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Author: Dan MacLean

Rankings

  • All-time downloads: 5,800 (rank: 16,633 (tie) out of 396,854)
  • Categories:
    • bioinformatics: 2,263 (rank: 4,803 out of 33,820)
    • genomics: 1,592 (rank: 11,739 (tie) out of 42,183)
    • plant biology: 1,945 (rank: 931 out of 15,238)

Downloads per author, site-wide

Preprints

Crowdsourced analysis of ash and ash dieback through the Open Ash Dieback project: A year 1 report on datasets and analyses contributed by a self-organising community.

genomics more details view paper
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    • Site-wide: 5,552 out of 92,934
    • In genomics: 909 out of 5,860
  • Year to date:
    • Site-wide: 57,118 out of 92,934
  • Since beginning of last month:
    • Site-wide: 50,182 out of 92,934

Using 2k + 2 bubble searches to find SNPs in k-mer graphs

bioinformatics more details view paper
  • Downloaded 867 times
  • Download rankings, all-time:
    • Site-wide: 15,046 out of 92,934
    • In bioinformatics: 2,320 out of 8,703
  • Year to date:
    • Site-wide: 73,409 out of 92,934
  • Since beginning of last month:
    • Site-wide: 56,338 out of 92,934

An Oomycete Effector Protein Induces Shade Avoidance In Arabidopsis And Attenuates Salicylate Signaling By Binding To Host Proteins Of The RADICAL-INDUCED CELL DEATH1 Family

plant biology more details view paper
  • Downloaded 821 times
  • Download rankings, all-time:
    • Site-wide: 16,387 out of 92,934
    • In plant biology: 359 out of 2,863
  • Year to date:
    • Site-wide: 65,496 out of 92,934
  • Since beginning of last month:
    • Site-wide: 58,581 out of 92,934

High-resolution Expression Profiling of Selected Gene Sets during Plant Immune Activation

plant biology more details view paper
  • Downloaded 758 times
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    • Site-wide: 18,505 out of 92,934
    • In plant biology: 404 out of 2,863
  • Year to date:
    • Site-wide: 24,602 out of 92,934
  • Since beginning of last month:
    • Site-wide: 22,817 out of 92,934

IDENTIFICATION OF GENOMIC REGIONS CARRYING A CAUSAL MUTATION IN UNORDERED GENOMES

bioinformatics more details view paper
  • Downloaded 683 times
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    • Site-wide: 21,575 out of 92,934
    • In bioinformatics: 3,107 out of 8,703
  • Year to date:
    • Site-wide: 72,493 out of 92,934
  • Since beginning of last month:
    • Site-wide: 34,704 out of 92,934

A convolutional neural network for predicting transcriptional regulators of genes in Arabidopsis transcriptome data reveals classification based on positive regulatory interactions

bioinformatics more details view paper
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    • Site-wide: 24,962 out of 92,934
    • In bioinformatics: 3,453 out of 8,703
  • Year to date:
    • Site-wide: 19,027 out of 92,934
  • Since beginning of last month:
    • Site-wide: 38,061 out of 92,934

Chromatin accessibility landscapes activated by cell surface and intracellular immune receptors

plant biology more details view paper
  • Downloaded 366 times
  • Download rankings, all-time:
    • Site-wide: 46,328 out of 92,934
    • In plant biology: 1,302 out of 2,863
  • Year to date:
    • Site-wide: 8,010 out of 92,934
  • Since beginning of last month:
    • Site-wide: 3,952 out of 92,934

Accurate plant pathogen effector protein classification ab initio with deepredeff, an ensemble of convolutional neural networks.

bioinformatics more details view paper
  • Downloaded 96 times
  • Download rankings, all-time:
    • Site-wide: 86,389 out of 92,934
    • In bioinformatics: 8,270 out of 8,703
  • Year to date:
    • Site-wide: 47,803 out of 92,934
  • Since beginning of last month:
    • Site-wide: 3,725 out of 92,934

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