  • In systems biology: 3,021
• Year to date:
  • Site-wide: 97,669
• Since beginning of last month:
  • Site-wide: 74,332

Autophagy as a mechanism for adaptive prediction-mediated emergence of drug resistance

• Downloaded 186 times
• Download rankings, all-time:
  • Site-wide: 145,932
  • In evolutionary biology: 6,969
• Year to date:
  • Site-wide: 63,974
• Since beginning of last month:
  • Site-wide: 42,150