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Author: Seth Blackshaw

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  • All-time downloads: 22,244 (rank: 2,506 out of 396,059)
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    • biochemistry: 1,714 (rank: 1,246 (tie) out of 18,504)
    • bioinformatics: 3,024 (rank: 3,468 (tie) out of 33,591)
    • developmental biology: 5,327 (rank: 130 out of 15,351)
    • genomics: 559 (rank: 26,274 (tie) out of 42,054)
    • neuroscience: 10,575 (rank: 659 out of 66,107)
    • physiology: 1,045 (rank: 436 (tie) out of 8,541)

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Preprints

Comprehensive analysis of retinal development at single cell resolution identifies NFI factors as essential for mitotic exit and specification of late-born cells

developmental biology more details view paper
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Cross-species transcriptomic and epigenomic analysis reveals key regulators of injury response and neuronal regeneration in vertebrate retinas

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The cellular and molecular landscape of hypothalamic patterning and differentiation

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Single-cell analysis of human retina identifies evolutionarily conserved and species-specific mechanisms controlling development.

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Decomposing cell identity for transfer learning across cellular measurements, platforms, tissues, and species.

bioinformatics more details view paper
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A toolbox of immunoprecipitation-grade monoclonal antibodies against human transcription factors.

biochemistry more details view paper
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PanoView: An iterative clustering for single-cell RNA sequencing data

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Ablation of tanycytes of the arcuate nucleus and median eminence increases visceral adiposity and decreases insulin sensitivity in male mice.

physiology more details view paper
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Lhx2 regulates temporal changes in chromatin accessibility and transcription factor binding in retinal progenitor cells.

neuroscience more details view paper
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ASCOT identifies key regulators of neuronal subtype-specific splicing

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A single cell transcriptional atlas of early synovial joint development

developmental biology more details view paper
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A widespread decrease of chromatin accessibility in age-related macular degeneration

genomics more details view paper
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Tanycyte-independent control of hypothalamic leptin signaling

neuroscience more details view paper
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A Clock-Driven Neural Network Critical for Arousal

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NF-κB signaling regulates the formation of proliferating Muller glia-derived progenitor cells in the avian retina.

neuroscience more details view paper
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Ldb1 and Rnf12-dependent regulation of Lhx2 controls the relative balance between neurogenesis and gliogenesis in retina.

neuroscience more details view paper
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Foxd1 is required for terminal differentiation of anterior hypothalamic neuronal subtypes.

developmental biology more details view paper
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Atoh7-independent specification of retinal ganglion cell identity

developmental biology more details view paper
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Canonical Wnt signaling regulates patterning, differentiation and nucleogenesis in mouse hypothalamus and prethalamus.

developmental biology more details view paper
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Gene regulatory networks controlling differentiation, survival, and diversification of hypothalamic Lhx6-expressing GABAergic neurons

neuroscience more details view paper
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Characterization of mWake expression in the murine brain

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