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Author: Shantanu Singh

Rankings

  • All-time downloads: 21,742 (rank: 2,606 out of 396,059)
  • Categories:
    • bioinformatics: 14,985 (rank: 320 out of 33,591)
    • neuroscience: 317 (rank: 44,224 (tie) out of 66,107)
    • pharmacology and toxicology: 2,319 (rank: 150 (tie) out of 5,501)
    • systems biology: 4,121 (rank: 646 (tie) out of 11,557)

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Preprints

Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images

bioinformatics more details view paper
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    • In bioinformatics: 88 out of 8,680
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    • Site-wide: 1,906 out of 92,755
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    • Site-wide: 2,915 out of 92,755

Cell Painting, a high-content image-based assay for morphological profiling using multiplexed fluorescent dyes

systems biology more details view paper
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    • Site-wide: 1,688 out of 92,755
    • In systems biology: 38 out of 2,374
  • Year to date:
    • Site-wide: 13,954 out of 92,755
  • Since beginning of last month:
    • Site-wide: 15,754 out of 92,755

CytoGAN: Generative Modeling of Cell Images

bioinformatics more details view paper
  • Downloaded 2,987 times
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    • Site-wide: 1,954 out of 92,755
    • In bioinformatics: 346 out of 8,680
  • Year to date:
    • Site-wide: 7,539 out of 92,755
  • Since beginning of last month:
    • Site-wide: 4,687 out of 92,755

Automating Morphological Profiling with Generic Deep Convolutional Networks

bioinformatics more details view paper
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    • Site-wide: 2,474 out of 92,755
    • In bioinformatics: 445 out of 8,680
  • Year to date:
    • Site-wide: 9,721 out of 92,755
  • Since beginning of last month:
    • Site-wide: 6,941 out of 92,755

Repurposed High-Throughput Images Enable Biological Activity Prediction For Drug Discovery

pharmacology and toxicology more details view paper
  • Downloaded 2,319 times
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    • Site-wide: 2,985 out of 92,755
    • In pharmacology and toxicology: 20 out of 872
  • Year to date:
    • Site-wide: 43,716 out of 92,755
  • Since beginning of last month:
    • Site-wide: 54,485 out of 92,755

Weakly supervised learning of single-cell feature embeddings

bioinformatics more details view paper
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    • Site-wide: 3,608 out of 92,755
    • In bioinformatics: 655 out of 8,680
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  • Since beginning of last month:
    • Site-wide: 24,008 out of 92,755

Systematic morphological profiling of human gene and allele function reveals Hippo-NF-κB pathway connectivity

systems biology more details view paper
  • Downloaded 885 times
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    • Site-wide: 14,521 out of 92,755
    • In systems biology: 397 out of 2,374
  • Year to date:
    • Site-wide: 44,678 out of 92,755
  • Since beginning of last month:
    • Site-wide: 66,604 out of 92,755

Capturing single-cell heterogeneity via data fusion improves image-based profiling

bioinformatics more details view paper
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    • Site-wide: 14,776 out of 92,755
    • In bioinformatics: 2,282 out of 8,680
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    • Site-wide: 75,993 out of 92,755
  • Since beginning of last month:
    • Site-wide: 62,033 out of 92,755

Molecular diversity of glutamatergic and GABAergic synapses from multiplexed fluorescence imaging

neuroscience more details view paper
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    • Site-wide: 52,723 out of 92,755
    • In neuroscience: 9,242 out of 16,496
  • Year to date:
    • Site-wide: 9,811 out of 92,755
  • Since beginning of last month:
    • Site-wide: 3,826 out of 92,755

Predicting cell health phenotypes using image-based morphology profiling

bioinformatics more details view paper
  • Downloaded 276 times
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    • Site-wide: 58,771 out of 92,755
    • In bioinformatics: 6,357 out of 8,680
  • Year to date:
    • Site-wide: 12,108 out of 92,755
  • Since beginning of last month:
    • Site-wide: 740 out of 92,755

On the correlation between material-induced cell shape and phenotypical response of human mesenchymal stem cells

bioinformatics more details view paper
  • Downloaded 151 times
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    • Site-wide: 79,645 out of 92,755
    • In bioinformatics: 7,791 out of 8,680
  • Year to date:
    • Site-wide: 28,141 out of 92,755
  • Since beginning of last month:
    • Site-wide: 10,878 out of 92,755

Evolutionary design of optimal surface topographies for biomaterials

bioinformatics more details view paper
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    • Site-wide: 87,380 out of 92,755
    • In bioinformatics: 8,320 out of 8,680
  • Year to date:
    • Site-wide: 55,181 out of 92,755
  • Since beginning of last month:
    • Site-wide: 46,270 out of 92,755

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