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Author: Ivo G. Gut

Rankings

  • All-time downloads: 36,048 (rank: 962 (tie) out of 359,620)
  • Categories:
    • bioinformatics: 1,606 (rank: 6,573 (tie) out of 31,149)
    • cancer biology: 813 (rank: 5,758 (tie) out of 24,449)
    • developmental biology: 940 (rank: 2,340 (tie) out of 13,998)
    • evolutionary biology: 2,275 (rank: 1,321 (tie) out of 18,657)
    • genetics: 989 (rank: 12,480 (tie) out of 33,813)
    • genomics: 28,966 (rank: 249 out of 38,994)
    • immunology: 459 (rank: 7,756 (tie) out of 18,485)

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Preprints

Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects

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A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

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A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

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pheno-seq - linking morphological features to gene expression in 3D cell culture systems

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GEMBS — high through-put processing for DNA methylation data from Whole Genome Bisulfite Sequencing (WGBS)

bioinformatics more details view paper
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Selective single molecule sequencing and assembly of a human Y chromosome of African origin

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bigSCale: An Analytical Framework for Big-Scale Single-Cell Data

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Tracking of antibiotic resistance transfer and rapid plasmid evolution in a hospital setting by Nanopore sequencing

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Single Cell Transcriptome Conservation in Cryopreserved Cells and Tissues

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Population genomics of Saccharomyces cerevisiae human isolates: passengers, colonizers, invaders.

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Comparative analysis of neutrophil and monocyte epigenomes

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DNA methylation oscillation defines classes of enhancers

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Massive gene presence/absence variation in the mussel genome as an adaptive strategy: first evidence of a pan-genome in Metazoa

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Framework For Quality Assessment Of Whole Genome, Cancer Sequences

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Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation

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Single cell expression analysis uncouples transdifferentiation and reprogramming

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An Approximate Bayesian Computation Approach to Examining the Phylogenetic Relationships among the Four Gibbon Genera using Whole Genome Sequence Data

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Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation

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Genomic adaptations to aquatic and aerial life in mayflies and the origin of wings in insects

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Epigenomic and functional dynamics of human bone marrow myeloid differentiation to mature blood neutrophils

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Transposons played a major role in the diversification between the closely related almond (Prunus dulcis) and peach (P. persica) genomes: Results from the almond genome sequence

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The genome sequence of the octocoral Paramuricea clavata – a key resource to study the impact of climate change in the Mediterranean

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De novo assembly and annotation of the larval transcriptome of two spadefoot toads widely divergent in developmental rate

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Genomic evidence for recurrent genetic admixture during domestication mediterranean olive trees (Olea europaea).

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