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Author: David Hausler

Rankings

  • All-time downloads: 42,887 (rank: 852 out of 382,294)
  • Categories:
    • bioinformatics: 31,229 (rank: 75 out of 32,752)
    • evolutionary biology: 492 (rank: 10,124 (tie) out of 19,601)
    • genomics: 10,225 (rank: 1,373 out of 40,708)
    • neuroscience: 941 (rank: 17,126 (tie) out of 64,143)

Downloads per author, site-wide

Preprints

Genome Graphs

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    • Site-wide: 2,164 out of 89,194

Efficient de novo assembly of eleven human genomes using PromethION sequencing and a novel nanopore toolkit

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    • In bioinformatics: 48 out of 8,418
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    • Site-wide: 455 out of 89,194
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    • Site-wide: 1,591 out of 89,194

Rapid and efficient analysis of 20,000 RNA-seq samples with Toil

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    • In bioinformatics: 82 out of 8,418
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    • Site-wide: 11,469 out of 89,194
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    • Site-wide: 10,729 out of 89,194

Alignathon: A competitive assessment of whole genome alignment methods.

bioinformatics more details view paper
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    • In bioinformatics: 292 out of 8,418
  • Year to date:
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    • Site-wide: 45,121 out of 89,194

Linear Assembly of a Human Y Centromere

genomics more details view paper
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    • In genomics: 440 out of 5,693
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    • Site-wide: 55,439 out of 89,194
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    • Site-wide: 39,487 out of 89,194

Towards complete and error-free genome assemblies of all vertebrate species

genomics more details view paper
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    • In genomics: 511 out of 5,693
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    • Site-wide: 240 out of 89,194

A user’s guide to the online resources for data exploration, visualization, and discovery for the Pan-Cancer Analysis of Whole Genomes project (PCAWG)

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    • In bioinformatics: 594 out of 8,418
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    • Site-wide: 3,831 out of 89,194
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    • Site-wide: 5,973 out of 89,194

Comparative Annotation Toolkit (CAT) - simultaneous clade and personal genome annotation

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    • In bioinformatics: 888 out of 8,418
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    • Site-wide: 18,727 out of 89,194

Genomic profiling of childhood tumor patient-derived xenograft models to enable rational clinical trial design

genomics more details view paper
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    • In genomics: 928 out of 5,693
  • Year to date:
    • Site-wide: 8,653 out of 89,194
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    • Site-wide: 8,071 out of 89,194

The UCSC Genome Browser database: 2016 update

genomics more details view paper
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    • In genomics: 1,121 out of 5,693
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    • Site-wide: 37,075 out of 89,194

The UCSC Repeat Browser allows discovery and visualization of evolutionary conflict across repeat families

genomics more details view paper
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    • In genomics: 1,552 out of 5,693
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    • Site-wide: 18,006 out of 89,194
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    • Site-wide: 32,177 out of 89,194

The UCSC SARS-CoV-2 Genome Browser

genomics more details view paper
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    • Site-wide: 11,004 out of 89,194
    • In genomics: 1,566 out of 5,693
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    • Site-wide: 1,354 out of 89,194
  • Since beginning of last month:
    • Site-wide: 1,314 out of 89,194

A Flow Procedure for the Linearization of Genome Sequence Graphs.

bioinformatics more details view paper
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    • In bioinformatics: 1,973 out of 8,418
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  • Since beginning of last month:
    • Site-wide: 52,404 out of 89,194

Structurally conserved primate lncRNAs are transiently expressed during human cortical differentiation and influence cell type specific genes

neuroscience more details view paper
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    • Site-wide: 12,598 out of 89,194
    • In neuroscience: 1,988 out of 15,858
  • Year to date:
    • Site-wide: 48,229 out of 89,194
  • Since beginning of last month:
    • Site-wide: 45,358 out of 89,194

Combining accurate tumour genome simulation with crowd-sourcing to benchmark somatic structural variant detection

bioinformatics more details view paper
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    • Site-wide: 15,144 out of 89,194
    • In bioinformatics: 2,334 out of 8,418
  • Year to date:
    • Site-wide: 54,852 out of 89,194
  • Since beginning of last month:
    • Site-wide: 47,367 out of 89,194

KRAB Zinc Finger Proteins coordinate across evolutionary time scales to battle retroelements

evolutionary biology more details view paper
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    • Site-wide: 31,809 out of 89,194
    • In evolutionary biology: 2,157 out of 5,449
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    • Site-wide: 28,897 out of 89,194
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    • Site-wide: 32,173 out of 89,194

Framework for determining accuracy of RNA sequencing data for gene expression profiling of single samples

genomics more details view paper
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    • In genomics: 4,502 out of 5,693
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