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Author: Daniel E. Neafsey

Rankings

  • All-time downloads: 17,073 (rank: 19,166 (tie) )
  • Categories:
    • bioinformatics: 1,316 (rank: 17,584 (tie) )
    • epidemiology: 2,043 (rank: 9,512 (tie) )
    • evolutionary biology: 4,538 (rank: 1,405 )
    • genetics: 1,267 (rank: 17,657 (tie) )
    • genomics: 5,214 (rank: 6,359 )
    • infectious diseases: 1,142 (rank: 35,723 (tie) )
    • microbiology: 1,451 (rank: 17,276 (tie) )

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Preprints

Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control

genomics more details view paper
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Genomic architecture and introgression shape a butterfly radiation

evolutionary biology more details view paper
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    • In evolutionary biology: 131
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Estimating the probable cause of recurrence in Plasmodium vivax malaria: relapse, reinfection or recrudescence?

epidemiology more details view paper
  • Downloaded 2,064 times
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hmmIBD: software to infer pairwise identity by descent between haploid genotypes

bioinformatics more details view paper
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    • In bioinformatics: 2,789
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Design and implementation of multiplexed amplicon sequencing panels to serve genomic epidemiology of infectious disease: a malaria case study

infectious diseases more details view paper
  • Downloaded 903 times
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    • In infectious diseases: 3,650
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Estimating relatedness between malaria parasites

genetics more details view paper
  • Downloaded 827 times
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    • In genetics: 2,090
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Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing

microbiology more details view paper
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    • In microbiology: 4,717
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Plasmodium falciparum population genetic complexity influences transcriptional profile and immune recognition of highly related genotypic clusters

microbiology more details view paper
  • Downloaded 572 times
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    • In microbiology: 5,644
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Longitudinal genomic surveillance of Plasmodium falciparum malaria parasites reveals complex genomic architecture of emerging artemisinin resistance in western Thailand

genomics more details view paper
  • Downloaded 555 times
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A population genomic unveiling of a new cryptic mosquito taxon within the malaria-transmitting Anopheles gambiae complex

evolutionary biology more details view paper
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    • In evolutionary biology: 4,355
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Resolving drug selection and migration in an inbred South American Plasmodium falciparum population with identity-by-descent analysis

evolutionary biology more details view paper
  • Downloaded 491 times
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    • In evolutionary biology: 4,904
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Within-infection diversity of Plasmodium falciparum antigens reflects host-mediated selection

evolutionary biology more details view paper
  • Downloaded 454 times
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    • Site-wide: 115,230
    • In evolutionary biology: 5,301
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Identity-by-descent relatedness estimates with uncertainty characterise departure from isolation-by-distance between Plasmodium falciparum populations on the Colombian-Pacific coast

genetics more details view paper
  • Downloaded 451 times
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    • Site-wide: 116,130
    • In genetics: 4,374
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De Novo Mutations Resolve Disease Transmission Pathways in Clonal Malaria

genomics more details view paper
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    • In genomics: 7,421
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Integration of whole genome sequencing and transcriptomics reveals a complex picture of insecticide resistance in the major malaria vector Anopheles coluzzii

genomics more details view paper
  • Downloaded 350 times
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    • Site-wide: 144,744
    • In genomics: 7,660
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Breadth of humoral immune responses to the C-terminus of the circumsporozoite protein is associated with protective efficacy inducedby the RTS,S malaria vaccine

infectious diseases more details view paper
  • Downloaded 255 times
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    • Site-wide: 173,290
    • In infectious diseases: 7,503
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    • Site-wide: 169,901
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    • Site-wide: 72,120

Population Genomics of Plasmodium vivax in Panama to Assess the Risk of Case Importation on Malaria Elimination

microbiology more details view paper
  • Downloaded 248 times
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    • Site-wide: 175,073
    • In microbiology: 12,882
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