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Author: Ian T. Fiddes

Rankings

  • All-time downloads: 24,700 (rank: 2,226 out of 423,867)
  • Categories:
    • bioinformatics: 2,426 (rank: 4,664 (tie) out of 35,929)
    • cancer biology: 4,034 (rank: 595 (tie) out of 29,905)
    • developmental biology: 2,029 (rank: 878 (tie) out of 16,726)
    • genomics: 13,072 (rank: 1,017 out of 44,253)
    • neuroscience: 3,139 (rank: 5,052 (tie) out of 71,638)

Downloads per author, site-wide

Preprints

A robust benchmark for germline structural variant detection

genomics more details view paper
  • Downloaded 5,021 times
  • Download rankings, all-time:
    • Site-wide: 823 out of 100,334
    • In genomics: 166 out of 6,222
  • Year to date:
    • Site-wide: 772 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

Mutation detection in thousands of acute myeloid leukemia cells using single cell RNA-sequencing

cancer biology more details view paper
  • Downloaded 4,034 times
  • Download rankings, all-time:
    • Site-wide: 1,206 out of 100,334
    • In cancer biology: 31 out of 3,590
  • Year to date:
    • Site-wide: 6,342 out of 100,334
  • Since beginning of last month:
    • Site-wide: 5,828 out of 100,334

Resolving the Full Spectrum of Human Genome Variation using Linked-Reads

genomics more details view paper
  • Downloaded 3,123 times
  • Download rankings, all-time:
    • Site-wide: 1,894 out of 100,334
    • In genomics: 373 out of 6,222
  • Year to date:
    • Site-wide: 16,424 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

Human-specific NOTCH-like genes in a region linked to neurodevelopmental disorders affect cortical neurogenesis

neuroscience more details view paper
  • Downloaded 2,178 times
  • Download rankings, all-time:
    • Site-wide: 3,467 out of 100,334
    • In neuroscience: 487 out of 17,859
  • Year to date:
    • Site-wide: 18,413 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution

developmental biology more details view paper
  • Downloaded 2,029 times
  • Download rankings, all-time:
    • Site-wide: 3,868 out of 100,334
    • In developmental biology: 62 out of 3,002
  • Year to date:
    • Site-wide: 9,263 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

Comparative Annotation Toolkit (CAT) - simultaneous clade and personal genome annotation

bioinformatics more details view paper
  • Downloaded 1,770 times
  • Download rankings, all-time:
    • Site-wide: 4,872 out of 100,334
    • In bioinformatics: 891 out of 9,219
  • Year to date:
    • Site-wide: 19,748 out of 100,334
  • Since beginning of last month:
    • Site-wide: 8,896 out of 100,334

Multiple laboratory mouse reference genomes define strain specific haplotypes and novel functional loci

genomics more details view paper
  • Downloaded 1,380 times
  • Download rankings, all-time:
    • Site-wide: 7,374 out of 100,334
    • In genomics: 1,127 out of 6,222
  • Year to date:
    • Site-wide: 28,504 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

EquCab3, an Updated Reference Genome for the Domestic Horse

genomics more details view paper
  • Downloaded 1,108 times
  • Download rankings, all-time:
    • Site-wide: 10,652 out of 100,334
    • In genomics: 1,518 out of 6,222
  • Year to date:
    • Site-wide: 27,453 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

Resolving sub-clonal heterogeneity within cell-line growths by single cell sequencing genomic DNA

genomics more details view paper
  • Downloaded 1,106 times
  • Download rankings, all-time:
    • Site-wide: 10,675 out of 100,334
    • In genomics: 1,522 out of 6,222
  • Year to date:
    • Site-wide: 9,168 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

Structurally conserved primate lncRNAs are transiently expressed during human cortical differentiation and influence cell type specific genes

neuroscience more details view paper
  • Downloaded 961 times
  • Download rankings, all-time:
    • Site-wide: 13,364 out of 100,334
    • In neuroscience: 2,142 out of 17,859
  • Year to date:
    • Site-wide: 52,539 out of 100,334
  • Since beginning of last month:
    • Site-wide: 17,827 out of 100,334

The genome of C57BL/6J "Eve", the mother of the laboratory mouse genome reference strain

genomics more details view paper
  • Downloaded 868 times
  • Download rankings, all-time:
    • Site-wide: 15,682 out of 100,334
    • In genomics: 1,996 out of 6,222
  • Year to date:
    • Site-wide: 30,833 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

scHLAcount: Allele-specific HLA expression from single-cell gene expression data

bioinformatics more details view paper
  • Downloaded 656 times
  • Download rankings, all-time:
    • Site-wide: 23,933 out of 100,334
    • In bioinformatics: 3,381 out of 9,219
  • Year to date:
    • Site-wide: 22,757 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

Benchmarking challenging small variants with linked and long reads

genomics more details view paper
  • Downloaded 466 times
  • Download rankings, all-time:
    • Site-wide: 37,267 out of 100,334
    • In genomics: 3,555 out of 6,222
  • Year to date:
    • Site-wide: 6,782 out of 100,334
  • Since beginning of last month:
    • Site-wide: None out of 100,334

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News

  • 20 Oct 2020: Support for sorting preprints using Twitter activity has been removed, at least temporarily, until a new source of social media activity data becomes available.
  • 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
  • 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
  • 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
  • 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
  • 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
  • 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
  • 22 Jan 2019: Nature just published an article about Rxivist and our data.
  • 13 Jan 2019: The Rxivist preprint is live!