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Author: Trygve E. Bakken

Rankings

  • All-time downloads: 59,210 (rank: 3,894 )
  • Categories:
    • bioinformatics: 1,855 (rank: 10,171 (tie) )
    • evolutionary biology: 627 (rank: 14,532 (tie) )
    • genetics: 1,061 (rank: 17,875 (tie) )
    • genomics: 8,247 (rank: 3,085 )
    • neuroscience: 45,177 (rank: 90 )

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Preprints

Shared and distinct transcriptomic cell types across neocortical areas

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Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

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    • Site-wide: 1,937
    • In neuroscience: 87
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Conserved cell types with divergent features between human and mouse cortex

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    • In neuroscience: 95
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A multimodal cell census and atlas of the mammalian primary motor cortex

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Single nucleus multi-omics links human cortical cell regulatory genome diversity to disease risk variants

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Equivalent high-resolution identification of neuronal cell types with single-nucleus and single-cell RNA-sequencing

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    • Site-wide: 4,174
    • In neuroscience: 288
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Genetic Identification Of Brain Cell Types Underlying Schizophrenia

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    • Site-wide: 4,858
    • In genomics: 431
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Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type

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  • Downloaded 3,304 times
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    • Site-wide: 5,687
    • In neuroscience: 414
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Single-Cell Transcriptomic Evidence for Dense Intracortical Neuropeptide Networks

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Human cortical expansion involves diversification and specialization of supragranular intratelencephalic-projecting neurons

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Oligodendrocyte precursor cells prune axons in the mouse neocortex

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    • Site-wide: 9,444
    • In neuroscience: 1,089
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Integrated gene analyses of de novo mutations from 46,612 trios with autism and developmental disorders

genetics more details view paper
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    • In genetics: 1,207
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The Markov link method: a nonparametric approach to combine observations from multiple experiments

bioinformatics more details view paper
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    • Site-wide: 23,012
    • In bioinformatics: 2,370
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    • Site-wide: 114,818
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Single-cell RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates and humans

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    • Site-wide: 23,094
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Parallel RNA and DNA analysis after Deep-sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain

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    • Site-wide: 34,632
    • In neuroscience: 4,119
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h-channels contribute to divergent electrophysiological properties of supragranular pyramidal neurons in human versus mouse cerebral cortex

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  • Downloaded 891 times
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    • Site-wide: 40,448
    • In neuroscience: 4,946
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Structural and cellular transcriptome foundations of human brain disease

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  • Downloaded 767 times
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    • Site-wide: 50,485
    • In neuroscience: 10,672
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    • Site-wide: 15,100
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Identification of genetic markers for cortical areas using a Random Forest classification routine and the Allen Mouse Brain Atlas

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    • Site-wide: 50,532
    • In neuroscience: 6,486
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Origin of a novel CYP20A1 transcript isoform through multiple Alu exaptations creates a potential miRNA sponge

evolutionary biology more details view paper
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    • Site-wide: 62,718
    • In evolutionary biology: 2,837
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    • Site-wide: 100,191
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NS-Forest: A machine learning method for the objective identification of minimum marker gene combinations for cell type determination from single cell RNA sequencing

bioinformatics more details view paper
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    • Site-wide: 65,653
    • In bioinformatics: 6,280
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