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Author: Roberto Amato

Rankings

  • All-time downloads: 34,435 (rank: 6,057 )
  • Categories:
    • bioinformatics: 1,263 (rank: 14,433 (tie) )
    • epidemiology: 1,534 (rank: 8,940 )
    • evolutionary biology: 2,695 (rank: 2,048 (tie) )
    • genetics: 1,181 (rank: 15,732 (tie) )
    • genomics: 3,688 (rank: 7,631 (tie) )
    • infectious diseases: 19,022 (rank: 3,477 (tie) )
    • microbiology: 3,504 (rank: 5,174 (tie) )
    • molecular biology: 663 (rank: 12,565 (tie) )
    • public and global health: 885 (rank: 5,409 (tie) )

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Preprints

Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data

infectious diseases more details view paper
  • Downloaded 17,920 times
  • Download rankings, all-time:
    • Site-wide: 512
    • In infectious diseases: 184
  • Year to date:
    • Site-wide: 155
  • Since beginning of last month:
    • Site-wide: 1,662

FLASH: A next-generation CRISPR diagnostic for multiplexed detection of antimicrobial resistance sequences

microbiology more details view paper
  • Downloaded 2,416 times
  • Download rankings, all-time:
    • Site-wide: 7,559
    • In microbiology: 452
  • Year to date:
    • Site-wide: 94,043
  • Since beginning of last month:
    • Site-wide: 143,032

Genomic epidemiology of the current wave of artemisinin resistant malaria

evolutionary biology more details view paper
  • Downloaded 2,242 times
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    • Site-wide: 8,447
    • In evolutionary biology: 208
  • Year to date:
    • Site-wide: 92,014
  • Since beginning of last month:
    • Site-wide: 115,427

Patterns of within-host genetic diversity in SARS-CoV-2

genomics more details view paper
  • Downloaded 2,013 times
  • Download rankings, all-time:
    • Site-wide: 9,890
    • In genomics: 973
  • Year to date:
    • Site-wide: 3,660
  • Since beginning of last month:
    • Site-wide: 45,531

An open dataset of Plasmodium falciparum genome variation in 7,000 worldwide samples

genomics more details view paper
  • Downloaded 1,675 times
  • Download rankings, all-time:
    • Site-wide: 13,013
    • In genomics: 1,296
  • Year to date:
    • Site-wide: 16,355
  • Since beginning of last month:
    • Site-wide: 105,439

MAJORA: Continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance

bioinformatics more details view paper
  • Downloaded 1,263 times
  • Download rankings, all-time:
    • Site-wide: 20,063
    • In bioinformatics: 2,265
  • Year to date:
    • Site-wide: 8,518
  • Since beginning of last month:
    • Site-wide: 57,319

Genomic epidemiology of COVID-19 in care homes in the East of England

infectious diseases more details view paper
  • Downloaded 1,102 times
  • Download rankings, all-time:
    • Site-wide: 24,701
    • In infectious diseases: 2,295
  • Year to date:
    • Site-wide: 12,821
  • Since beginning of last month:
    • Site-wide: 19,985

Emergence of artemisinin-resistant Plasmodium falciparum with kelch13 C580Y mutations on the island of New Guinea

microbiology more details view paper
  • Downloaded 1,088 times
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    • Site-wide: 25,191
    • In microbiology: 1,471
  • Year to date:
    • Site-wide: 95,065
  • Since beginning of last month:
    • Site-wide: 128,418

Genetic surveillance in the Greater Mekong Subregion and South Asia to support malaria control and elimination

public and global health more details view paper
  • Downloaded 885 times
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    • Site-wide: 34,205
    • In public and global health: 621
  • Year to date:
    • Site-wide: 16,204
  • Since beginning of last month:
    • Site-wide: 17,239

The origins and relatedness structure of mixed infections vary with local prevalence of P. falciparum malaria

epidemiology more details view paper
  • Downloaded 861 times
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    • Site-wide: 35,538
    • In epidemiology: 1,876
  • Year to date:
    • Site-wide: 94,128
  • Since beginning of last month:
    • Site-wide: 46,461

The protective effect of sickle cell haemoglobin against severe malaria depends on parasite genotype

genetics more details view paper
  • Downloaded 707 times
  • Download rankings, all-time:
    • Site-wide: 47,129
    • In genetics: 2,024
  • Year to date:
    • Site-wide: 9,342
  • Since beginning of last month:
    • Site-wide: 13,877

Evolution and expansion of multidrug resistant malaria in Southeast Asia: a genomic epidemiology study

epidemiology more details view paper
  • Downloaded 673 times
  • Download rankings, all-time:
    • Site-wide: 50,502
    • In epidemiology: 2,450
  • Year to date:
    • Site-wide: 143,732
  • Since beginning of last month:
    • Site-wide: 156,777

A molecular barcode and online tool to identify and map imported infection with Plasmodium vivax

molecular biology more details view paper
  • Downloaded 663 times
  • Download rankings, all-time:
    • Site-wide: 51,515
    • In molecular biology: 1,469
  • Year to date:
    • Site-wide: 55,700
  • Since beginning of last month:
    • Site-wide: 51,903

Development of copy number assays for detection and surveillance of piperaquine resistance associated plasmepsin 2/3 copy number variation in Plasmodium falciparum

genetics more details view paper
  • Downloaded 474 times
  • Download rankings, all-time:
    • Site-wide: 77,671
    • In genetics: 3,288
  • Year to date:
    • Site-wide: 132,377
  • Since beginning of last month:
    • Site-wide: 132,475

Origins of the current outbreak of multidrug resistant malaria in Southeast Asia: a retrospective genetic study

evolutionary biology more details view paper
  • Downloaded 453 times
  • Download rankings, all-time:
    • Site-wide: 81,565
    • In evolutionary biology: 4,108
  • Year to date:
    • Site-wide: 163,546
  • Since beginning of last month:
    • Site-wide: 164,533

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