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Author: Barbara E Engelhardt

Rankings

  • All-time downloads: 35,669 (rank: 5,833 )
  • Categories:
    • bioinformatics: 4,262 (rank: 3,595 (tie) )
    • cell biology: 668 (rank: 18,971 (tie) )
    • genetics: 8,810 (rank: 2,175 (tie) )
    • genomics: 20,055 (rank: 699 )
    • neuroscience: 842 (rank: 35,795 (tie) )
    • systems biology: 1,032 (rank: 5,204 (tie) )

Downloads per author, site-wide

Preprints

The GTEx Consortium atlas of genetic regulatory effects across human tissues

genetics more details view paper
  • Downloaded 8,810 times
  • Download rankings, all-time:
    • Site-wide: 1,263
    • In genetics: 28
  • Year to date:
    • Site-wide: 5,851
  • Since beginning of last month:
    • Site-wide: 10,004

Local genetic effects on gene expression across 44 human tissues

genomics more details view paper
  • Downloaded 4,569 times
  • Download rankings, all-time:
    • Site-wide: 3,028
    • In genomics: 290
  • Year to date:
    • Site-wide: 74,993
  • Since beginning of last month:
    • Site-wide: 75,965

Co-expression networks reveal the tissue-specific regulation of transcription and splicing

genomics more details view paper
  • Downloaded 3,802 times
  • Download rankings, all-time:
    • Site-wide: 3,908
    • In genomics: 386
  • Year to date:
    • Site-wide: 111,802
  • Since beginning of last month:
    • Site-wide: 134,349

Distant regulatory effects of genetic variation in multiple human tissues

genomics more details view paper
  • Downloaded 2,911 times
  • Download rankings, all-time:
    • Site-wide: 5,755
    • In genomics: 575
  • Year to date:
    • Site-wide: 66,194
  • Since beginning of last month:
    • Site-wide: 68,699

Optimal gene selection for cell type discrimination in single cell analyses

genomics more details view paper
  • Downloaded 2,781 times
  • Download rankings, all-time:
    • Site-wide: 6,135
    • In genomics: 619
  • Year to date:
    • Site-wide: 50,953
  • Since beginning of last month:
    • Site-wide: 92,489

Clustering gene expression time series data using an infinite Gaussian process mixture model

bioinformatics more details view paper
  • Downloaded 2,609 times
  • Download rankings, all-time:
    • Site-wide: 6,728
    • In bioinformatics: 700
  • Year to date:
    • Site-wide: 45,024
  • Since beginning of last month:
    • Site-wide: 140,317

netNMF-sc: Leveraging gene-gene interactions for imputation and dimensionality reduction in single-cell expression analysis

genomics more details view paper
  • Downloaded 2,348 times
  • Download rankings, all-time:
    • Site-wide: 7,888
    • In genomics: 797
  • Year to date:
    • Site-wide: 76,531
  • Since beginning of last month:
    • Site-wide: 123,527

A robust nonlinear low-dimensional manifold for single cell RNA-seq data

genomics more details view paper
  • Downloaded 1,820 times
  • Download rankings, all-time:
    • Site-wide: 11,501
    • In genomics: 1,135
  • Year to date:
    • Site-wide: 81,358
  • Since beginning of last month:
    • Site-wide: 46,065

A Bayesian nonparametric semi-supervised model for integration of multiple single-cell experiments

bioinformatics more details view paper
  • Downloaded 1,353 times
  • Download rankings, all-time:
    • Site-wide: 18,084
    • In bioinformatics: 2,046
  • Year to date:
    • Site-wide: 37,901
  • Since beginning of last month:
    • Site-wide: 72,621

GT-TS: Experimental design for maximizing cell type discovery in single-cell data

genomics more details view paper
  • Downloaded 1,287 times
  • Download rankings, all-time:
    • Site-wide: 19,504
    • In genomics: 1,821
  • Year to date:
    • Site-wide: 94,075
  • Since beginning of last month:
    • Site-wide: 92,731

Detecting differential growth of microbial populations with Gaussian process regression

systems biology more details view paper
  • Downloaded 1,032 times
  • Download rankings, all-time:
    • Site-wide: 27,282
    • In systems biology: 527
  • Year to date:
    • Site-wide: 55,490
  • Since beginning of last month:
    • Site-wide: 153,488

Brain kernel: a new spatial covariance function for fMRI data

neuroscience more details view paper
  • Downloaded 842 times
  • Download rankings, all-time:
    • Site-wide: 36,690
    • In neuroscience: 4,883
  • Year to date:
    • Site-wide: 7,078
  • Since beginning of last month:
    • Site-wide: 3,212

A self-exciting point process to study multi-cellular spatial signaling patterns

cell biology more details view paper
  • Downloaded 668 times
  • Download rankings, all-time:
    • Site-wide: 51,057
    • In cell biology: 2,170
  • Year to date:
    • Site-wide: 30,527
  • Since beginning of last month:
    • Site-wide: 66,436

Differentially methylated regions and methylation QTLs for teen depression and early puberty in the Fragile Families Child Wellbeing Study

genomics more details view paper
  • Downloaded 355 times
  • Download rankings, all-time:
    • Site-wide: 102,779
    • In genomics: 6,135
  • Year to date:
    • Site-wide: 27,020
  • Since beginning of last month:
    • Site-wide: 16,188

Hierarchical Gaussian Processes and Mixtures of Experts to Model COVID-19 Patient Trajectories

bioinformatics more details view paper
  • Downloaded 300 times
  • Download rankings, all-time:
    • Site-wide: 116,633
    • In bioinformatics: 9,588
  • Year to date:
    • Site-wide: 34,480
  • Since beginning of last month:
    • Site-wide: 2,860

Telescoping bimodal latent Dirichlet allocation to identify expression QTLs across tissues

genomics more details view paper
  • Downloaded 182 times
  • Download rankings, all-time:
    • Site-wide: 146,712
    • In genomics: 7,538
  • Year to date:
    • Site-wide: 65,066
  • Since beginning of last month:
    • Site-wide: 6,417

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