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Author: Valentine Svensson

Rankings

  • All-time downloads: 37,896 (rank: 923 out of 365,224)
  • Categories:
    • bioinformatics: 10,350 (rank: 505 out of 31,516)
    • developmental biology: 1,817 (rank: 873 (tie) out of 14,071)
    • genomics: 18,698 (rank: 466 out of 39,329)
    • immunology: 1,739 (rank: 1,607 (tie) out of 19,063)
    • neuroscience: 2,459 (rank: 5,743 (tie) out of 61,242)
    • systems biology: 2,833 (rank: 849 (tie) out of 10,847)

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Preprints

Power Analysis of Single Cell RNA‐Sequencing Experiments

genomics more details view paper
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    • In genomics: 53 out of 5,475
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    • Site-wide: 19,370 out of 84,910
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    • Site-wide: 14,299 out of 84,910

Droplet scRNA-seq is not zero-inflated

bioinformatics more details view paper
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    • In bioinformatics: 163 out of 8,136
  • Year to date:
    • Site-wide: 1,538 out of 84,910
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    • Site-wide: 3,552 out of 84,910

A curated database reveals trends in single-cell transcriptomics

genomics more details view paper
  • Downloaded 3,590 times
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    • In genomics: 278 out of 5,475
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    • Site-wide: 1,295 out of 84,910
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    • Site-wide: 1,682 out of 84,910

Interpretable factor models of single-cell RNA-seq via variational autoencoders

bioinformatics more details view paper
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    • In bioinformatics: 238 out of 8,136
  • Year to date:
    • Site-wide: 1,273 out of 84,910
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    • Site-wide: 3,292 out of 84,910

SpatialDE - Identification of spatially variable genes

genomics more details view paper
  • Downloaded 2,890 times
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    • Site-wide: 1,840 out of 84,910
    • In genomics: 372 out of 5,475
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    • Site-wide: 22,670 out of 84,910
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    • Site-wide: 26,805 out of 84,910

Temporal mixture modelling of single-cell RNA-seq data resolves a CD4+ T cell fate bifurcation

systems biology more details view paper
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    • Site-wide: 1,901 out of 84,910
    • In systems biology: 48 out of 2,235
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    • Site-wide: 36,034 out of 84,910
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    • Site-wide: 44,628 out of 84,910

Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq

genomics more details view paper
  • Downloaded 2,638 times
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    • Site-wide: 2,138 out of 84,910
    • In genomics: 424 out of 5,475
  • Year to date:
    • Site-wide: 3,639 out of 84,910
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    • Site-wide: 4,773 out of 84,910

RNA velocity and protein acceleration from single-cell multiomics experiments

bioinformatics more details view paper
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    • In bioinformatics: 411 out of 8,136
  • Year to date:
    • Site-wide: 9,885 out of 84,910
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    • Site-wide: 15,021 out of 84,910

An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

neuroscience more details view paper
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    • In neuroscience: 338 out of 15,117
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    • Site-wide: 337 out of 84,910
  • Since beginning of last month:
    • Site-wide: 1,006 out of 84,910

Single-cell transcriptomics identifies CD44 as a new marker and regulator of haematopoietic stem cells development

developmental biology more details view paper
  • Downloaded 1,817 times
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    • Site-wide: 4,024 out of 84,910
    • In developmental biology: 65 out of 2,534
  • Year to date:
    • Site-wide: 11,975 out of 84,910
  • Since beginning of last month:
    • Site-wide: 11,226 out of 84,910

Transcriptome Dynamics Reveals Progressive Transition from Effector to Memory in CD4+ T cells.

immunology more details view paper
  • Downloaded 1,511 times
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    • Site-wide: 5,462 out of 84,910
    • In immunology: 123 out of 2,384
  • Year to date:
    • Site-wide: 11,804 out of 84,910
  • Since beginning of last month:
    • Site-wide: 24,574 out of 84,910

Single-cell transcriptomics of allo-reactive CD4+ T cells over time reveals divergent fates during gut GVHD

immunology more details view paper
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    • Site-wide: 61,135 out of 84,910
    • In immunology: 1,582 out of 2,384
  • Year to date:
    • Site-wide: 9,880 out of 84,910
  • Since beginning of last month:
    • Site-wide: 15,178 out of 84,910

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